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Spg006343 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006343
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationscaffold4:6004487..6007633
RNA-Seq ExpressionSpg006343
SyntenySpg006343
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589130.1 hypothetical protein SDJN03_17695, partial [Cucurbita argyrosperma subsp. sororia]1.6e-5781.62Show/hide
Query:  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRM
        + E+LDGATI+NFVED+E FG  +RERF+HLD + DGVLSY EMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGK+D+ EFM ETK+M
Subjt:  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRM

Query:  MLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA
        M+AMANGIGF PVQMVLEENS LK+AVEREST+V A
Subjt:  MLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA

XP_022136066.1 uncharacterized protein LOC111007849 [Momordica charantia]3.9e-5982.35Show/hide
Query:  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRM
        + ELLDGATI++FVEDEE FG T++ERF+HLD++RDGVLSYGEMLRELQSLRV ETHFGIDVKPDPDE+S+VYGSLFL FDRDCNGK+DL EFMAETK+M
Subjt:  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRM

Query:  MLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA
        MLAMANGIG LP+QMVLEEN FLKKAVERE+T++AA
Subjt:  MLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA

XP_022930660.1 uncharacterized protein LOC111437061 [Cucurbita moschata]2.8e-5781.62Show/hide
Query:  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRM
        + E+LD ATI+NFVED+E FG  +RERF+HLD + DGVLSY EMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDC+GK+D+ EFM ETK+M
Subjt:  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRM

Query:  MLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA
        M+AMANGIGF PVQMVLEENSFLKKAVEREST+V A
Subjt:  MLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA

XP_023529818.1 uncharacterized protein LOC111792532 [Cucurbita pepo subsp. pepo]7.3e-5882.35Show/hide
Query:  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRM
        + E+LDGATI+NFVED+E FG  +RERF+HLD + DGVLSY EMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGK+D+ EFM ETK+M
Subjt:  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRM

Query:  MLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA
        M+AMANGIG LPVQMVLEENS LKKAVEREST+V A
Subjt:  MLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA

XP_038888629.1 uncharacterized protein LOC120078427 [Benincasa hispida]7.3e-5882.35Show/hide
Query:  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRM
        + E+LD ATI+NFVEDEEAF  +IRERF+HLD +RDGVL YGEML+ELQSLRV ETHFGID KPDPDELSSVYGSLF QFDRDCNGK+DL EFMAETK+M
Subjt:  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRM

Query:  MLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA
        MLAMANGIGF PVQM+LEENSFLKKAV+REST++AA
Subjt:  MLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA

TrEMBL top hitse value%identityAlignment
A0A1S3C1T0 uncharacterized protein LOC1034956553.9e-5781.62Show/hide
Query:  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRM
        + E+LD ATI+NFVEDEEAF   IRERF+HLD +RDGVL YGEML+ELQSLRVFETHFGID KPDP+ELSSVY SLFLQFDRDCNGK+DL EFMAETK+M
Subjt:  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRM

Query:  MLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA
        MLAMANGIG  PVQM+LEENSFLKKAV+REST++AA
Subjt:  MLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA

A0A5D3DDG8 Calcium-binding EF-hand family protein3.9e-5781.62Show/hide
Query:  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRM
        + E+LD ATI+NFVEDEEAF   IRERF+HLD +RDGVL YGEML+ELQSLRVFETHFGID KPDP+ELSSVY SLFLQFDRDCNGK+DL EFMAETK+M
Subjt:  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRM

Query:  MLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA
        MLAMANGIG  PVQM+LEENSFLKKAV+REST++AA
Subjt:  MLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA

A0A6J1C2G7 uncharacterized protein LOC1110078491.9e-5982.35Show/hide
Query:  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRM
        + ELLDGATI++FVEDEE FG T++ERF+HLD++RDGVLSYGEMLRELQSLRV ETHFGIDVKPDPDE+S+VYGSLFL FDRDCNGK+DL EFMAETK+M
Subjt:  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRM

Query:  MLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA
        MLAMANGIG LP+QMVLEEN FLKKAVERE+T++AA
Subjt:  MLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA

A0A6J1EXF9 uncharacterized protein LOC1114370611.3e-5781.62Show/hide
Query:  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRM
        + E+LD ATI+NFVED+E FG  +RERF+HLD + DGVLSY EMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDC+GK+D+ EFM ETK+M
Subjt:  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRM

Query:  MLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA
        M+AMANGIGF PVQMVLEENSFLKKAVEREST+V A
Subjt:  MLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA

A0A6J1JIT4 uncharacterized protein LOC1114861991.5e-5680.88Show/hide
Query:  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRM
        + E+LDG+TI+NFVED+E FG  +RERF+HLD + DGVLSY EMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRD +GK+D+ EFM ETK+M
Subjt:  AAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRM

Query:  MLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA
        M+AMANGIGF PVQMVLEENSFLKKAVEREST+V A
Subjt:  MLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G54530.1 Calcium-binding EF hand family protein6.0e-1032.03Show/hide
Query:  LLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMMLA
        ++   T+I F+ D ++F +   + F  LD +++G+LS  E+ + L ++   E+    +V P  DE  +VY ++F +F  D   K +  + +AE   ++ A
Subjt:  LLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMMLA

Query:  MANGIGFLPVQMVLEENSFLKKAVERES
        MA GIG  PV MV+  +  + KAV  ES
Subjt:  MANGIGFLPVQMVLEENSFLKKAVERES

AT2G44310.1 Calcium-binding EF-hand family protein5.6e-3245.86Show/hide
Query:  LLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMMLA
        L+DG+T+ +FV+DEE F  ++ ERF  LD N+DGVLS  E+ +  +S+R+ E+HFG+DV    DEL+++Y S+F +FD D +G +DL+EF +E K+++LA
Subjt:  LLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMMLA

Query:  MANGIGFLPVQMVL--EENSFLKKAVERESTRV
        +A+G+G  P+ MVL  ++++FLKKA + E++++
Subjt:  MANGIGFLPVQMVL--EENSFLKKAVERESTRV

AT4G38810.2 Calcium-binding EF-hand family protein4.8e-0723.2Show/hide
Query:  ELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMML
        ++LDG+ I+  VE+E+ F   + ++F  LD + DG LS  E+   +  +       G+  +    +   +Y  +  +F      K+   EF      ++L
Subjt:  ELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKRMML

Query:  AMANGIGFLPVQMVLEENSFLKKAV
         MA G+   P+ ++  +   L + V
Subjt:  AMANGIGFLPVQMVLEENSFLKKAV

AT5G28830.1 calcium-binding EF hand family protein1.5e-0521.17Show/hide
Query:  DWLQNVPNAAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDE
        D L++ P    +LDG  +  F+EDE+ F       F  LD    G L   E+ + L        H G+++   P     +   +  + D D + ++   +
Subjt:  DWLQNVPNAAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDE

Query:  FMAETKRMMLAMANGIGFLPVQMVLEENSFLKKAVER
        F    ++++  +A+ +   P+ +VL    F    + +
Subjt:  FMAETKRMMLAMANGIGFLPVQMVLEENSFLKKAVER


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCGAGATTGGCTCCAGAATGTTCCGAATGCTGCTGAACTTTTGGATGGCGCCACAATTATCAACTTTGTGGAAGACGAAGAAGCTTTTGGTACGACAATTAGAGA
GCGTTTCAATCACCTCGACACCAATAGAGATGGTGTTCTCTCTTATGGAGAGATGTTGAGGGAGTTGCAAAGTCTTAGAGTGTTCGAGACTCATTTCGGGATCGACGTGA
AACCCGACCCGGACGAGCTCTCTTCGGTCTACGGCTCGTTGTTCTTGCAATTTGATCGGGACTGCAATGGAAAAATTGACCTGGATGAGTTCATGGCGGAAACTAAGAGG
ATGATGTTGGCCATGGCGAATGGGATTGGGTTTTTGCCTGTTCAAATGGTGTTGGAAGAAAACAGCTTCTTGAAGAAAGCTGTGGAGAGAGAATCTACTAGAGTGGCTGC
TTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCGAGATTGGCTCCAGAATGTTCCGAATGCTGCTGAACTTTTGGATGGCGCCACAATTATCAACTTTGTGGAAGACGAAGAAGCTTTTGGTACGACAATTAGAGA
GCGTTTCAATCACCTCGACACCAATAGAGATGGTGTTCTCTCTTATGGAGAGATGTTGAGGGAGTTGCAAAGTCTTAGAGTGTTCGAGACTCATTTCGGGATCGACGTGA
AACCCGACCCGGACGAGCTCTCTTCGGTCTACGGCTCGTTGTTCTTGCAATTTGATCGGGACTGCAATGGAAAAATTGACCTGGATGAGTTCATGGCGGAAACTAAGAGG
ATGATGTTGGCCATGGCGAATGGGATTGGGTTTTTGCCTGTTCAAATGGTGTTGGAAGAAAACAGCTTCTTGAAGAAAGCTGTGGAGAGAGAATCTACTAGAGTGGCTGC
TTGA
Protein sequenceShow/hide protein sequence
MNRDWLQNVPNAAELLDGATIINFVEDEEAFGTTIRERFNHLDTNRDGVLSYGEMLRELQSLRVFETHFGIDVKPDPDELSSVYGSLFLQFDRDCNGKIDLDEFMAETKR
MMLAMANGIGFLPVQMVLEENSFLKKAVERESTRVAA