; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006273 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006273
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold4:3924905..3930591
RNA-Seq ExpressionSpg006273
SyntenySpg006273
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH07150.1 TatD related DNase [Prunus dulcis]4.3e-0934.81Show/hide
Query:  EWVGLESLKASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSILEGI---WWASS------QGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSWGTLMLIAP
        EWV   SL  S G+ +LW+  S+ V++ + G FS   S+ I+E I   WW S       Q   +    E+   YG        Y G      G   ++  
Subjt:  EWVGLESLKASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSILEGI---WWASS------QGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSWGTLMLIAP

Query:  LWKKASDGRATKSMKQCKKVIQGCSLLDTPLVNDKFTWSNCR---VHSKIDRFLLSGS
          +K+++GR TKSM+     IQ  +L D  L+N  FTWSN R   V  ++DRFL+SGS
Subjt:  LWKKASDGRATKSMKQCKKVIQGCSLLDTPLVNDKFTWSNCR---VHSKIDRFLLSGS

CAN65484.1 hypothetical protein VITISV_029474 [Vitis vinifera]1.1e-0729.7Show/hide
Query:  EWVGLESLKASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSI--LEGIWWASSQGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSW---GTLMLIAPLWKK
        +W  L +  AS G+L++WD   +   EV+ G FS     ++   E +W ++  G  +     + K + ++        GL S  W   G   +I    +K
Subjt:  EWVGLESLKASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSI--LEGIWWASSQGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSW---GTLMLIAPLWKK

Query:  ASDGRATKSMKQCKKVIQGCSLLDTPLVNDKFTWSNCRVH---SKIDRFLLSGSLFSSFIQFFVG
            R T SMK     I  C L+D PL +  FTWSN +V+    ++DRFL S     +F Q   G
Subjt:  ASDGRATKSMKQCKKVIQGCSLLDTPLVNDKFTWSNCRVH---SKIDRFLLSGSLFSSFIQFFVG

RVW14784.1 hypothetical protein CK203_091029 [Vitis vinifera]4.7e-0830.67Show/hide
Query:  EWVGLESLKASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSI--LEGIWWASSQGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSW---GTLMLIAPLWKK
        +W  L +  AS G+L++WD   +   EV+ G FS     ++   E IW  +  G        + K + ++       VGL S  W   G   +I    +K
Subjt:  EWVGLESLKASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSI--LEGIWWASSQGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSW---GTLMLIAPLWKK

Query:  ASDGRATKSMKQCKKVIQGCSLLDTPLVNDKFTWSNCR---VHSKIDRFLLSGSLFSSFIQFF
            R T SMK     I+ C L+D+PL +  FTWSN +   V+ ++DRFL S      F++ F
Subjt:  ASDGRATKSMKQCKKVIQGCSLLDTPLVNDKFTWSNCR---VHSKIDRFLLSGSLFSSFIQFF

VVA20479.1 Hypothetical predicted protein, partial [Prunus dulcis]5.6e-0934.81Show/hide
Query:  EWVGLESLKASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSILEGI---WWASS------QGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSWGTLMLIAP
        EWV   SL  S G+ +LW+  S+ V++ + G FS   S+ I+E I   WW S       Q   +    E+   YG        Y G      G   ++  
Subjt:  EWVGLESLKASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSILEGI---WWASS------QGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSWGTLMLIAP

Query:  LWKKASDGRATKSMKQCKKVIQGCSLLDTPLVNDKFTWSNCR---VHSKIDRFLLSGS
          +K+++GR TKSM+     IQ  +L D  L+N  FTWSN R   V  ++DRFL+SGS
Subjt:  LWKKASDGRATKSMKQCKKVIQGCSLLDTPLVNDKFTWSNCR---VHSKIDRFLLSGS

XP_010647647.1 PREDICTED: uncharacterized protein LOC104878737, partial [Vitis vinifera]1.1e-0729.7Show/hide
Query:  EWVGLESLKASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSI--LEGIWWASSQGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSW---GTLMLIAPLWKK
        +W  L +  AS G+L++WD   +   EV+ G FS     ++   E +W ++  G  +     ++K + ++        GL S  W   G   +I    +K
Subjt:  EWVGLESLKASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSI--LEGIWWASSQGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSW---GTLMLIAPLWKK

Query:  ASDGRATKSMKQCKKVIQGCSLLDTPLVNDKFTWSNCRVH---SKIDRFLLSGSLFSSFIQFFVG
            R T SMK     I  C L+D PL +  FTWSN +V+    ++DRFL S     +F Q   G
Subjt:  ASDGRATKSMKQCKKVIQGCSLLDTPLVNDKFTWSNCRVH---SKIDRFLLSGSLFSSFIQFFVG

TrEMBL top hitse value%identityAlignment
A0A4Y1RS61 TatD related DNase2.1e-0934.81Show/hide
Query:  EWVGLESLKASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSILEGI---WWASS------QGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSWGTLMLIAP
        EWV   SL  S G+ +LW+  S+ V++ + G FS   S+ I+E I   WW S       Q   +    E+   YG        Y G      G   ++  
Subjt:  EWVGLESLKASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSILEGI---WWASS------QGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSWGTLMLIAP

Query:  LWKKASDGRATKSMKQCKKVIQGCSLLDTPLVNDKFTWSNCR---VHSKIDRFLLSGS
          +K+++GR TKSM+     IQ  +L D  L+N  FTWSN R   V  ++DRFL+SGS
Subjt:  LWKKASDGRATKSMKQCKKVIQGCSLLDTPLVNDKFTWSNCR---VHSKIDRFLLSGS

A0A5E4F090 Reverse transcriptase domain-containing protein (Fragment)2.7e-0934.81Show/hide
Query:  EWVGLESLKASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSILEGI---WWASS------QGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSWGTLMLIAP
        EWV   SL  S G+ +LW+  S+ V++ + G FS   S+ I+E I   WW S       Q   +    E+   YG        Y G      G   ++  
Subjt:  EWVGLESLKASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSILEGI---WWASS------QGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSWGTLMLIAP

Query:  LWKKASDGRATKSMKQCKKVIQGCSLLDTPLVNDKFTWSNCR---VHSKIDRFLLSGS
          +K+++GR TKSM+     IQ  +L D  L+N  FTWSN R   V  ++DRFL+SGS
Subjt:  LWKKASDGRATKSMKQCKKVIQGCSLLDTPLVNDKFTWSNCR---VHSKIDRFLLSGS

M5VS59 Reverse transcriptase domain-containing protein (Fragment)1.2e-0934.19Show/hide
Query:  EWVGLESLKASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSILEGI---WWASSQGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSW---GTLMLIAPLWK
        EWV   SL  S G+ +LW+  S+ V++ + G FS   S+ I+E I   WW S      + G   +++     E      G     W   G   ++    +
Subjt:  EWVGLESLKASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSILEGI---WWASSQGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSW---GTLMLIAPLWK

Query:  KASDGRATKSMKQCKKVIQGCSLLDTPLVNDKFTWSNCR---VHSKIDRFLLSGS
        K+++GR TKSM+     IQ  +L D  L+N  FTWSN R   V  ++DRFL+SGS
Subjt:  KASDGRATKSMKQCKKVIQGCSLLDTPLVNDKFTWSNCR---VHSKIDRFLLSGS

M5WPQ5 Reverse transcriptase domain-containing protein2.1e-0934.19Show/hide
Query:  EWVGLESLKASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSILEGI---WWASSQGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSW---GTLMLIAPLWK
        EWV   SL  S G+ +LW+  S+ V++ + G FS   S+ I+E I   WW S      + G   +++     E      G     W   G   ++    +
Subjt:  EWVGLESLKASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSILEGI---WWASSQGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSW---GTLMLIAPLWK

Query:  KASDGRATKSMKQCKKVIQGCSLLDTPLVNDKFTWSNCR---VHSKIDRFLLSGS
        K+++GR TKSM+     IQ  +L D  L+N  FTWSN R   V  ++DRFL+SGS
Subjt:  KASDGRATKSMKQCKKVIQGCSLLDTPLVNDKFTWSNCR---VHSKIDRFLLSGS

M5XHS0 Reverse transcriptase domain-containing protein (Fragment)1.6e-0934.19Show/hide
Query:  EWVGLESLKASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSILEGI---WWASSQGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSW---GTLMLIAPLWK
        EWV   SL  S G+ +LW+  S+ V++ + G FS   S+ I+E I   WW S      + G   +++     E      G     W   G   ++    +
Subjt:  EWVGLESLKASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSILEGI---WWASSQGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSW---GTLMLIAPLWK

Query:  KASDGRATKSMKQCKKVIQGCSLLDTPLVNDKFTWSNCR---VHSKIDRFLLSGS
        K+++GR TKSM+     IQ  +L D  L+N  FTWSN R   V  ++DRFL+SGS
Subjt:  KASDGRATKSMKQCKKVIQGCSLLDTPLVNDKFTWSNCR---VHSKIDRFLLSGS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGGCTTGAGAGTGGGGATTCTGGACCTGGAGTTCGAAGCATTGGCTTGGGTAAGGGATTGTTTGGGTACAGTCTCCAAGATGGAAAAGCCCTAAGGTTTTTGGA
GAAGAAGAAGATTGAGCTCAACAATGATCTTCTTGCAAGTCTTGAGATGATGGATCGTAAACTTCATTGGGCAACTATTAAAGAGATTATTCTAATGAAAGCAAGCATCG
GATTGGCTCTCAAACCCATCTGTTCTAATTTGGCCATGGGTATATGTCAAAATTCGAAGCAGGCACTGGATCCAATTGAGCGAGGGGGTCTTTCAGAGGAAGAGGAAATC
TTTATGGAGTCTGTCGAGGAGAAAGAGACGTCAAATTCGTTGAAAATGGTTGTCTTGCATTTGCCAAATGCATCAAATGTGGCAAGTCAGAAGGTGCAATTGAGTAGAGG
TCACATGAAGAAGGTACGATGTCCATCTAGTCAAAAGTGGTGGGCTGGAGGAAGTTATGAATCGCGAGTAACTTACGAAAAACCATCTATCAAGTCTAGAGGGCGACATT
TGGTTTCTATTTGGCTTCATAAAGCCTTGACACAAAAGTTTGAGTCTCCTAAAGGCTTGAGTTTGGGTCAACCACTAGACTCTAGAAAGTGTAAAACAATGATGGTGGTG
GTGGTGGCATGGAAGTGGACTGGGTCCAGTCATGGGCTTGGAACAAGCAAAAATTTTGGCATCAAGGAGTATGGGGATGATCCCTCGATTGTAAACTCTGAAAGGATGAC
AAACCAGTGGTTTTCGCTAGGGAGGGGATCTAGTCAGCCTTTTCAAAACAAGTTGGTTGTTGGTAACCCTACGTCTCTATCTAGTTCTTCGGCCCTTCAAGGTTTCCCTG
CAACTGGGGGTACTAATGGCAATTGGCCCGCAGCTAAGGCTTCCCTTGCTTCTATTGGAATTCATGAAATCCGAACTGAGGTGGAGTGGGTCGGCCTTGAGTCACTAAAA
GCGTCAAGAGGAGTGCTTCTTCTGTGGGATGGCAATTCGATAGGGGTTGTTGAGGTGATAAAAGGTCTGTTTTCTCCATTTCCATCTCTTTCAATATTAGAGGGAATATG
GTGGGCATCTTCACAGGGGCTTATGGTCCTCCTAGGCCTAGAGATGGAAAAGAAATATGGAATGAAATCGGAGACCTCTTTGGCCTATGTGGGCCTTGTCAGTGTCTCGT
GGGGGACTTTAATGTTAATCGCTCCCCTTTGGAAAAAGGCGTCCGACGGTAGGGCTACAAAGTCTATGAAGCAGTGTAAGAAGGTTATTCAGGGTTGTAGTTTGTTAGAC
ACCCCTTTAGTAAACGACAAGTTTACTTGGTCCAACTGTAGGGTGCATAGCAAAATAGATAGATTTCTATTATCCGGCTCCCTATTTTCTTCCTTTATCCAGTTTTTTGT
GGGGGATGGTAAGGATACATACTTTAGGGAGGACAGGTGGATGGGAGATTGTATGGCGAAGGAAGACCTTGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGGCTTGAGAGTGGGGATTCTGGACCTGGAGTTCGAAGCATTGGCTTGGGTAAGGGATTGTTTGGGTACAGTCTCCAAGATGGAAAAGCCCTAAGGTTTTTGGA
GAAGAAGAAGATTGAGCTCAACAATGATCTTCTTGCAAGTCTTGAGATGATGGATCGTAAACTTCATTGGGCAACTATTAAAGAGATTATTCTAATGAAAGCAAGCATCG
GATTGGCTCTCAAACCCATCTGTTCTAATTTGGCCATGGGTATATGTCAAAATTCGAAGCAGGCACTGGATCCAATTGAGCGAGGGGGTCTTTCAGAGGAAGAGGAAATC
TTTATGGAGTCTGTCGAGGAGAAAGAGACGTCAAATTCGTTGAAAATGGTTGTCTTGCATTTGCCAAATGCATCAAATGTGGCAAGTCAGAAGGTGCAATTGAGTAGAGG
TCACATGAAGAAGGTACGATGTCCATCTAGTCAAAAGTGGTGGGCTGGAGGAAGTTATGAATCGCGAGTAACTTACGAAAAACCATCTATCAAGTCTAGAGGGCGACATT
TGGTTTCTATTTGGCTTCATAAAGCCTTGACACAAAAGTTTGAGTCTCCTAAAGGCTTGAGTTTGGGTCAACCACTAGACTCTAGAAAGTGTAAAACAATGATGGTGGTG
GTGGTGGCATGGAAGTGGACTGGGTCCAGTCATGGGCTTGGAACAAGCAAAAATTTTGGCATCAAGGAGTATGGGGATGATCCCTCGATTGTAAACTCTGAAAGGATGAC
AAACCAGTGGTTTTCGCTAGGGAGGGGATCTAGTCAGCCTTTTCAAAACAAGTTGGTTGTTGGTAACCCTACGTCTCTATCTAGTTCTTCGGCCCTTCAAGGTTTCCCTG
CAACTGGGGGTACTAATGGCAATTGGCCCGCAGCTAAGGCTTCCCTTGCTTCTATTGGAATTCATGAAATCCGAACTGAGGTGGAGTGGGTCGGCCTTGAGTCACTAAAA
GCGTCAAGAGGAGTGCTTCTTCTGTGGGATGGCAATTCGATAGGGGTTGTTGAGGTGATAAAAGGTCTGTTTTCTCCATTTCCATCTCTTTCAATATTAGAGGGAATATG
GTGGGCATCTTCACAGGGGCTTATGGTCCTCCTAGGCCTAGAGATGGAAAAGAAATATGGAATGAAATCGGAGACCTCTTTGGCCTATGTGGGCCTTGTCAGTGTCTCGT
GGGGGACTTTAATGTTAATCGCTCCCCTTTGGAAAAAGGCGTCCGACGGTAGGGCTACAAAGTCTATGAAGCAGTGTAAGAAGGTTATTCAGGGTTGTAGTTTGTTAGAC
ACCCCTTTAGTAAACGACAAGTTTACTTGGTCCAACTGTAGGGTGCATAGCAAAATAGATAGATTTCTATTATCCGGCTCCCTATTTTCTTCCTTTATCCAGTTTTTTGT
GGGGGATGGTAAGGATACATACTTTAGGGAGGACAGGTGGATGGGAGATTGTATGGCGAAGGAAGACCTTGACTAG
Protein sequenceShow/hide protein sequence
MERLESGDSGPGVRSIGLGKGLFGYSLQDGKALRFLEKKKIELNNDLLASLEMMDRKLHWATIKEIILMKASIGLALKPICSNLAMGICQNSKQALDPIERGGLSEEEEI
FMESVEEKETSNSLKMVVLHLPNASNVASQKVQLSRGHMKKVRCPSSQKWWAGGSYESRVTYEKPSIKSRGRHLVSIWLHKALTQKFESPKGLSLGQPLDSRKCKTMMVV
VVAWKWTGSSHGLGTSKNFGIKEYGDDPSIVNSERMTNQWFSLGRGSSQPFQNKLVVGNPTSLSSSSALQGFPATGGTNGNWPAAKASLASIGIHEIRTEVEWVGLESLK
ASRGVLLLWDGNSIGVVEVIKGLFSPFPSLSILEGIWWASSQGLMVLLGLEMEKKYGMKSETSLAYVGLVSVSWGTLMLIAPLWKKASDGRATKSMKQCKKVIQGCSLLD
TPLVNDKFTWSNCRVHSKIDRFLLSGSLFSSFIQFFVGDGKDTYFREDRWMGDCMAKEDLD