; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006297 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006297
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationscaffold4:4523582..4524181
RNA-Seq ExpressionSpg006297
SyntenySpg006297
Gene Ontology termsGO:0050790 - regulation of catalytic activity (biological process)
GO:0005509 - calcium ion binding (molecular function)
GO:0030234 - enzyme regulator activity (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652452.1 hypothetical protein Csa_013816 [Cucumis sativus]1.1e-4391.35Show/hide
Query:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS
        L+ +  SNGNGSVEFDELVTAIMPDFNEEVMVNQT LLEVFRSFDRD NGYITAAELAGSMAKMGQPLTYRELTEMMKEAD DGDGVISFNEFASVMAKS
Subjt:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS

Query:  AAEF
        AA+F
Subjt:  AAEF

XP_004138337.2 probable calcium-binding protein CML15 [Cucumis sativus]1.1e-4391.35Show/hide
Query:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS
        L+ +  SNGNGSVEFDELVTAIMPDFNEEVMVNQT LLEVFRSFDRD NGYITAAELAGSMAKMGQPLTYRELTEMMKEAD DGDGVISFNEFASVMAKS
Subjt:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS

Query:  AAEF
        AA+F
Subjt:  AAEF

XP_008453344.1 PREDICTED: probable calcium-binding protein CML15 [Cucumis melo]1.1e-4391.35Show/hide
Query:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS
        L+ +  SNGNGSVEFDELVTAIMPDFNEEVMVNQT LLEVFRSFDRD NGYITAAELAGSMAKMGQPLTYRELTEMMKEAD DGDGVISFNEFASVMAKS
Subjt:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS

Query:  AAEF
        AA+F
Subjt:  AAEF

XP_022135250.1 probable calcium-binding protein CML15 [Momordica charantia]1.8e-4390.38Show/hide
Query:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS
        L+ +  +NGNGSVEFDELVTAIMPDFNEEVMVNQT LLEVFRSFDRD NGYITAAELAGSMAKMGQPLTYRELTEMMKEAD DGDGVISFNEFASVMAKS
Subjt:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS

Query:  AAEF
        A+EF
Subjt:  AAEF

XP_038880166.1 probable calcium-binding protein CML15 [Benincasa hispida]1.1e-4391.35Show/hide
Query:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS
        L+ +  SNGNGSVEFDELVTAIMPDFNEEVMVNQT LLEVFRSFDRD NGYITAAELAGSMAKMGQPLTYRELTEMMKEAD DGDGVISFNEFASVMAKS
Subjt:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS

Query:  AAEF
        AA+F
Subjt:  AAEF

TrEMBL top hitse value%identityAlignment
A0A0A0LUS7 Uncharacterized protein5.1e-4491.35Show/hide
Query:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS
        L+ +  SNGNGSVEFDELVTAIMPDFNEEVMVNQT LLEVFRSFDRD NGYITAAELAGSMAKMGQPLTYRELTEMMKEAD DGDGVISFNEFASVMAKS
Subjt:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS

Query:  AAEF
        AA+F
Subjt:  AAEF

A0A1S3BX63 probable calcium-binding protein CML155.1e-4491.35Show/hide
Query:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS
        L+ +  SNGNGSVEFDELVTAIMPDFNEEVMVNQT LLEVFRSFDRD NGYITAAELAGSMAKMGQPLTYRELTEMMKEAD DGDGVISFNEFASVMAKS
Subjt:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS

Query:  AAEF
        AA+F
Subjt:  AAEF

A0A5D3DXV7 Putative calcium-binding protein CML155.1e-4491.35Show/hide
Query:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS
        L+ +  SNGNGSVEFDELVTAIMPDFNEEVMVNQT LLEVFRSFDRD NGYITAAELAGSMAKMGQPLTYRELTEMMKEAD DGDGVISFNEFASVMAKS
Subjt:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS

Query:  AAEF
        AA+F
Subjt:  AAEF

A0A6J1C0M6 probable calcium-binding protein CML158.7e-4490.38Show/hide
Query:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS
        L+ +  +NGNGSVEFDELVTAIMPDFNEEVMVNQT LLEVFRSFDRD NGYITAAELAGSMAKMGQPLTYRELTEMMKEAD DGDGVISFNEFASVMAKS
Subjt:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS

Query:  AAEF
        A+EF
Subjt:  AAEF

A0A6J1L5D2 probable calcium-binding protein CML151.9e-4387.5Show/hide
Query:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS
        L+ +  +NGNGSVEFDELVTAI PDFNEE+MVNQTHLLEVFRSFDRD NGYITAAELAGSMAKMGQPLTYRELTEMMKEAD DGDGVISFNEFAS+MAKS
Subjt:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS

Query:  AAEF
        A++F
Subjt:  AAEF

SwissProt top hitse value%identityAlignment
Q5ZD81 Probable calcium-binding protein CML123.5e-2656.48Show/hide
Query:  LIRDFVSNGNGSVEFDELVTA----IMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASV
        LI    ++GNG+VEFDEL ++    I+      V V+Q  L E FR+FDRD NG+I+AAELA SMA+MG P+ Y ELT+MM+EAD DGDG+ISF EF ++
Subjt:  LIRDFVSNGNGSVEFDELVTA----IMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASV

Query:  MAKSAAEF
        MAKSA +F
Subjt:  MAKSAAEF

Q6L5F4 Probable calcium-binding protein CML141.4e-3064.76Show/hide
Query:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEV-MVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAK
        L+    +NGNGSVEFDEL  AI P    +  +V+Q  LLEVFR+FDRD NG+I+AAELA SMA++GQPLT+ ELT MM++AD DGDGVISF EFA+VMAK
Subjt:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEV-MVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAK

Query:  SAAEF
        SA +F
Subjt:  SAAEF

Q9FZ75 Probable calcium-binding protein CML155.8e-3771.15Show/hide
Query:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS
        L+    SNGNG VEFDELV  I+PD NEEV++N   LLE+F+SFDRD NG+I+AAELAG+MAKMGQPLTY+ELTEM+KEAD +GDGVISF EFAS+MAKS
Subjt:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS

Query:  AAEF
        A ++
Subjt:  AAEF

Q9LI84 Probable calcium-binding protein CML164.8e-3976.42Show/hide
Query:  SPLIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMA
        S L+     NGNGSVEFDELV AI+PD NEEV++NQ  L+EVFRSFDRD NG ITAAELAGSMAKMG PLTYRELTEMM EAD +GDGVISFNEF+ +MA
Subjt:  SPLIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMA

Query:  KSAAEF
        KSAA+F
Subjt:  KSAAEF

Q9M8U1 Probable calcium-binding protein CML183.2e-1952.48Show/hide
Query:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS
        LI+    N NG VEF E V  + PD   +       L  +FR FDRD NGYITAAELA SMAK+G  LT  ELT M+KEAD DGDG I F EF   +  +
Subjt:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS

Query:  A
        A
Subjt:  A

Arabidopsis top hitse value%identityAlignment
AT1G18530.1 EF hand calcium-binding protein family4.1e-3871.15Show/hide
Query:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS
        L+    SNGNG VEFDELV  I+PD NEEV++N   LLE+F+SFDRD NG+I+AAELAG+MAKMGQPLTY+ELTEM+KEAD +GDGVISF EFAS+MAKS
Subjt:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS

Query:  AAEF
        A ++
Subjt:  AAEF

AT1G32250.1 Calcium-binding EF-hand family protein2.1e-1849.49Show/hide
Query:  SNGNGSVEFDELVTAIMPDF----NEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKSA
        +  NG VEF E V  + P+            +  LL +FR FD D NG+ITAAELA SMAK+G  LT  ELT M+KEAD DGDG I+F EFA  +  +A
Subjt:  SNGNGSVEFDELVTAIMPDF----NEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKSA

AT2G41110.1 calmodulin 29.9e-1641.24Show/hide
Query:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVM
        +I +  ++GNG+++F E +  +     +    ++  L E FR FD+D NG+I+AAEL   M  +G+ LT  E+ EM+KEAD+DGDG I++ EF  VM
Subjt:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVM

AT3G03000.1 EF hand calcium-binding protein family2.3e-2052.48Show/hide
Query:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS
        LI+    N NG VEF E V  + PD   +       L  +FR FDRD NGYITAAELA SMAK+G  LT  ELT M+KEAD DGDG I F EF   +  +
Subjt:  LIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKS

Query:  A
        A
Subjt:  A

AT3G25600.1 Calcium-binding EF-hand family protein3.4e-4076.42Show/hide
Query:  SPLIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMA
        S L+     NGNGSVEFDELV AI+PD NEEV++NQ  L+EVFRSFDRD NG ITAAELAGSMAKMG PLTYRELTEMM EAD +GDGVISFNEF+ +MA
Subjt:  SPLIRDFVSNGNGSVEFDELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMA

Query:  KSAAEF
        KSAA+F
Subjt:  KSAAEF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTGCCAAACCGAACCGGTCCGGTTCGGTTCGGTTTCCAAGTTTAATTTTGACCTAACCGAACCGAACCGAAGCGGTTCGGTTCGCTGTTTTGCCCCACATATAAG
ATACGCGTTAGATCGTGGTCTTCGTCTTCGCCGCCTAGGGTTTTTCGTCTTCGTTTTCTTTGCCCGAACAGCTCGTGGTCTTCGTCTTCGCCTCCCAACCTCGTCTTCGT
CTTCGCCGCCTCAACCTCGTCTTCGTCTTCGTCGCCTCTCGTGCTTGTGGTCTTCATCTTCGCCGCTCATCCGCGACTTCGTCTCGAACGGTAATGGCTCCGTAGAGTTT
GACGAATTGGTGACCGCGATTATGCCAGATTTCAACGAGGAGGTAATGGTAAATCAGACGCATCTTCTGGAGGTTTTCCGTTCGTTCGATCGAGACGACAATGGATACAT
TACCGCGGCGGAGCTGGCTGGATCGATGGCGAAAATGGGACAGCCATTGACGTACAGAGAGCTAACGGAGATGATGAAGGAAGCCGACATGGATGGCGATGGCGTAATTA
GCTTCAATGAATTTGCATCTGTAATGGCTAAATCGGCCGCTGAATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCTGCCAAACCGAACCGGTCCGGTTCGGTTCGGTTTCCAAGTTTAATTTTGACCTAACCGAACCGAACCGAAGCGGTTCGGTTCGCTGTTTTGCCCCACATATAAG
ATACGCGTTAGATCGTGGTCTTCGTCTTCGCCGCCTAGGGTTTTTCGTCTTCGTTTTCTTTGCCCGAACAGCTCGTGGTCTTCGTCTTCGCCTCCCAACCTCGTCTTCGT
CTTCGCCGCCTCAACCTCGTCTTCGTCTTCGTCGCCTCTCGTGCTTGTGGTCTTCATCTTCGCCGCTCATCCGCGACTTCGTCTCGAACGGTAATGGCTCCGTAGAGTTT
GACGAATTGGTGACCGCGATTATGCCAGATTTCAACGAGGAGGTAATGGTAAATCAGACGCATCTTCTGGAGGTTTTCCGTTCGTTCGATCGAGACGACAATGGATACAT
TACCGCGGCGGAGCTGGCTGGATCGATGGCGAAAATGGGACAGCCATTGACGTACAGAGAGCTAACGGAGATGATGAAGGAAGCCGACATGGATGGCGATGGCGTAATTA
GCTTCAATGAATTTGCATCTGTAATGGCTAAATCGGCCGCTGAATTTTAG
Protein sequenceShow/hide protein sequence
MLCQTEPVRFGSVSKFNFDLTEPNRSGSVRCFAPHIRYALDRGLRLRRLGFFVFVFFARTARGLRLRLPTSSSSSPPQPRLRLRRLSCLWSSSSPLIRDFVSNGNGSVEF
DELVTAIMPDFNEEVMVNQTHLLEVFRSFDRDDNGYITAAELAGSMAKMGQPLTYRELTEMMKEADMDGDGVISFNEFASVMAKSAAEF