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Spg006266 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006266
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationscaffold4:3770580..3770993
RNA-Seq ExpressionSpg006266
SyntenySpg006266
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589130.1 hypothetical protein SDJN03_17695, partial [Cucurbita argyrosperma subsp. sororia]8.0e-5987.41Show/hide
Query:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK
        MSVEILD ATIVNFVED+EVFGA VRERFSHLDID DGVLSY EMLRELQSLRVFETHFGIDVKPDP+E SSVYGSLFLQFD+DCNGKVD+ EFM ETKK
Subjt:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK

Query:  MMLAMANGIGFSPVQMALEENSFLKKAVDRESTRV
        MM+AMANGIGFSPVQM LEENS LK+AV+REST+V
Subjt:  MMLAMANGIGFSPVQMALEENSFLKKAVDRESTRV

XP_008455503.1 PREDICTED: uncharacterized protein LOC103495655 [Cucumis melo]6.1e-5986.76Show/hide
Query:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK
        MSVEILDSATIVNFVEDEE F   +RERFSHLD+DRDGVL YGEML+ELQSLRVFETHFGID KPDP E SSVY SLFLQFD+DCNGKVDL EFMAETKK
Subjt:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK

Query:  MMLAMANGIGFSPVQMALEENSFLKKAVDRESTRVA
        MMLAMANGIG SPVQM LEENSFLKKAVDREST++A
Subjt:  MMLAMANGIGFSPVQMALEENSFLKKAVDRESTRVA

XP_022930660.1 uncharacterized protein LOC111437061 [Cucurbita moschata]9.5e-6088.89Show/hide
Query:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK
        MSVEILDSATIVNFVED+EVFGA VRERFSHLDID DGVLSY EMLRELQSLRVFETHFGIDVKPDP+E SSVYGSLFLQFD+DC+GKVD+ EFM ETKK
Subjt:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK

Query:  MMLAMANGIGFSPVQMALEENSFLKKAVDRESTRV
        MM+AMANGIGFSPVQM LEENSFLKKAV+REST+V
Subjt:  MMLAMANGIGFSPVQMALEENSFLKKAVDRESTRV

XP_023529817.1 uncharacterized protein LOC111792531 [Cucurbita pepo subsp. pepo]1.8e-5888.15Show/hide
Query:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK
        MSVEILD ATIVNFVED+EVFGA VRERFSHLDID DGVLSY EMLRELQSLRVFETHFGIDVKPDP+E SSVYGSLFLQFD+D NGKVD+ EFM ETKK
Subjt:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK

Query:  MMLAMANGIGFSPVQMALEENSFLKKAVDRESTRV
        MM+AMANGIGFSPVQM LEENSFLKKAV+REST+V
Subjt:  MMLAMANGIGFSPVQMALEENSFLKKAVDRESTRV

XP_038888629.1 uncharacterized protein LOC120078427 [Benincasa hispida]2.1e-5986.76Show/hide
Query:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK
        MSVEILDSATIVNFVEDEE F  ++RERFSHLD+DRDGVL YGEML+ELQSLRV ETHFGID KPDP+E SSVYGSLF QFD+DCNGKVDL EFMAETKK
Subjt:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK

Query:  MMLAMANGIGFSPVQMALEENSFLKKAVDRESTRVA
        MMLAMANGIGFSPVQM LEENSFLKKAVDREST++A
Subjt:  MMLAMANGIGFSPVQMALEENSFLKKAVDRESTRVA

TrEMBL top hitse value%identityAlignment
A0A0A0K1Y0 Calcium ion binding protein4.3e-5885.29Show/hide
Query:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK
        MSVEIL+SATI+NFVEDEE F   +RERFSHLDIDRDGVL YGEML+ELQSLRV ETHFGID KPDP E SSVYGSLFLQFD+DCNGKVDL EFM ETKK
Subjt:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK

Query:  MMLAMANGIGFSPVQMALEENSFLKKAVDRESTRVA
        MMLAMANGIG SPVQM LEENSFLKKAVDREST++A
Subjt:  MMLAMANGIGFSPVQMALEENSFLKKAVDRESTRVA

A0A1S3C1T0 uncharacterized protein LOC1034956553.0e-5986.76Show/hide
Query:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK
        MSVEILDSATIVNFVEDEE F   +RERFSHLD+DRDGVL YGEML+ELQSLRVFETHFGID KPDP E SSVY SLFLQFD+DCNGKVDL EFMAETKK
Subjt:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK

Query:  MMLAMANGIGFSPVQMALEENSFLKKAVDRESTRVA
        MMLAMANGIG SPVQM LEENSFLKKAVDREST++A
Subjt:  MMLAMANGIGFSPVQMALEENSFLKKAVDRESTRVA

A0A5D3DDG8 Calcium-binding EF-hand family protein3.0e-5986.76Show/hide
Query:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK
        MSVEILDSATIVNFVEDEE F   +RERFSHLD+DRDGVL YGEML+ELQSLRVFETHFGID KPDP E SSVY SLFLQFD+DCNGKVDL EFMAETKK
Subjt:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK

Query:  MMLAMANGIGFSPVQMALEENSFLKKAVDRESTRVA
        MMLAMANGIG SPVQM LEENSFLKKAVDREST++A
Subjt:  MMLAMANGIGFSPVQMALEENSFLKKAVDRESTRVA

A0A6J1C2G7 uncharacterized protein LOC1110078493.3e-5884.56Show/hide
Query:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK
        MSVE+LD ATIV+FVEDEEVFGATV+ERFSHLD DRDGVLSYGEMLRELQSLRV ETHFGIDVKPDP+E S+VYGSLFL FD+DCNGKVDL EFMAETKK
Subjt:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK

Query:  MMLAMANGIGFSPVQMALEENSFLKKAVDRESTRVA
        MMLAMANGIG  P+QM LEEN FLKKAV+RE+T++A
Subjt:  MMLAMANGIGFSPVQMALEENSFLKKAVDRESTRVA

A0A6J1EXF9 uncharacterized protein LOC1114370614.6e-6088.89Show/hide
Query:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK
        MSVEILDSATIVNFVED+EVFGA VRERFSHLDID DGVLSY EMLRELQSLRVFETHFGIDVKPDP+E SSVYGSLFLQFD+DC+GKVD+ EFM ETKK
Subjt:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK

Query:  MMLAMANGIGFSPVQMALEENSFLKKAVDRESTRV
        MM+AMANGIGFSPVQM LEENSFLKKAV+REST+V
Subjt:  MMLAMANGIGFSPVQMALEENSFLKKAVDRESTRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein1.5e-1031.25Show/hide
Query:  ILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKKMMLA
        ++ S T++ F+ D + F +   + F  LD+D++G+LS  E+ + L ++   E+    +V P  +E  +VY ++F +F +D   K     F     +++ A
Subjt:  ILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKKMMLA

Query:  MANGIGFSPVQMALEENSFLKKAVDRES
        MA GIG SPV M +  +  + KAV  ES
Subjt:  MANGIGFSPVQMALEENSFLKKAVDRES

AT2G44310.1 Calcium-binding EF-hand family protein2.9e-3044.53Show/hide
Query:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK
        M V ++D +T+ +FV+DEE F  +V ERF+ LD+++DGVLS  E+ +  +S+R+ E+HFG+DV    +E +++Y S+F +FD D +G VDL EF +E KK
Subjt:  MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKK

Query:  MMLAMANGIGFSPVQMAL--EENSFLKKAVDRESTRV
        ++LA+A+G+G  P+ M L  ++++FLKKA D E++++
Subjt:  MMLAMANGIGFSPVQMAL--EENSFLKKAVDRESTRV

AT4G38810.2 Calcium-binding EF-hand family protein1.2e-0727.93Show/hide
Query:  EILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKKMML
        ++LD + IV  VE+E+VF   V ++F  LD D DG LS  E+   +  +       G+  +    +   +Y  +  +F      KV   EF      ++L
Subjt:  EILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKKMML

Query:  AMANGIGFSPV
         MA G+   P+
Subjt:  AMANGIGFSPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTAGAAATCTTGGACAGTGCCACCATTGTCAACTTTGTGGAAGATGAAGAAGTTTTCGGTGCGACGGTCAGAGAGCGTTTCAGTCACCTCGACATCGATAGAGA
TGGCGTTCTTTCTTATGGCGAGATGTTGAGAGAGTTGCAGAGTCTTAGAGTGTTCGAGACTCATTTCGGAATAGATGTGAAACCTGACCCCGAAGAGTTTTCTTCGGTTT
ATGGCTCGTTATTTTTGCAGTTTGATCAGGACTGCAATGGAAAAGTTGATCTATGCGAGTTCATGGCTGAAACCAAGAAGATGATGCTGGCGATGGCCAATGGGATAGGG
TTTTCGCCCGTTCAAATGGCGCTCGAAGAAAACAGTTTTTTGAAGAAAGCAGTCGACAGAGAATCCACTAGAGTCGCTACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCGTAGAAATCTTGGACAGTGCCACCATTGTCAACTTTGTGGAAGATGAAGAAGTTTTCGGTGCGACGGTCAGAGAGCGTTTCAGTCACCTCGACATCGATAGAGA
TGGCGTTCTTTCTTATGGCGAGATGTTGAGAGAGTTGCAGAGTCTTAGAGTGTTCGAGACTCATTTCGGAATAGATGTGAAACCTGACCCCGAAGAGTTTTCTTCGGTTT
ATGGCTCGTTATTTTTGCAGTTTGATCAGGACTGCAATGGAAAAGTTGATCTATGCGAGTTCATGGCTGAAACCAAGAAGATGATGCTGGCGATGGCCAATGGGATAGGG
TTTTCGCCCGTTCAAATGGCGCTCGAAGAAAACAGTTTTTTGAAGAAAGCAGTCGACAGAGAATCCACTAGAGTCGCTACTTAG
Protein sequenceShow/hide protein sequence
MSVEILDSATIVNFVEDEEVFGATVRERFSHLDIDRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPEEFSSVYGSLFLQFDQDCNGKVDLCEFMAETKKMMLAMANGIG
FSPVQMALEENSFLKKAVDRESTRVAT