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Spg006326 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006326
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationscaffold4:3776552..3776965
RNA-Seq ExpressionSpg006326
SyntenySpg006326
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004144527.1 uncharacterized protein LOC101208564 [Cucumis sativus]7.5e-5783.94Show/hide
Query:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        MSVE+L+SATI++FVEDEEAFS  +RERFSHLD+DRDGVL YGEMLKELQSLRV ETHFGID KPD +ELSSVYGSLFLQFDRDCNGKVDLGEFM ETKK
Subjt:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGFLPVQMLLEENSFLKKAVERKAMKIVA
        MMLAMANGIG  PVQMLLEENSFLKKAV+R++ K+ A
Subjt:  MMLAMANGIGFLPVQMLLEENSFLKKAVERKAMKIVA

XP_008455503.1 PREDICTED: uncharacterized protein LOC103495655 [Cucumis melo]2.3e-5886.13Show/hide
Query:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        MSVE+LDSATI++FVEDEEAFS  +RERFSHLDMDRDGVL YGEMLKELQSLRVFETHFGID KPD +ELSSVY SLFLQFDRDCNGKVDLGEFMAETKK
Subjt:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGFLPVQMLLEENSFLKKAVERKAMKIVA
        MMLAMANGIG  PVQMLLEENSFLKKAV+R++ K+ A
Subjt:  MMLAMANGIGFLPVQMLLEENSFLKKAVERKAMKIVA

XP_022136066.1 uncharacterized protein LOC111007849 [Momordica charantia]5.7e-5783.21Show/hide
Query:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        MSVELLD ATI+ FVEDEE F  TV+ERFSHLD DRDGVLSYGEML+ELQSLRV ETHFGIDVKPD DE+S+VYGSLFL FDRDCNGKVDLGEFMAETKK
Subjt:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGFLPVQMLLEENSFLKKAVERKAMKIVA
        MMLAMANGIG LP+QM+LEEN FLKKAVER+  K+ A
Subjt:  MMLAMANGIGFLPVQMLLEENSFLKKAVERKAMKIVA

XP_022930660.1 uncharacterized protein LOC111437061 [Cucurbita moschata]6.3e-5682.48Show/hide
Query:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        MSVE+LDSATI++FVED+E F   VRERFSHLD+D DGVLSY EML+ELQSLRVFETHFGIDVKPD DELSSVYGSLFLQFDRDC+GKVD+GEFM ETKK
Subjt:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGFLPVQMLLEENSFLKKAVERKAMKIVA
        MM+AMANGIGF PVQM+LEENSFLKKAVER++ K+ A
Subjt:  MMLAMANGIGFLPVQMLLEENSFLKKAVERKAMKIVA

XP_038888629.1 uncharacterized protein LOC120078427 [Benincasa hispida]4.7e-5986.13Show/hide
Query:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        MSVE+LDSATI++FVEDEEAFS ++RERFSHLD+DRDGVL YGEMLKELQSLRV ETHFGID KPD DELSSVYGSLF QFDRDCNGKVDLGEFMAETKK
Subjt:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGFLPVQMLLEENSFLKKAVERKAMKIVA
        MMLAMANGIGF PVQMLLEENSFLKKAV+R++ K+ A
Subjt:  MMLAMANGIGFLPVQMLLEENSFLKKAVERKAMKIVA

TrEMBL top hitse value%identityAlignment
A0A0A0K1Y0 Calcium ion binding protein3.6e-5783.94Show/hide
Query:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        MSVE+L+SATI++FVEDEEAFS  +RERFSHLD+DRDGVL YGEMLKELQSLRV ETHFGID KPD +ELSSVYGSLFLQFDRDCNGKVDLGEFM ETKK
Subjt:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGFLPVQMLLEENSFLKKAVERKAMKIVA
        MMLAMANGIG  PVQMLLEENSFLKKAV+R++ K+ A
Subjt:  MMLAMANGIGFLPVQMLLEENSFLKKAVERKAMKIVA

A0A1S3C1T0 uncharacterized protein LOC1034956551.1e-5886.13Show/hide
Query:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        MSVE+LDSATI++FVEDEEAFS  +RERFSHLDMDRDGVL YGEMLKELQSLRVFETHFGID KPD +ELSSVY SLFLQFDRDCNGKVDLGEFMAETKK
Subjt:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGFLPVQMLLEENSFLKKAVERKAMKIVA
        MMLAMANGIG  PVQMLLEENSFLKKAV+R++ K+ A
Subjt:  MMLAMANGIGFLPVQMLLEENSFLKKAVERKAMKIVA

A0A5D3DDG8 Calcium-binding EF-hand family protein1.1e-5886.13Show/hide
Query:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        MSVE+LDSATI++FVEDEEAFS  +RERFSHLDMDRDGVL YGEMLKELQSLRVFETHFGID KPD +ELSSVY SLFLQFDRDCNGKVDLGEFMAETKK
Subjt:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGFLPVQMLLEENSFLKKAVERKAMKIVA
        MMLAMANGIG  PVQMLLEENSFLKKAV+R++ K+ A
Subjt:  MMLAMANGIGFLPVQMLLEENSFLKKAVERKAMKIVA

A0A6J1C2G7 uncharacterized protein LOC1110078492.8e-5783.21Show/hide
Query:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        MSVELLD ATI+ FVEDEE F  TV+ERFSHLD DRDGVLSYGEML+ELQSLRV ETHFGIDVKPD DE+S+VYGSLFL FDRDCNGKVDLGEFMAETKK
Subjt:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGFLPVQMLLEENSFLKKAVERKAMKIVA
        MMLAMANGIG LP+QM+LEEN FLKKAVER+  K+ A
Subjt:  MMLAMANGIGFLPVQMLLEENSFLKKAVERKAMKIVA

A0A6J1EXF9 uncharacterized protein LOC1114370613.1e-5682.48Show/hide
Query:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        MSVE+LDSATI++FVED+E F   VRERFSHLD+D DGVLSY EML+ELQSLRVFETHFGIDVKPD DELSSVYGSLFLQFDRDC+GKVD+GEFM ETKK
Subjt:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGFLPVQMLLEENSFLKKAVERKAMKIVA
        MM+AMANGIGF PVQM+LEENSFLKKAVER++ K+ A
Subjt:  MMLAMANGIGFLPVQMLLEENSFLKKAVERKAMKIVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein1.2e-0931.45Show/hide
Query:  LLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKKMMLA
        ++ S T++ F+ D ++F +   + F  LD+D++G+LS  E+ + L ++   E+    +V P  DE  +VY ++F +F  D   K +  + +AE   ++ A
Subjt:  LLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKKMMLA

Query:  MANGIGFLPVQMLLEENSFLKKAV
        MA GIG  PV M++  +  + KAV
Subjt:  MANGIGFLPVQMLLEENSFLKKAV

AT2G44310.1 Calcium-binding EF-hand family protein2.3e-3248.18Show/hide
Query:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK
        M V L+D +T+  FV+DEE F  +V ERF+ LD+++DGVLS  E+ K  +S+R+ E+HFG+DV   QDEL+++Y S+F +FD D +G VDL EF +E KK
Subjt:  MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKK

Query:  MMLAMANGIGFLPVQMLL--EENSFLKKAVERKAMKI
        ++LA+A+G+G  P+ M+L  ++++FLKKA + +A K+
Subjt:  MMLAMANGIGFLPVQMLL--EENSFLKKAVERKAMKI

AT4G38810.2 Calcium-binding EF-hand family protein4.4e-0725Show/hide
Query:  ELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKKMML
        ++LD + I++ VE+E+ F   V ++F  LD D DG LS  E+   +  +       G+  +    +   +Y  +  +F      KV   EF      ++L
Subjt:  ELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKKMML

Query:  AMANGIGFLPVQMLLEENSFLKKAVERKAMKI
         MA G+   P+ +L  +   L + V     +I
Subjt:  AMANGIGFLPVQMLLEENSFLKKAVERKAMKI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCGTAGAACTTTTGGACAGCGCCACAATTCTCGACTTTGTGGAAGACGAAGAAGCCTTCAGCACGACAGTCAGAGAGCGATTCAGTCACCTCGACATGGACAGAGA
TGGCGTTCTTTCGTATGGTGAGATGTTGAAGGAGTTGCAGAGCCTTAGAGTGTTCGAGACCCATTTTGGAATCGACGTGAAACCCGACCAGGATGAGCTTTCTTCTGTCT
ATGGCTCGTTGTTTCTGCAGTTTGATCGAGATTGCAATGGGAAAGTTGATTTGGGTGAGTTCATGGCGGAAACTAAGAAGATGATGCTTGCAATGGCGAACGGAATCGGG
TTCTTGCCGGTTCAGATGCTGCTGGAAGAAAACAGCTTCTTGAAGAAAGCTGTAGAGAGAAAAGCCATGAAAATAGTTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCGTAGAACTTTTGGACAGCGCCACAATTCTCGACTTTGTGGAAGACGAAGAAGCCTTCAGCACGACAGTCAGAGAGCGATTCAGTCACCTCGACATGGACAGAGA
TGGCGTTCTTTCGTATGGTGAGATGTTGAAGGAGTTGCAGAGCCTTAGAGTGTTCGAGACCCATTTTGGAATCGACGTGAAACCCGACCAGGATGAGCTTTCTTCTGTCT
ATGGCTCGTTGTTTCTGCAGTTTGATCGAGATTGCAATGGGAAAGTTGATTTGGGTGAGTTCATGGCGGAAACTAAGAAGATGATGCTTGCAATGGCGAACGGAATCGGG
TTCTTGCCGGTTCAGATGCTGCTGGAAGAAAACAGCTTCTTGAAGAAAGCTGTAGAGAGAAAAGCCATGAAAATAGTTGCTTGA
Protein sequenceShow/hide protein sequence
MSVELLDSATILDFVEDEEAFSTTVRERFSHLDMDRDGVLSYGEMLKELQSLRVFETHFGIDVKPDQDELSSVYGSLFLQFDRDCNGKVDLGEFMAETKKMMLAMANGIG
FLPVQMLLEENSFLKKAVERKAMKIVA