CuGenDBv2

Gene ID	Spg006252
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Histidine kinase
Genome location	scaffold4:4605443..4605868
RNA-Seq Expression	Spg006252
Synteny	Spg006252
Gene Ontology terms	GO:0000160 - phosphorelay signal transduction system (biological process) GO:0006950 - response to stress (biological process) GO:0009628 - response to abiotic stimulus (biological process) GO:0009736 - cytokinin-activated signaling pathway (biological process) GO:0018106 - peptidyl-histidine phosphorylation (biological process) GO:0048856 - anatomical structure development (biological process) GO:0050793 - regulation of developmental process (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0000155 - phosphorelay sensor kinase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6589107.1 Histidine kinase 2, partial [Cucurbita argyrosperma subsp. sororia]

1.0e-40

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Query:  MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQ
        MSQNSK S S V LPAG KAKRA+EHFHGQRWSNLLYLLP G+IL++GLW I SLC GNSVRE E+PDTCKEKAW+LLKH+NVSESQFHALASFFFHSDQ
Subjt:  MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQ

Query:  VLFLE
           L+
Subjt:  VLFLE

KAG7022815.1 Histidine kinase 2 [Cucurbita argyrosperma subsp. argyrosperma]

1.0e-40

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Query:  MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQ
        MSQNSK S S V LPAG KAKRA+EHFHGQRWSNLLYLLP G+IL++GLW I SLC GNSVRE E+PDTCKEKAW+LLKH+NVSESQFHALASFFFHSDQ
Subjt:  MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQ

Query:  VLFLE
           L+
Subjt:  VLFLE

XP_022928257.1 histidine kinase 2 isoform X1 [Cucurbita moschata]

1.0e-40

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Query:  MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQ
        MSQNSK S S V LPAG KAKRA+EHFHGQRWSNLLYLLP G+IL++GLW I SLC GNSVRE E+PDTCKEKAW+LLKH+NVSESQFHALASFFFHSDQ
Subjt:  MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQ

Query:  VLFLE
           L+
Subjt:  VLFLE

XP_022928260.1 histidine kinase 2 isoform X2 [Cucurbita moschata]

1.0e-40

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Query:  MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQ
        MSQNSK S S V LPAG KAKRA+EHFHGQRWSNLLYLLP G+IL++GLW I SLC GNSVRE E+PDTCKEKAW+LLKH+NVSESQFHALASFFFHSDQ
Subjt:  MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQ

Query:  VLFLE
           L+
Subjt:  VLFLE

XP_023529579.1 histidine kinase 2-like [Cucurbita pepo subsp. pepo]

2.9e-40

79.05

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Query:  MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQ
        MSQNSK S S V LPAG KAKRA+EHFHGQRWSNLLYLLP G+IL++GLW I SLC GNS RE E+PDTCKEKAW+LLKH+NVSESQFHALASFFFHSDQ
Subjt:  MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQ

Query:  VLFLE
           L+
Subjt:  VLFLE

TrEMBL top hits

e value

%identity

Alignment

A0A6J1C2P9 Histidine kinase

1.1e-35

74.29

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Query:  MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQ
        MSQNSKF  SKVRLPAGF+AKRAKE FHGQRWSNLLYLLP G+IL+LGLWS+FS C  NSV E  +PD C+EKA +LL+HFNVSESQ HALAS FF+SDQ
Subjt:  MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQ

Query:  VLFLE
           L+
Subjt:  VLFLE

A0A6J1EJE1 Histidine kinase

4.9e-41

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Query:  MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQ
        MSQNSK S S V LPAG KAKRA+EHFHGQRWSNLLYLLP G+IL++GLW I SLC GNSVRE E+PDTCKEKAW+LLKH+NVSESQFHALASFFFHSDQ
Subjt:  MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQ

Query:  VLFLE
           L+
Subjt:  VLFLE

A0A6J1ER81 Histidine kinase

4.9e-41

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Query:  MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQ
        MSQNSK S S V LPAG KAKRA+EHFHGQRWSNLLYLLP G+IL++GLW I SLC GNSVRE E+PDTCKEKAW+LLKH+NVSESQFHALASFFFHSDQ
Subjt:  MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQ

Query:  VLFLE
           L+
Subjt:  VLFLE

A0A6J1JNY0 Histidine kinase

5.6e-37

76.19

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Query:  MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQ
        MSQNSK S S V LPAGFKAKRA+EHFHGQR SNLLY LP G+IL++GL  I SLC GNSVRE E+PDTCKEKAW++LKH+NVSESQFHALASFF HSDQ
Subjt:  MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQ

Query:  VLFLE
           L+
Subjt:  VLFLE

A0A6J1JPU8 Histidine kinase

5.6e-37

76.19

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Query:  MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQ
        MSQNSK S S V LPAGFKAKRA+EHFHGQR SNLLY LP G+IL++GL  I SLC GNSVRE E+PDTCKEKAW++LKH+NVSESQFHALASFF HSDQ
Subjt:  MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQ

Query:  VLFLE
           L+
Subjt:  VLFLE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGTCTCAGAATTCTAAGTTCTCTTATTCTAAGGTCAGATTACCCGCTGGGTTCAAGGCGAAGAGGGCCAAGGAGCATTTCCATGGCCAGCGGTGGAGTAACCTTCTTTA
TCTCTTGCCATTGGGCTTAATTTTGGTTCTGGGTCTTTGGTCTATTTTTAGTCTTTGTGGTGGGAATTCAGTTCGGGAAAGGGAGCTTCCCGATACGTGTAAAGAGAAGG
CCTGGAGCTTGCTGAAGCATTTCAATGTCAGCGAGAGTCAGTTTCATGCTTTGGCTTCATTCTTCTTTCATTCAGATCAGGTACTCTTTCTTGAGCTCTCTCACTATTTG
ATCTTACTTTCTCTTCCTAGATGTTTCCAATCACGAGCTTTCAACTTTCCTCAAGATAAGAGTACAGCTCGTGATGATAATGGCTATATGCGATGA

mRNA sequence

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Protein sequence

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MSQNSKFSYSKVRLPAGFKAKRAKEHFHGQRWSNLLYLLPLGLILVLGLWSIFSLCGGNSVRERELPDTCKEKAWSLLKHFNVSESQFHALASFFFHSDQVLFLELSHYL
ILLSLPRCFQSRAFNFPQDKSTARDDNGYMR

Spg006252 (gene) of Sponge gourd (cylindrica) v1 genome