CuGenDBv2

Gene ID	Spg006270
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	glucosidase 2 subunit beta
Genome location	scaffold4:6282788..6285901
RNA-Seq Expression	Spg006270
Synteny	Spg006270
Gene Ontology terms	GO:0006491 - N-glycan processing (biological process) GO:0016021 - integral component of membrane (cellular component) GO:0017177 - glucosidase II complex (cellular component)
InterPro domains	IPR028146 - Glucosidase II beta subunit, N-terminal IPR039794 - Glucosidase II beta subunit-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6572276.1 Glucosidase 2 subunit beta, partial [Cucurbita argyrosperma subsp. sororia]

2.4e-77

82.94

Show/hide

Query:  MEAG------SFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSS
        MEAG      SF+ LL  CFFFASV SVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDC+DGTDEPGTSACARGKFYCRNMGSTPRF+FSS
Subjt:  MEAG------SFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSS

Query:  RVNDRICDCCDGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTR
        RVND ICDCCDGSDEYD N+FCPNTCVMGGN AYK++ YIST+RDV+++NRKVKEEITKEDLF +L+G +
Subjt:  RVNDRICDCCDGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTR

XP_022136263.1 glucosidase 2 subunit beta [Momordica charantia]

9.2e-82

87.65

Show/hide

Query:  MEAG------SFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSS
        MEAG      SF+S++ ICFFFASV SVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDC+DGTDEPGTSACARGKFYCRNMGSTP+FIFSS
Subjt:  MEAG------SFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSS

Query:  RVNDRICDCCDGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTR
         VNDRICDCCDGSDEYD N+FCPNTCVMGGNIAYKSNNYISTT+DV++VNRKVKEEITKEDLFQKLMG +
Subjt:  RVNDRICDCCDGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTR

XP_022952390.1 glucosidase 2 subunit beta [Cucurbita moschata]

2.4e-77

82.94

Show/hide

Query:  MEAG------SFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSS
        MEAG      SF+ LL  CFFFASV SVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDC+DGTDEPGTSACARGKFYCRNMGSTPRF+FSS
Subjt:  MEAG------SFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSS

Query:  RVNDRICDCCDGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTR
        RVND ICDCCDGSDEYD N+FCPNTCVMGGN AYK++ YIST+RDV+++NRKVKEEITKEDLF +L+G +
Subjt:  RVNDRICDCCDGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTR

XP_022969237.1 glucosidase 2 subunit beta [Cucurbita maxima]

2.4e-77

82.94

Show/hide

Query:  MEAG------SFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSS
        MEAG      SF+ LL  CFFFASV SVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDC+DGTDEPGTSACARGKFYCRNMGSTPRF+FSS
Subjt:  MEAG------SFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSS

Query:  RVNDRICDCCDGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTR
        RVND ICDCCDGSDEYD N+FCPNTCVMGGN AYK++ YIST+RDV+++NRKVKEEITKEDLF +L+G +
Subjt:  RVNDRICDCCDGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTR

XP_023554618.1 glucosidase 2 subunit beta [Cucurbita pepo subsp. pepo]

2.4e-77

82.94

Show/hide

Query:  MEAG------SFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSS
        MEAG      SF+ LL  CFFFASV SVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDC+DGTDEPGTSACARGKFYCRNMGSTPRF+FSS
Subjt:  MEAG------SFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSS

Query:  RVNDRICDCCDGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTR
        RVND ICDCCDGSDEYD N+FCPNTCVMGGN AYK++ YIST+RDV+++NRKVKEEITKEDLF +L+G +
Subjt:  RVNDRICDCCDGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTR

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E0C8 glucosidase 2 subunit beta isoform X1

1.5e-74

Show/hide

Query:  SFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDRICDCC
        SF+SLL IC FF SV + PS +GVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDC+DGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVND ICDCC
Subjt:  SFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDRICDCC

Query:  DGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTR
        DGSDEY+ N+FCPNTCVMGGN+ YKSNN +STTRDV++V RKVKEEITKEDLFQKL G +
Subjt:  DGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTR

A0A5D3BIQ3 Glucosidase 2 subunit beta isoform X1

1.5e-74

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Query:  SFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDRICDCC
        SF+SLL IC FF SV + PS +GVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDC+DGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVND ICDCC
Subjt:  SFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDRICDCC

Query:  DGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTR
        DGSDEY+ N+FCPNTCVMGGN+ YKSNN +STTRDV++V RKVKEEITKEDLFQKL G +
Subjt:  DGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTR

A0A6J1C765 glucosidase 2 subunit beta

4.5e-82

87.65

Show/hide

Query:  MEAG------SFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSS
        MEAG      SF+S++ ICFFFASV SVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDC+DGTDEPGTSACARGKFYCRNMGSTP+FIFSS
Subjt:  MEAG------SFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSS

Query:  RVNDRICDCCDGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTR
         VNDRICDCCDGSDEYD N+FCPNTCVMGGNIAYKSNNYISTT+DV++VNRKVKEEITKEDLFQKLMG +
Subjt:  RVNDRICDCCDGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTR

A0A6J1GLM3 glucosidase 2 subunit beta

1.1e-77

82.94

Show/hide

Query:  MEAG------SFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSS
        MEAG      SF+ LL  CFFFASV SVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDC+DGTDEPGTSACARGKFYCRNMGSTPRF+FSS
Subjt:  MEAG------SFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSS

Query:  RVNDRICDCCDGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTR
        RVND ICDCCDGSDEYD N+FCPNTCVMGGN AYK++ YIST+RDV+++NRKVKEEITKEDLF +L+G +
Subjt:  RVNDRICDCCDGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTR

A0A6J1HVT0 glucosidase 2 subunit beta

1.1e-77

82.94

Show/hide

Query:  MEAG------SFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSS
        MEAG      SF+ LL  CFFFASV SVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDC+DGTDEPGTSACARGKFYCRNMGSTPRF+FSS
Subjt:  MEAG------SFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSS

Query:  RVNDRICDCCDGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTR
        RVND ICDCCDGSDEYD N+FCPNTCVMGGN AYK++ YIST+RDV+++NRKVKEEITKEDLF +L+G +
Subjt:  RVNDRICDCCDGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTR

SwissProt top hits

e value

%identity

Alignment

A2WNF5 Glucosidase 2 subunit beta

8.0e-36

49.71

Show/hide

Query:  SFISLLFICFFFASVHSVPSL--IGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDRICD
        + + LL +    ++  S P L  +G+ P DE Y+   VI+C+DGS  F  D+LNDDFCDC DGTDEPGTSAC  GKFYC+N G +P  IFSSRVND ICD
Subjt:  SFISLLFICFFFASVHSVPSL--IGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDRICD

Query:  CCDGSDEYDSNVFCPNTCVMGGNIA-----YKSNNYISTTRDVNMVNRKVKEEITKEDL-FQKLMGTRQAL
        CCDGSDEYDSNV C NTC   G  A      K   Y S     N   +K K    K++    KL G  + L
Subjt:  CCDGSDEYDSNVFCPNTCVMGGNIA-----YKSNNYISTTRDVNMVNRKVKEEITKEDL-FQKLMGTRQAL

O08795 Glucosidase 2 subunit beta

5.7e-26

55.81

Show/hide

Query:  YYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDRICDCCDGSDEYDSNVFCPNTC
        Y  S+   C DG+ +   D++NDD+CDC DG+DEPGT+AC  G F+C N G  P +I SSRVND +CDCCDG+DEY+S   C NTC
Subjt:  YYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDRICDCCDGSDEYDSNVFCPNTC

P14314 Glucosidase 2 subunit beta

5.7e-26

56.98

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Query:  YYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDRICDCCDGSDEYDSNVFCPNTC
        Y  S+   C DGS +   D++NDD+CDC DG+DEPGT+AC  G F+C N G  P +I S+RVND +CDCCDG+DEY+S V C NTC
Subjt:  YYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDRICDCCDGSDEYDSNVFCPNTC

Q5NBP9 Glucosidase 2 subunit beta

8.0e-36

49.71

Show/hide

Query:  SFISLLFICFFFASVHSVPSL--IGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDRICD
        + + LL +    ++  S P L  +G+ P DE Y+   VI+C+DGS  F  D+LNDDFCDC DGTDEPGTSAC  GKFYC+N G +P  IFSSRVND ICD
Subjt:  SFISLLFICFFFASVHSVPSL--IGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDRICD

Query:  CCDGSDEYDSNVFCPNTCVMGGNIA-----YKSNNYISTTRDVNMVNRKVKEEITKEDL-FQKLMGTRQAL
        CCDGSDEYDSNV C NTC   G  A      K   Y S     N   +K K    K++    KL G  + L
Subjt:  CCDGSDEYDSNVFCPNTCVMGGNIA-----YKSNNYISTTRDVNMVNRKVKEEITKEDL-FQKLMGTRQAL

Q9FM96 Glucosidase 2 subunit beta

3.2e-37

54.25

Show/hide

Query:  SFISLLFICFFFASVHSVPSLIGVHPLDEKYY-SSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDRICDC
        SF+ LL      +S       +G+ P DEKYY SS  IKCKDGS+ FT  +LNDDFCDC DGTDEPGTSAC  GKFYCRN G +P  +FSSRVND ICDC
Subjt:  SFISLLFICFFFASVHSVPSLIGVHPLDEKYY-SSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDRICDC

Query:  CDGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDL
        CDGSDEYD +V C NTC   G  A ++      T +  +V R+ + E  K  L
Subjt:  CDGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDL

Arabidopsis top hits

e value

%identity

Alignment

AT2G42390.1 protein kinase C substrate, heavy chain-related

1.6e-52

76.58

Show/hide

Query:  SVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDRICDCCDGSDEYDSNVFCP
        SV S   L+GVHPLDEKY+ S+VIKCKDGS+SFT DRLND+FCDC+DGTDEPGTSAC  GKFYCRN+GS+P+F++SSRVNDRICDCCDGSDEY+S++ CP
Subjt:  SVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDRICDCCDGSDEYDSNVFCP

Query:  NTCVMGGNIAY
        NTC+MGGN+ Y
Subjt:  NTCVMGGNIAY

AT5G56360.1 calmodulin-binding protein

2.3e-38

54.25

Show/hide

Query:  SFISLLFICFFFASVHSVPSLIGVHPLDEKYY-SSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDRICDC
        SF+ LL      +S       +G+ P DEKYY SS  IKCKDGS+ FT  +LNDDFCDC DGTDEPGTSAC  GKFYCRN G +P  +FSSRVND ICDC
Subjt:  SFISLLFICFFFASVHSVPSLIGVHPLDEKYY-SSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDRICDC

Query:  CDGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDL
        CDGSDEYD +V C NTC   G  A ++      T +  +V R+ + E  K  L
Subjt:  CDGSDEYDSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGAAGCGGGGAGCTTCATTTCGCTACTTTTCATCTGTTTCTTCTTCGCTTCTGTTCACTCTGTTCCTTCACTCATCGGAGTCCACCCACTCGATGAGAAGTATTATTC
CTCGGAGGTTATAAAATGCAAGGATGGGTCTAGATCTTTCACCATTGATCGTCTCAACGACGATTTCTGTGACTGCATTGATGGAACCGATGAGCCTGGTACTTCTGCAT
GTGCAAGAGGTAAATTCTATTGTAGGAATATGGGAAGTACACCACGGTTTATATTTTCTTCCCGTGTCAACGATCGTATTTGTGATTGCTGTGATGGAAGTGATGAATAT
GATAGTAATGTCTTCTGTCCAAACACGTGTGTCATGGGGGGAAATATAGCATACAAGAGCAACAATTATATTTCAACTACTCGAGATGTGAATATGGTCAACAGAAAAGT
AAAGGAGGAAATCACCAAGGAGGACTTGTTCCAGAAGCTAATGGGTACTCGCCAGGCCCTCGATGCGCGGGATAAGGATTTGCTTCTGCTACATTCACCCTACTTTGCAG
AGCCATGCCTGTCTTAA

mRNA sequence

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Protein sequence

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MEAGSFISLLFICFFFASVHSVPSLIGVHPLDEKYYSSEVIKCKDGSRSFTIDRLNDDFCDCIDGTDEPGTSACARGKFYCRNMGSTPRFIFSSRVNDRICDCCDGSDEY
DSNVFCPNTCVMGGNIAYKSNNYISTTRDVNMVNRKVKEEITKEDLFQKLMGTRQALDARDKDLLLLHSPYFAEPCLS

Spg006270 (gene) of Sponge gourd (cylindrica) v1 genome