; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006330 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006330
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionExopolygalacturonase-like
Genome locationscaffold4:5672169..5679459
RNA-Seq ExpressionSpg006330
SyntenySpg006330
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059116.1 exopolygalacturonase-like [Cucumis melo var. makuwa]1.2e-8052.52Show/hide
Query:  VVFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFAWK----------------
        V+F LRKYG +VSGADVT+       DACA +RPS VVIPKG FKV EG+FKGPCKSPIE+R+RGTLQAP HPHGDSWITFA+                 
Subjt:  VVFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFAWK----------------

Query:  ---QTNQSHQR-----------------------------------------------------------------------------------------
           + N  H+R                                                                                         
Subjt:  ---QTNQSHQR-----------------------------------------------------------------------------------------

Query:  --------DMPGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKIS
                  PGH ISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTW ASP  GIATNMHF DI MVNVSNPILIDQEYC WNQCNRKIPSKIKI+
Subjt:  --------DMPGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKIS

Query:  KVSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISL
        KVSFKNI+GSSATPVA+KLICSS++PC+EVKVANI L
Subjt:  KVSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISL

XP_008455553.1 PREDICTED: exopolygalacturonase-like [Cucumis melo]3.5e-8051.93Show/hide
Query:  VVFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFAWK----------------
        V+F LRKYG +VSGADVT+       DACA +RPS VVIPKG FKV EG+FKGPCKSP+E+R+RGTLQAP HPHGDSWITFA+                 
Subjt:  VVFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFAWK----------------

Query:  ---QTNQSHQRDM---------------------------------------------------------------------------------------
           + N  H+                                                                                          
Subjt:  ---QTNQSHQRDM---------------------------------------------------------------------------------------

Query:  ----------PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKIS
                  PGH ISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTW ASP  GIATNMHF DI MVNVSNPILIDQEYC WNQCNRKIPSKIKI+
Subjt:  ----------PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKIS

Query:  KVSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISL
        KVSFKNI+GSSATPVA+KLICSS++PC+EVKVANI L
Subjt:  KVSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISL

XP_031741749.1 exopolygalacturonase-like [Cucumis sativus]3.5e-8052.52Show/hide
Query:  VVFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFAWK----------------
        V+FPL KYG +VSGADVT+       DACA V PS VVIPKGIFKV EGKFKGPCKSPIEIR+RGTLQAP HP+GDSWITFA+                 
Subjt:  VVFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFAWK----------------

Query:  ---QTNQSHQR------------DM---------------------------------------------------------------------------
           + N  H+R            D                                                                            
Subjt:  ---QTNQSHQR------------DM---------------------------------------------------------------------------

Query:  ----------PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKIS
                  PGH ISIGSLGKYTNEEPVEGVIVKNCTI+NTTNGVRIKTW  SP  GIATNMHFSDI MVNVSNPILIDQEYC WNQCNR+IPS IKI+
Subjt:  ----------PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKIS

Query:  KVSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISL
        KVSF+NI+GSSATPVA+KLICSS++PCDEVKVANI L
Subjt:  KVSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISL

XP_031742281.1 exopolygalacturonase-like [Cucumis sativus]9.2e-8153.12Show/hide
Query:  VVFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFAWK----------------
        V+FPLRKYG +VSGADVT+       DACA VRPS VVIPKGIFKV EG+FKGPCKSPIEIR+RGTLQAP HPHGDSWITFA+                 
Subjt:  VVFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFAWK----------------

Query:  ---QTNQSHQR------------DM---------------------------------------------------------------------------
           + N  H+R            D                                                                            
Subjt:  ---QTNQSHQR------------DM---------------------------------------------------------------------------

Query:  ----------PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKIS
                  PGH ISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTW ASP  GIAT+MHFSDI MVNVSNPILIDQEYC WNQCNR+IPS IKI+
Subjt:  ----------PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKIS

Query:  KVSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISL
         VSFKNI+GSSATPVA+KLICSS+ PC+EVKVANI L
Subjt:  KVSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISL

XP_038887188.1 exopolygalacturonase-like [Benincasa hispida]1.6e-8052.23Show/hide
Query:  VVFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFAW-----------------
        V+FPLRKYG +V G DVT+       DACA VRP  VVIPKGIFKVSE KFKGPCKSPIEIRLRG+LQAP HP+GDSWITFA+                 
Subjt:  VVFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFAW-----------------

Query:  ---------------------------------------------------------------------------------------------------K
                                                                                                           K
Subjt:  ---------------------------------------------------------------------------------------------------K

Query:  QTNQSHQRDMPGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKIS
        +   ++    PGH ISIGSLGKYTNEEPVEGVI+KNCTIMNTTNGVRIKTW ASP +G ATNMHFSDIIMVNVSNPILIDQEYC WNQCNRKIPSKIKIS
Subjt:  QTNQSHQRDMPGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKIS

Query:  KVSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISL
        KVSFKNI+GSSATP+A+KLICS  +PCDEVKVANI L
Subjt:  KVSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISL

TrEMBL top hitse value%identityAlignment
A0A0A0K3B7 Uncharacterized protein2.3e-7751.19Show/hide
Query:  VFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFAWK-----------------
        +F LRKYG +VSGADVT+       DACA  RPS VVIPKG FKV EG+FKGPCKSPIE R+ GTLQAP HPHGDSWITFA+                  
Subjt:  VFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFAWK-----------------

Query:  --QTNQSHQR------------DM----------------------------------------------------------------------------
          + N  H+R            D                                                                             
Subjt:  --QTNQSHQR------------DM----------------------------------------------------------------------------

Query:  ---------PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISK
                 PGH ISIGSLGKY NEEPVEGVIV NCTI+NTTNGVRIKTW ASP  GIATNMHFSDI MVNVSNPILIDQEYC WNQCNR+IPS IKI+K
Subjt:  ---------PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISK

Query:  VSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISL
        VSFKNI+GSSATPVA+KLICSS++PC+EVKVANI L
Subjt:  VSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISL

A0A1S3C2F4 exopolygalacturonase-like1.7e-8051.93Show/hide
Query:  VVFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFAWK----------------
        V+F LRKYG +VSGADVT+       DACA +RPS VVIPKG FKV EG+FKGPCKSP+E+R+RGTLQAP HPHGDSWITFA+                 
Subjt:  VVFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFAWK----------------

Query:  ---QTNQSHQRDM---------------------------------------------------------------------------------------
           + N  H+                                                                                          
Subjt:  ---QTNQSHQRDM---------------------------------------------------------------------------------------

Query:  ----------PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKIS
                  PGH ISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTW ASP  GIATNMHF DI MVNVSNPILIDQEYC WNQCNRKIPSKIKI+
Subjt:  ----------PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKIS

Query:  KVSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISL
        KVSFKNI+GSSATPVA+KLICSS++PC+EVKVANI L
Subjt:  KVSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISL

A0A5A7UY44 Exopolygalacturonase-like5.8e-8152.52Show/hide
Query:  VVFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFAWK----------------
        V+F LRKYG +VSGADVT+       DACA +RPS VVIPKG FKV EG+FKGPCKSPIE+R+RGTLQAP HPHGDSWITFA+                 
Subjt:  VVFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFAWK----------------

Query:  ---QTNQSHQR-----------------------------------------------------------------------------------------
           + N  H+R                                                                                         
Subjt:  ---QTNQSHQR-----------------------------------------------------------------------------------------

Query:  --------DMPGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKIS
                  PGH ISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTW ASP  GIATNMHF DI MVNVSNPILIDQEYC WNQCNRKIPSKIKI+
Subjt:  --------DMPGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKIS

Query:  KVSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISL
        KVSFKNI+GSSATPVA+KLICSS++PC+EVKVANI L
Subjt:  KVSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISL

A0A5D3DD75 Exopolygalacturonase-like1.7e-8051.93Show/hide
Query:  VVFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFAWK----------------
        V+F LRKYG +VSGADVT+       DACA +RPS VVIPKG FKV EG+FKGPCKSP+E+R+RGTLQAP HPHGDSWITFA+                 
Subjt:  VVFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFAWK----------------

Query:  ---QTNQSHQRDM---------------------------------------------------------------------------------------
           + N  H+                                                                                          
Subjt:  ---QTNQSHQRDM---------------------------------------------------------------------------------------

Query:  ----------PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKIS
                  PGH ISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTW ASP  GIATNMHF DI MVNVSNPILIDQEYC WNQCNRKIPSKIKI+
Subjt:  ----------PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKIS

Query:  KVSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISL
        KVSFKNI+GSSATPVA+KLICSS++PC+EVKVANI L
Subjt:  KVSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISL

A0A6J1C2C8 exopolygalacturonase-like1.6e-7550.59Show/hide
Query:  VVFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFA------------------
        VV+ LRKYG +VSGADV+Q       DACA VRPS VVIP+GIFKVS+G F+GPCKS IE RLRGTLQAPTHP G+SWITFA                  
Subjt:  VVFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFA------------------

Query:  --WKQ---------------------TNQSHQRDM-----------------------------------------------------------------
          W++                     TN + +R                                                                   
Subjt:  --WKQ---------------------TNQSHQRDM-----------------------------------------------------------------

Query:  ----------PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKIS
                  PGH ISIGSLG+YT EEPV+GVIVKNCTIMNTTNGVRIKTW AS  TG ATNMHF DIIMVNVS+PILIDQEYC WNQCNR+IPSKIKIS
Subjt:  ----------PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKIS

Query:  KVSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISLT
        KV+FKNI+GSSATPVA+KLICSS +PCDEVK+ +I LT
Subjt:  KVSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISLT

SwissProt top hitse value%identityAlignment
P24548 Exopolygalacturonase (Fragment)6.9e-3934.28Show/hide
Query:  QDACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHP---HGDSWITF--------------------AWKQTNQSHQ-----------
        ++ACA   PS +++PKG F V     +GPCKS I ++L+GTL+AP  P    G  WI                      AW Q N  H+           
Subjt:  QDACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHP---HGDSWITF--------------------AWKQTNQSHQ-----------

Query:  -----------RDM----------------------------------------------------------------------------PGHDISIGSL
                   RD+                                                                            PGH IS+GSL
Subjt:  -----------RDM----------------------------------------------------------------------------PGHDISIGSL

Query:  GKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISKVSFKNIKGSSATPVAIKLI
        G+Y NEE V G+ VKNCTI  + NGVRIKTW  S   G A+ MHF DI M +V  PILIDQ YC +NQC  ++PS +K+SK+SFKNIKG+S T  A+KL+
Subjt:  GKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISKVSFKNIKGSSATPVAIKLI

Query:  CSSDIPCDEVKVANISLT
        CS   PC+ V++A+I LT
Subjt:  CSSDIPCDEVKVANISLT

Q05967 Polygalacturonase1.6e-4032.64Show/hide
Query:  VFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHG---DSWITF-----------------
        VF + KYG   S AD+++       +AC    PS +VIPKG F +++ K +GPCKSP+E++++ TL+AP+ P       W+T                  
Subjt:  VFPLRKYGVLVSGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHG---DSWITF-----------------

Query:  ---AW--KQTNQSHQ---------------RDM-------------------------------------------------------------------
           AW  KQ+ + ++               +D+                                                                   
Subjt:  ---AW--KQTNQSHQ---------------RDM-------------------------------------------------------------------

Query:  ---------PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISK
                 PGH IS+GSLG   +E+PV GV V+NCT  NT NGVRIKTW AS   G+  ++HF DII+ NVSNP++IDQ YC +N+CN+ +PS++KISK
Subjt:  ---------PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISK

Query:  VSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISLT
        VSF+NIKG+S T  A+ L+ S  +PC+ ++V +I +T
Subjt:  VSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISLT

Q39766 Polygalacturonase1.5e-4133.65Show/hide
Query:  DVTQDACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHG---DSWITF-------------------AWKQTNQSHQRDM------
        D  ++ACA V PS VVIPKG + +S+   +GPCK+PIEI ++GT+QAP  P      +W+ F                      + N    R+       
Subjt:  DVTQDACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHG---DSWITF-------------------AWKQTNQSHQRDM------

Query:  -------------------------------------------------------------------------------------------PGHDISIGS
                                                                                                   PGH ISIGS
Subjt:  -------------------------------------------------------------------------------------------PGHDISIGS

Query:  LGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISKVSFKNIKGSSATPVAIKL
        LGK+ NEEPVEG+ + NCTI NT+NG RIKTW      G  + +HF DI M NVS+PILIDQ+YC WN+C +   SK+K+S +SFKNI+G+SA P AIK 
Subjt:  LGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISKVSFKNIKGSSATPVAIKL

Query:  ICSSDIPCDEVKVANISL
        ICS   PC  V++A+I +
Subjt:  ICSSDIPCDEVKVANISL

Q39786 Polygalacturonase1.5e-4133.65Show/hide
Query:  DVTQDACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHG---DSWITF-------------------AWKQTNQSHQRDM------
        D  ++ACA V PS VVIPKG + +S+   +GPCK+PIEI ++GT+QAP  P      +W+ F                      + N    R+       
Subjt:  DVTQDACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPHG---DSWITF-------------------AWKQTNQSHQRDM------

Query:  -------------------------------------------------------------------------------------------PGHDISIGS
                                                                                                   PGH ISIGS
Subjt:  -------------------------------------------------------------------------------------------PGHDISIGS

Query:  LGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISKVSFKNIKGSSATPVAIKL
        LGK+ NEEPVEG+ + NCTI NT+NG RIKTW      G  + +HF DI M NVS+PILIDQ+YC WN+C +   SK+K+S +SFKNI+G+SA P AIK 
Subjt:  LGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISKVSFKNIKGSSATPVAIKL

Query:  ICSSDIPCDEVKVANISL
        ICS   PC  V++A+I +
Subjt:  ICSSDIPCDEVKVANISL

Q40312 Polygalacturonase2.2e-4059.84Show/hide
Query:  PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISKVSFKNIKGS
        PGH +S+GSLGK+T EE VEG+ VKNCT+  T NGVRIKTW  +P T   +++HF DI M NV NP++IDQEY  WNQC++K PSKIK+SK+SFKN+KG+
Subjt:  PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISKVSFKNIKGS

Query:  SATPVAIKLICSSDIPCDEVKVANISL
        S T   + LICSS +PCD V++ N+ L
Subjt:  SATPVAIKLICSSDIPCDEVKVANISL

Q40312 Polygalacturonase2.7e-0637.7Show/hide
Query:  DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPH----GDSWITFAW
        +ACA    + +VIP G ++++  + KGPCK+PIE+++ GT+QAP  P      + W  F +
Subjt:  DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHPH----GDSWITFAW

Arabidopsis top hitse value%identityAlignment
AT3G07820.1 Pectin lyase-like superfamily protein3.8e-4031.8Show/hide
Query:  SGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTH--PHGDSWITF--------------------AWKQTN---
        SG+D+TQ        AC    PS VVIPKG FK+ E + +GPCK+PIE+ L+GT++A  +     + W+ F                    AW+  N   
Subjt:  SGADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTH--PHGDSWITF--------------------AWKQTN---

Query:  -----------------QSHQRDM----------------------------------------------------------------------------
                          S  RD+                                                                            
Subjt:  -----------------QSHQRDM----------------------------------------------------------------------------

Query:  PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISKVSFKNIKGS
        PGH IS+GSLG+Y +E+ V G+ V NCT+  T NG+RIKTW ++  +  A+++HF DII+ +VSNPILIDQEYC WNQCN++  S IK+  +SFKNI+G+
Subjt:  PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISKVSFKNIKGS

Query:  SATPVAIKLICSSDIPCDEVKVANISL
        S    A+KL+CS   PC  V++ +I +
Subjt:  SATPVAIKLICSSDIPCDEVKVANISL

AT3G07830.1 Pectin lyase-like superfamily protein7.1e-3931.9Show/hide
Query:  GADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHP-HG-DSWITF--------------------AWKQTN----
        G+D+TQ        AC    P  VVIPKG FK+ E    GPCKSP+EI L GT+ A  +  HG + W+ F                    AW+  N    
Subjt:  GADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAPTHP-HG-DSWITF--------------------AWKQTN----

Query:  ----------------QSHQRDM----------------------------------------------------------------------------P
                         +  RD+                                                                            P
Subjt:  ----------------QSHQRDM----------------------------------------------------------------------------P

Query:  GHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISKVSFKNIKGSS
        GH IS+GSLG+Y +E+ V G+ V NCT+  T NG+RIKTW ++  +  A+N+HF +II+ NVSNPILIDQEYC WNQCN++  S IK++ +SF+ I+G+S
Subjt:  GHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISKVSFKNIKGSS

Query:  ATPVAIKLICSSDIPCDEVKVANISL
            A+KL+CS   PC+ V+V +I++
Subjt:  ATPVAIKLICSSDIPCDEVKVANISL

AT3G07840.1 Pectin lyase-like superfamily protein1.6e-3831.9Show/hide
Query:  GADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQA--PTHPHGDSWITF--------------------AWKQTN----
        G+D+TQ        AC     S VVI KG FK+ E +  GPCK+P+EI L+GTL+A        + W+ F                    AW+  N    
Subjt:  GADVTQ-------DACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQA--PTHPHGDSWITF--------------------AWKQTN----

Query:  ----------------QSHQRDM----------------------------------------------------------------------------P
                         +  RD+                                                                            P
Subjt:  ----------------QSHQRDM----------------------------------------------------------------------------P

Query:  GHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISKVSFKNIKGSS
        GH IS+GSLG+Y +E+ V G+ V NCT+  T NG+RIKTW ++     A+ +HF +II+ NVSNPILIDQEYC WNQCN++ PS IK+  +SFKNI+G+S
Subjt:  GHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISKVSFKNIKGSS

Query:  ATPVAIKLICSSDIPCDEVKVANISL
            A+KL+CS   PC  V++ NI+L
Subjt:  ATPVAIKLICSSDIPCDEVKVANISL

AT3G07850.1 Pectin lyase-like superfamily protein7.9e-3858.27Show/hide
Query:  PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISKVSFKNIKGS
        PGH ISIGSLG+Y NE+PV+GV V+ C I NT NGVRIKTW  SP  GIA+N+ F DI M NVS P+LIDQEYC +  C   +PS++K+S V+ K IKG+
Subjt:  PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISKVSFKNIKGS

Query:  SATPVAIKLICSSDIPCDEVKVANISL
        SAT VA+KL+CS  +PC  + +++I+L
Subjt:  SATPVAIKLICSSDIPCDEVKVANISL

AT3G07850.1 Pectin lyase-like superfamily protein4.7e-0640.98Show/hide
Query:  QDACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAP-----THPHGDSWITF
        ++ACA    S + +PKG + V   +FKGPCK P+ + L G  +AP     T PH   WI F
Subjt:  QDACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAP-----THPHGDSWITF

AT3G14040.1 Pectin lyase-like superfamily protein5.4e-3959.84Show/hide
Query:  PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISKVSFKNIKGS
        PGH ISIGSLG+Y NE+PV+GV V+ C I NT NGVRIKTW  SP  GIA+N+ F DI M NVS P+LIDQEYC +  C   +PSK+K+S V+ KNIKG+
Subjt:  PGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMVNVSNPILIDQEYCSWNQCNRKIPSKIKISKVSFKNIKGS

Query:  SATPVAIKLICSSDIPCDEVKVANISL
        SAT VA+KL+CS  +PC  + +++I+L
Subjt:  SATPVAIKLICSSDIPCDEVKVANISL

AT3G14040.1 Pectin lyase-like superfamily protein6.1e-0640.98Show/hide
Query:  QDACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAP-----THPHGDSWITF
        ++ACA    S + +PKG + V   +FKGPCK P+ + L G  +AP     T PH   WI F
Subjt:  QDACALVRPSGVVIPKGIFKVSEGKFKGPCKSPIEIRLRGTLQAP-----THPHGDSWITF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGGGAAGAAACGAAAATGGGAAGAAACAAAAATGGGGGAGAAGTTACCCACGGCGACTATGGCGTTTTCCGGCGCTCTCCGACGGCTATGGCGTTTCCGGCACT
CTCCGACGGTCCAAGCACGCTCGGTTCGAAGAGAGAAGAAGAAAGAAGTCGTAGGGAGAAGAAAAAGACAGCAGGGGCATTGTTGAGACTCGATCTCATGTCAATGGTTG
TTTTTCCTTTGAGGAAATATGGTGTCCTAGTGTCCGGTGCCGATGTCACTCAGGATGCATGTGCATTGGTTCGTCCAAGTGGTGTTGTTATTCCGAAAGGGATATTTAAA
GTAAGCGAGGGAAAGTTTAAAGGCCCTTGCAAGAGCCCTATTGAAATTCGATTGCGAGGAACATTACAGGCTCCTACACACCCTCATGGAGATAGTTGGATAACTTTTGC
ATGGAAGCAAACGAATCAAAGTCACCAACGTGACATGCCAGGACATGACATAAGCATTGGAAGTCTTGGGAAATACACTAATGAAGAACCTGTTGAAGGAGTCATAGTAA
AGAACTGCACCATAATGAACACCACTAATGGTGTCAGGATCAAAACATGGTCAGCTTCTCCTACCACCGGCATTGCCACCAATATGCATTTTTCGGACATTATAATGGTC
AATGTTAGCAACCCTATTCTCATAGACCAAGAGTATTGTTCATGGAATCAGTGCAATCGAAAGATTCCATCAAAGATCAAGATTAGTAAAGTGAGCTTCAAGAACATTAA
AGGAAGTTCTGCAACTCCAGTAGCAATCAAGCTTATTTGTAGTAGTGACATACCATGTGACGAAGTAAAAGTAGCCAACATCTCACTTACAATGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGGGAAGAAACGAAAATGGGAAGAAACAAAAATGGGGGAGAAGTTACCCACGGCGACTATGGCGTTTTCCGGCGCTCTCCGACGGCTATGGCGTTTCCGGCACT
CTCCGACGGTCCAAGCACGCTCGGTTCGAAGAGAGAAGAAGAAAGAAGTCGTAGGGAGAAGAAAAAGACAGCAGGGGCATTGTTGAGACTCGATCTCATGTCAATGGTTG
TTTTTCCTTTGAGGAAATATGGTGTCCTAGTGTCCGGTGCCGATGTCACTCAGGATGCATGTGCATTGGTTCGTCCAAGTGGTGTTGTTATTCCGAAAGGGATATTTAAA
GTAAGCGAGGGAAAGTTTAAAGGCCCTTGCAAGAGCCCTATTGAAATTCGATTGCGAGGAACATTACAGGCTCCTACACACCCTCATGGAGATAGTTGGATAACTTTTGC
ATGGAAGCAAACGAATCAAAGTCACCAACGTGACATGCCAGGACATGACATAAGCATTGGAAGTCTTGGGAAATACACTAATGAAGAACCTGTTGAAGGAGTCATAGTAA
AGAACTGCACCATAATGAACACCACTAATGGTGTCAGGATCAAAACATGGTCAGCTTCTCCTACCACCGGCATTGCCACCAATATGCATTTTTCGGACATTATAATGGTC
AATGTTAGCAACCCTATTCTCATAGACCAAGAGTATTGTTCATGGAATCAGTGCAATCGAAAGATTCCATCAAAGATCAAGATTAGTAAAGTGAGCTTCAAGAACATTAA
AGGAAGTTCTGCAACTCCAGTAGCAATCAAGCTTATTTGTAGTAGTGACATACCATGTGACGAAGTAAAAGTAGCCAACATCTCACTTACAATGGAATAA
Protein sequenceShow/hide protein sequence
MGREETKMGRNKNGGEVTHGDYGVFRRSPTAMAFPALSDGPSTLGSKREEERSRREKKKTAGALLRLDLMSMVVFPLRKYGVLVSGADVTQDACALVRPSGVVIPKGIFK
VSEGKFKGPCKSPIEIRLRGTLQAPTHPHGDSWITFAWKQTNQSHQRDMPGHDISIGSLGKYTNEEPVEGVIVKNCTIMNTTNGVRIKTWSASPTTGIATNMHFSDIIMV
NVSNPILIDQEYCSWNQCNRKIPSKIKISKVSFKNIKGSSATPVAIKLICSSDIPCDEVKVANISLTME