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Spg006311 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006311
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGlycine-rich protein family
Genome locationscaffold4:5814403..5814693
RNA-Seq ExpressionSpg006311
SyntenySpg006311
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016512560.1 PREDICTED: glycine-rich protein-like, partial [Nicotiana tabacum]7.2e-0651.04Show/hide
Query:  SKALAYMGLVFAIIFLVMYSEVAAARNLAKTSK-----YGGGDGSDRRNGTDDYPGCGGYYYCGGYKGGGCTYGCC--GFQGGCGRCCSYAGEPAD
        SKA  ++GL  AI FL+  SEV AA  LA+TS         G   D R+G +D  G G  YY GGYK  GC YGCC  G++ GC RCCSYAGE  D
Subjt:  SKALAYMGLVFAIIFLVMYSEVAAARNLAKTSK-----YGGGDGSDRRNGTDDYPGCGGYYYCGGYKGGGCTYGCC--GFQGGCGRCCSYAGEPAD

XP_022136254.1 glycine-rich protein 3 short isoform-like [Momordica charantia]5.5e-0641.32Show/hide
Query:  NSKALAYMGLVFAIIFLVMYSEVAAARNL-------------AKTSKY--------GGGDGSDRRNGTDDYPGCGGYYYCGGYKGGG-------CTYGCC
        NSKA   +GL+FA++  V+ S    AR+L             AK   Y        GG D    R G   YPG GG +Y GGY G G       C +GCC
Subjt:  NSKALAYMGLVFAIIFLVMYSEVAAARNL-------------AKTSKY--------GGGDGSDRRNGTDDYPGCGGYYYCGGYKGGG-------CTYGCC

Query:  GFQGGCGRCCSYAGEPADSKP
        G+ G CGRCCSYAGE  D +P
Subjt:  GFQGGCGRCCSYAGEPADSKP

XP_022930692.1 glycine-rich protein DC7.1-like [Cucurbita moschata]2.1e-0548.42Show/hide
Query:  MSSN-SKALAYMGLVFAIIFLVMYSEVAAARNLAKTSKYGGGDGSDRRNGTDDYPGCGGYY-YCGGY-KGGGCTYGCCGFQGG--CGRCCSYAGE
        MSSN  KA A++GLV  +I + + SEV AAR+L +T    GG+GS   +G DD PGCG Y   C G+   GGC +GCCG + G  C +CCS   E
Subjt:  MSSN-SKALAYMGLVFAIIFLVMYSEVAAARNLAKTSKYGGGDGSDRRNGTDDYPGCGGYY-YCGGY-KGGGCTYGCCGFQGG--CGRCCSYAGE

XP_022989540.1 glycine-rich protein DC7.1-like [Cucurbita maxima]2.1e-0547.37Show/hide
Query:  MSSN-SKALAYMGLVFAIIFLVMYSEVAAARNLAKTSKYGGGDGSDRRNGTDDYPGCGGYY-YCGGY-KGGGCTYGCCGFQGG--CGRCCSYAGE
        MSSN  KA A++GLV  ++ + + SEV AAR+L +T KY  GD     +G DD PGCG Y+  C G+   GGC +GCCG + G  C +CCS   E
Subjt:  MSSN-SKALAYMGLVFAIIFLVMYSEVAAARNLAKTSKYGGGDGSDRRNGTDDYPGCGGYY-YCGGY-KGGGCTYGCCGFQGG--CGRCCSYAGE

XP_028764680.1 glycine-rich protein 3 short isoform-like [Prosopis alba]7.2e-0639.34Show/hide
Query:  FAIIFLVMYSEVAAARNL---------AKTSKYGGGDGSDRRNGTDDYPGCGGYY-----------------------------YCGGYKGGGCTYGCCG
        FA+  L++ SEV AAR+L         AKT K+G  D  D + G   YPG GGYY                             Y GGY+GG C YGCCG
Subjt:  FAIIFLVMYSEVAAARNL---------AKTSKYGGGDGSDRRNGTDDYPGCGGYY-----------------------------YCGGYKGGGCTYGCCG

Query:  --FQGGCGRCCSYAGEPADSKP
          ++G C RCC YAGE  D++P
Subjt:  --FQGGCGRCCSYAGEPADSKP

TrEMBL top hitse value%identityAlignment
A0A0A0K6K9 Uncharacterized protein4.1e-0742.57Show/hide
Query:  SNSKALAYM-GLVFAIIFLVMYSEVAAARNLAKTSKYGGGDGSDRRNGTDDYPGCGGYYYCGGY----KGGGCTYGCCGF--QGGCGRCCSYAGEPADSK
        SNSK   ++  LVF+I+ +++ S   AAR+L           SD R  + D PGCG YY CGGY     G GC++GCCGF   G C +CC+YA E  +  
Subjt:  SNSKALAYM-GLVFAIIFLVMYSEVAAARNLAKTSKYGGGDGSDRRNGTDDYPGCGGYYYCGGY----KGGGCTYGCCGF--QGGCGRCCSYAGEPADSK

Query:  P
        P
Subjt:  P

A0A1S4DAE5 glycine-rich protein-like5.0e-0552.75Show/hide
Query:  SKALAYMGLVFAIIFLVMYSEVAAARNLAKTSKYGGGDGSDRRNGTDDYPGCGGYYYCGGYKGGGCTYGCC--GFQGGCGRCCSYAGEPAD
        SKA  ++GL  AI FL+  SEV AA  LA+TSK       D  NG     G  G YY GGYK  GC YGCC  G++ GC RCCSYAGE  D
Subjt:  SKALAYMGLVFAIIFLVMYSEVAAARNLAKTSKYGGGDGSDRRNGTDDYPGCGGYYYCGGYKGGGCTYGCC--GFQGGCGRCCSYAGEPAD

A0A5D3BTN8 Uncharacterized protein8.6e-0539.6Show/hide
Query:  SNSKALAYM-GLVFAIIFLVMYSEVAAARNLAKTSKYGGGDGSDRRNGTDDYPGCGGYYYCGGY----KGGGCTYGCCGFQ--GGCGRCCSYAGEPADSK
        SNS+   ++  LVF+II +++ S   A R+L            D    + D PGCG Y  CGGY     G GC++GCCGF   G C +CC+YA E  + K
Subjt:  SNSKALAYM-GLVFAIIFLVMYSEVAAARNLAKTSKYGGGDGSDRRNGTDDYPGCGGYYYCGGY----KGGGCTYGCCGFQ--GGCGRCCSYAGEPADSK

Query:  P
        P
Subjt:  P

A0A6J1C3T3 glycine-rich protein 3 short isoform-like2.7e-0641.32Show/hide
Query:  NSKALAYMGLVFAIIFLVMYSEVAAARNL-------------AKTSKY--------GGGDGSDRRNGTDDYPGCGGYYYCGGYKGGG-------CTYGCC
        NSKA   +GL+FA++  V+ S    AR+L             AK   Y        GG D    R G   YPG GG +Y GGY G G       C +GCC
Subjt:  NSKALAYMGLVFAIIFLVMYSEVAAARNL-------------AKTSKY--------GGGDGSDRRNGTDDYPGCGGYYYCGGYKGGG-------CTYGCC

Query:  GFQGGCGRCCSYAGEPADSKP
        G+ G CGRCCSYAGE  D +P
Subjt:  GFQGGCGRCCSYAGEPADSKP

Q9LWA1 Cell wall protein8.6e-0546.94Show/hide
Query:  SKALAYMGLVFAIIFLVMYSEVAAARNLAKTSKYGGGDGSD--RRNGTDDYPGCG--GYY---YCGGYKGGGCTYGCC--GFQGGCGRCCSYAGEPAD
        SKA  ++GL  AI FL+ +  VAA   LA+TS     D  +    +G   Y G G  GYY   + GGYK  GC YGCC  G+  GC RCCSYAGE  D
Subjt:  SKALAYMGLVFAIIFLVMYSEVAAARNLAKTSKYGGGDGSD--RRNGTDDYPGCG--GYY---YCGGYKGGGCTYGCC--GFQGGCGRCCSYAGEPAD

SwissProt top hitse value%identityAlignment
P23137 Glycine-rich protein1.3e-0548.04Show/hide
Query:  SKALAYMGLVFAIIFLVMYSEVAAARNLAKTS---KYGGGDG--SDRRNGTDDYPGCGGYY------YCGGYKGGGCTYGCC--GFQGGCGRCCSYAGEP
        SKA  ++GL  A  FL+  SEV A   LA+TS   K  G +G   D R G +D  G  GYY        GGYK  GC YGCC  G+  GC RCCSYAGE 
Subjt:  SKALAYMGLVFAIIFLVMYSEVAAARNLAKTS---KYGGGDG--SDRRNGTDDYPGCGGYY------YCGGYKGGGCTYGCC--GFQGGCGRCCSYAGEP

Query:  AD
         D
Subjt:  AD

Q9ZSJ6 Glycine-rich protein 3 short isoform1.4e-0440Show/hide
Query:  SKALAYMGLVFAIIFLVMYSEVAAA-------RNLAKTSKYGGG---DGSDRRNGTDDYPGCGGYYYCGG---YKGGG---------CTYGCCGFQG--G
        SK L  +GL FA +F+V  SE+AAA           K  ++GGG   +G  R  G   + G GG  Y GG   Y+GGG         C +GCC ++G  G
Subjt:  SKALAYMGLVFAIIFLVMYSEVAAA-------RNLAKTSKYGGG---DGSDRRNGTDDYPGCGGYYYCGG---YKGGG---------CTYGCCGFQG--G

Query:  CGRCCSYAGEPADSK
        C RCCSYAGE   ++
Subjt:  CGRCCSYAGEPADSK

Arabidopsis top hitse value%identityAlignment
AT2G05380.2 glycine-rich protein 3 short isoform6.9e-0743.27Show/hide
Query:  SKALAYMGLVFAIIFLVMYSEVAAA-------RNLAKTSKYGGGDGSDRRNGTDDYPGCGGYYYCGGYKGGG----CTYGCCGFQG--GCGRCCSYAGEP
        SK L  +GL FA +F+V  SE+AAA           K  ++GGG G    NG   Y G GG Y  GG + GG    C +GCC ++G  GC RCCSYAGE 
Subjt:  SKALAYMGLVFAIIFLVMYSEVAAA-------RNLAKTSKYGGGDGSDRRNGTDDYPGCGGYYYCGGYKGGG----CTYGCCGFQG--GCGRCCSYAGEP

Query:  ADSK
          ++
Subjt:  ADSK

AT2G05520.3 glycine-rich protein 36.9e-0739.2Show/hide
Query:  SKALAYMGLVFAIIFLVMYSEVAAA---------RNLAKTSKYGGGD-GSDRRNGTDDYPGCGGYYYCGG---------YKGGG------------CTYG
        SKAL  +GL FA++ +V  SEVAAA         +   K  + G GD G +  NG  +Y G GG Y  GG         Y+GGG            C +G
Subjt:  SKALAYMGLVFAIIFLVMYSEVAAA---------RNLAKTSKYGGGD-GSDRRNGTDDYPGCGGYYYCGG---------YKGGG------------CTYG

Query:  CCGFQG--GCGRCCSYAGEPADSKP
        CC ++G  GC RCCSYAGE   ++P
Subjt:  CCGFQG--GCGRCCSYAGEPADSKP

AT2G05520.5 glycine-rich protein 31.8e-0742.34Show/hide
Query:  SKALAYMGLVFAIIFLVMYSEVAAA---------RNLAKTSKYGGGD-GSDRRNGTDDYPGCGGYYYCGGYKGGG-------CTYGCCGFQG--GCGRCC
        SKAL  +GL FA++ +V  SEVAAA         +   K  + G GD G +  NG   Y G GG Y  GG + GG       C +GCC ++G  GC RCC
Subjt:  SKALAYMGLVFAIIFLVMYSEVAAA---------RNLAKTSKYGGGD-GSDRRNGTDDYPGCGGYYYCGGYKGGG-------CTYGCCGFQG--GCGRCC

Query:  SYAGEPADSKP
        SYAGE   ++P
Subjt:  SYAGEPADSKP

AT2G05520.6 glycine-rich protein 33.1e-0740.17Show/hide
Query:  SKALAYMGLVFAIIFLVMYSEVAAA---------RNLAKTSKYGGGDGSDRRNGTDDYPGCGGYYYCGG--YKGGG------------CTYGCCGFQG--
        SKAL  +GL FA++ +V  SEVAAA         +   K  + G GD     N    Y G GG Y  GG  Y+GGG            C +GCC ++G  
Subjt:  SKALAYMGLVFAIIFLVMYSEVAAA---------RNLAKTSKYGGGDGSDRRNGTDDYPGCGGYYYCGG--YKGGG------------CTYGCCGFQG--

Query:  GCGRCCSYAGEPADSKP
        GC RCCSYAGE   ++P
Subjt:  GCGRCCSYAGEPADSKP

AT2G05530.1 Glycine-rich protein family1.4e-0742.61Show/hide
Query:  SKALAYMGLVFAIIFLVMYSEVAAARNLAKT--------SKYGGGDGSD-RRNGTDDYPG-----CGGYYYCGGYKGGG-------CTYGCCGFQG--GC
        SKAL   GL FA++ +V  +EVAAA    K+         +Y GG G +   NG   Y G      GGY   GGY GGG       C YGCC ++G  GC
Subjt:  SKALAYMGLVFAIIFLVMYSEVAAARNLAKT--------SKYGGGDGSD-RRNGTDDYPG-----CGGYYYCGGYKGGG-------CTYGCCGFQG--GC

Query:  GRCCSYAGEPADSKP
         RCCSYAGE   ++P
Subjt:  GRCCSYAGEPADSKP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCAACTCCAAAGCTTTGGCTTATATGGGTCTTGTCTTTGCCATTATTTTCCTTGTCATGTACTCAGAGGTGGCCGCCGCAAGGAACCTCGCAAAGACTTCCAA
ATACGGCGGTGGCGACGGCAGCGACCGCCGCAACGGCACCGATGACTACCCTGGCTGCGGCGGCTACTATTACTGTGGTGGATATAAGGGAGGTGGCTGCACTTACGGTT
GCTGTGGTTTTCAAGGTGGGTGCGGTCGGTGCTGCAGCTACGCTGGTGAACCTGCTGATTCGAAACCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTTCCAACTCCAAAGCTTTGGCTTATATGGGTCTTGTCTTTGCCATTATTTTCCTTGTCATGTACTCAGAGGTGGCCGCCGCAAGGAACCTCGCAAAGACTTCCAA
ATACGGCGGTGGCGACGGCAGCGACCGCCGCAACGGCACCGATGACTACCCTGGCTGCGGCGGCTACTATTACTGTGGTGGATATAAGGGAGGTGGCTGCACTTACGGTT
GCTGTGGTTTTCAAGGTGGGTGCGGTCGGTGCTGCAGCTACGCTGGTGAACCTGCTGATTCGAAACCTTAG
Protein sequenceShow/hide protein sequence
MSSNSKALAYMGLVFAIIFLVMYSEVAAARNLAKTSKYGGGDGSDRRNGTDDYPGCGGYYYCGGYKGGGCTYGCCGFQGGCGRCCSYAGEPADSKP