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Spg006237 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006237
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationscaffold4:6028939..6029355
RNA-Seq ExpressionSpg006237
SyntenySpg006237
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647336.1 hypothetical protein Csa_003380 [Cucumis sativus]6.8e-5889.86Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK
        MSVEILDSATIVNFVED+ AFGAFIRDRFAHLDTN DGLLSYSEMLEEL +LRVF+T F IDV+PDPDEL SSVYSSLFLQFDRDSSG VDLDEF+AE K
Subjt:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK

Query:  RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

XP_008449396.1 PREDICTED: uncharacterized protein LOC103491294 [Cucumis melo]2.0e-5789.13Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK
        MSVEILDSATIVNFVED+ AFGAFIRDRFAHLDTNHDGLLSYSEMLEEL +LRVF+T F IDV+PDP+EL SSVYSSLFLQFD DSSG VDLDEFKAE K
Subjt:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK

Query:  RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        RMML MANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

XP_011657544.1 uncharacterized protein LOC105435869 [Cucumis sativus]6.8e-5889.86Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK
        MSVEILDSATIVNFVED+ AFGAFIRDRFAHLDTN DGLLSYSEMLEEL +LRVF+T F IDV+PDPDEL SSVYSSLFLQFDRDSSG VDLDEF+AE K
Subjt:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK

Query:  RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

XP_022135623.1 uncharacterized protein LOC111007532 [Momordica charantia]4.4e-5789.13Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK
        MSVEILDSATIVNFVEDEAAF AFIRDRFAHLDTNHDGLLSY+EML ELQSLRVF+  F IDV+PDPDEL S+VYSSLFLQFD DSSG VDLDEFKAE K
Subjt:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK

Query:  RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        RMMLA ANGMGFLPVQMVLEEGSFLMKAVERET IMAA
Subjt:  RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

XP_038888297.1 uncharacterized protein LOC120078146 [Benincasa hispida]4.0e-5889.86Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK
        MSVEILDSATIVNFVED+ AFGAFIRDRFAHLDTNHDGLLSY+EMLEEL +LRVF+T F IDV+PDPDEL SSVYSSLFLQFDRDSSG VDLDEF AE K
Subjt:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK

Query:  RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        RMML MANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
Subjt:  RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

TrEMBL top hitse value%identityAlignment
A0A0A0KHT7 Uncharacterized protein3.3e-5889.86Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK
        MSVEILDSATIVNFVED+ AFGAFIRDRFAHLDTN DGLLSYSEMLEEL +LRVF+T F IDV+PDPDEL SSVYSSLFLQFDRDSSG VDLDEF+AE K
Subjt:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK

Query:  RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

A0A1S3BLY5 uncharacterized protein LOC1034912949.6e-5889.13Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK
        MSVEILDSATIVNFVED+ AFGAFIRDRFAHLDTNHDGLLSYSEMLEEL +LRVF+T F IDV+PDP+EL SSVYSSLFLQFD DSSG VDLDEFKAE K
Subjt:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK

Query:  RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        RMML MANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

A0A5D3E445 Calcium-binding EF-hand family protein9.6e-5889.13Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK
        MSVEILDSATIVNFVED+ AFGAFIRDRFAHLDTNHDGLLSYSEMLEEL +LRVF+T F IDV+PDP+EL SSVYSSLFLQFD DSSG VDLDEFKAE K
Subjt:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK

Query:  RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        RMML MANGMGFLPVQMVLEEGSFLMKAVERETAI AA
Subjt:  RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

A0A6J1C5B4 uncharacterized protein LOC1110075322.1e-5789.13Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK
        MSVEILDSATIVNFVEDEAAF AFIRDRFAHLDTNHDGLLSY+EML ELQSLRVF+  F IDV+PDPDEL S+VYSSLFLQFD DSSG VDLDEFKAE K
Subjt:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK

Query:  RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA
        RMMLA ANGMGFLPVQMVLEEGSFLMKAVERET IMAA
Subjt:  RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIMAA

A0A6J1JN55 uncharacterized protein LOC1114861982.8e-5789.71Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK
        MSVEILDSATIVNFVEDEAAFGAFI DRFAHLDTNHDGLLSYSEML+ELQSLRV + DF IDV+PDPDEL SSVYSS+FLQFDR+SSG VDLDEFKAENK
Subjt:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK

Query:  RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIM
        RMMLAMANG+G LPVQMVLEEGSFLMKAVERE AIM
Subjt:  RMMLAMANGMGFLPVQMVLEEGSFLMKAVERETAIM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein1.8e-0828.68Show/hide
Query:  ILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENKRMML
        ++ S T++ F+ D  +F +   D F  LD + +G+LS SE+ + L ++        ++ E  P + + +VY+++F +F  D    +    F+     ++ 
Subjt:  ILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENKRMML

Query:  AMANGMGFLPVQMVLEEGSFLMKAVERET
        AMA G+G  PV MV+     +MKAV  E+
Subjt:  AMANGMGFLPVQMVLEEGSFLMKAVERET

AT2G44310.1 Calcium-binding EF-hand family protein3.6e-2542.65Show/hide
Query:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK
        M V ++D +T+ +FV+DE  F   + +RFA LD N DG+LS SE+ +  +S+R+ ++ F +DV    DEL +++Y S+F +FD D SG VDL+EF++E K
Subjt:  MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENK

Query:  RMMLAMANGMGFLPVQMVL--EEGSFLMKAVERETA
        +++LA+A+G+G  P+ MVL  ++ +FL KA + E +
Subjt:  RMMLAMANGMGFLPVQMVL--EEGSFLMKAVERETA

AT4G38810.2 Calcium-binding EF-hand family protein3.4e-0728.57Show/hide
Query:  EILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENKRMM
        ++LD + IV  VE+E  F  F+  +F  LD + DG LS +E+   +  +            PD D     +YS +  +F   S   V   EFK     ++
Subjt:  EILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENKRMM

Query:  LAMANGMGFLPVQMVLEEGSFLMKAV
        L MA G+   P+ ++  +G  L + V
Subjt:  LAMANGMGFLPVQMVLEEGSFLMKAV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGTGGAGATATTGGACAGTGCGACGATAGTCAACTTCGTCGAAGATGAGGCAGCTTTTGGTGCATTCATAAGAGACCGGTTTGCTCATCTCGACACCAACCATGA
TGGTCTCCTTTCCTACAGTGAGATGTTGGAGGAGTTGCAGAGTCTCAGGGTCTTCAAGACCGATTTCGAGATCGATGTGGAGCCTGATCCGGATGAGCTCTCTTCTTCTG
TCTATAGTTCTCTGTTTTTGCAGTTTGATCGTGACTCGAGTGGAATGGTTGATCTGGATGAGTTTAAGGCTGAGAACAAAAGGATGATGCTAGCTATGGCTAATGGGATG
GGTTTCTTACCTGTTCAGATGGTGCTGGAAGAGGGAAGCTTCTTGATGAAGGCTGTTGAGAGAGAAACTGCAATAATGGCCGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGTGGAGATATTGGACAGTGCGACGATAGTCAACTTCGTCGAAGATGAGGCAGCTTTTGGTGCATTCATAAGAGACCGGTTTGCTCATCTCGACACCAACCATGA
TGGTCTCCTTTCCTACAGTGAGATGTTGGAGGAGTTGCAGAGTCTCAGGGTCTTCAAGACCGATTTCGAGATCGATGTGGAGCCTGATCCGGATGAGCTCTCTTCTTCTG
TCTATAGTTCTCTGTTTTTGCAGTTTGATCGTGACTCGAGTGGAATGGTTGATCTGGATGAGTTTAAGGCTGAGAACAAAAGGATGATGCTAGCTATGGCTAATGGGATG
GGTTTCTTACCTGTTCAGATGGTGCTGGAAGAGGGAAGCTTCTTGATGAAGGCTGTTGAGAGAGAAACTGCAATAATGGCCGCTTGA
Protein sequenceShow/hide protein sequence
MSVEILDSATIVNFVEDEAAFGAFIRDRFAHLDTNHDGLLSYSEMLEELQSLRVFKTDFEIDVEPDPDELSSSVYSSLFLQFDRDSSGMVDLDEFKAENKRMMLAMANGM
GFLPVQMVLEEGSFLMKAVERETAIMAA