CuGenDBv2

Gene ID	Spg006357
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Pentatricopeptide repeat (PPR) superfamily protein
Genome location	scaffold4:5370380..5376712
RNA-Seq Expression	Spg006357
Synteny	Spg006357
Gene Ontology terms	GO:0005635 - nuclear envelope (cellular component) GO:0005739 - mitochondrion (cellular component) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR029159 - Casein Kinase 2 substrate IPR038985 - At5g43822-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004144893.1 uncharacterized protein At5g43822 isoform X2 [Cucumis sativus]

8.9e-94

87.98

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF+NASSIIGRLQ+LQDPKN+GSLSGMDGI++ALLAKQMESLQL FSSIKKTMEELGNIV+SMEKI RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF
        GKQLVKGGSN PS+KQLQQ+VGLKPSLEDCLNGLMLLC MHRSEY+LKESIVSALPELFWKARNH AQDLSSLHQLLVDQPNI+KEE        VEF+F
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF

Query:  DTILVPEA
        DTILV EA
Subjt:  DTILVPEA

XP_008447827.1 PREDICTED: uncharacterized protein At5g43822 isoform X1 [Cucumis melo]

7.5e-93

86.54

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF+NASSIIGRLQ+LQDPKN+GSLSGMDGI++ALL KQMESLQL FSSIKKTMEELGN+V+SMEKI RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF
        GKQLVKGGSN PS+KQLQQRVGLKPSLEDCLNGLM+LC+MHRSEY LKESIVSALPELFWKARNH AQDLSSLHQLLVDQPNI+KEE        V+F+F
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF

Query:  DTILVPEA
        DTILV EA
Subjt:  DTILVPEA

XP_022928127.1 uncharacterized protein At5g43822 isoform X3 [Cucurbita moschata]

6.2e-95

89.42

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF NASSIIGRLQVLQDP NYGSLSGMDGI+DALLAKQMESLQL+FSSI KTMEELGNIV SMEKI RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF
        GKQL+KGGSN PS KQLQQRVGLKPSLEDCLNGL LLCDMHRSEYHLKES+VSALPELFWK RNHSAQDLSSL QLLVDQPNIRKEE        VEFIF
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF

Query:  DTILVPEA
        DTILVPEA
Subjt:  DTILVPEA

XP_022989465.1 uncharacterized protein At5g43822 isoform X2 [Cucurbita maxima]

2.9e-92

87.02

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Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD
        MEAMVKKYQQRFRKFKDEMD WDELQVRLISQF NASSIIGRLQVLQDP NYGSLSGMDGI+DALLAKQMESLQL+FSSI KTMEELGNIV SMEKI RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF
        GKQL+KGGSN PS KQLQQRVGLKPSLEDCLNGL LLCDMHRSEY+LKES+VSALP+LFWK RNHSAQDLSSL QLLVDQPNIRKEE        VEF+F
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF

Query:  DTILVPEA
        D ILVPEA
Subjt:  DTILVPEA

XP_023529794.1 uncharacterized protein At5g43822 [Cucurbita pepo subsp. pepo]

9.2e-91

87.5

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF NASSIIGRLQVLQDPKNYGSLS   GI+DALLAKQMESLQL+FSSI KTM ELGNIV SMEKI RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF
        GKQL+KGGSN PS KQLQQRVGLKPSLEDCLNGL LLCDMHRSEYHLKES+VS+LPELFWK RNHSAQDLSSL QLLVDQPNIRKEE        VEFIF
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF

Query:  DTILVPEA
        DTILVPEA
Subjt:  DTILVPEA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K4X9 Uncharacterized protein

4.3e-94

87.98

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF+NASSIIGRLQ+LQDPKN+GSLSGMDGI++ALLAKQMESLQL FSSIKKTMEELGNIV+SMEKI RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF
        GKQLVKGGSN PS+KQLQQ+VGLKPSLEDCLNGLMLLC MHRSEY+LKESIVSALPELFWKARNH AQDLSSLHQLLVDQPNI+KEE        VEF+F
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF

Query:  DTILVPEA
        DTILV EA
Subjt:  DTILVPEA

A0A1S3BIA7 uncharacterized protein At5g43822 isoform X1

3.7e-93

86.54

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF+NASSIIGRLQ+LQDPKN+GSLSGMDGI++ALL KQMESLQL FSSIKKTMEELGN+V+SMEKI RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF
        GKQLVKGGSN PS+KQLQQRVGLKPSLEDCLNGLM+LC+MHRSEY LKESIVSALPELFWKARNH AQDLSSLHQLLVDQPNI+KEE        V+F+F
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF

Query:  DTILVPEA
        DTILV EA
Subjt:  DTILVPEA

A0A6J1EJ12 uncharacterized protein At5g43822 isoform X3

3.0e-95

89.42

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF NASSIIGRLQVLQDP NYGSLSGMDGI+DALLAKQMESLQL+FSSI KTMEELGNIV SMEKI RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF
        GKQL+KGGSN PS KQLQQRVGLKPSLEDCLNGL LLCDMHRSEYHLKES+VSALPELFWK RNHSAQDLSSL QLLVDQPNIRKEE        VEFIF
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF

Query:  DTILVPEA
        DTILVPEA
Subjt:  DTILVPEA

A0A6J1EQT0 uncharacterized protein At5g43822 isoform X1

9.9e-91

92.55

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD
        MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQF NASSIIGRLQVLQDP NYGSLSGMDGI+DALLAKQMESLQL+FSSI KTMEELGNIV SMEKI RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEG
        GKQL+KGGSN PS KQLQQRVGLKPSLEDCLNGL LLCDMHRSEYHLKES+VSALPELFWK RNHSAQDLSSL QLLVDQPNIRKEEG
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEG

A0A6J1JMF9 uncharacterized protein At5g43822 isoform X2

1.4e-92

87.02

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD
        MEAMVKKYQQRFRKFKDEMD WDELQVRLISQF NASSIIGRLQVLQDP NYGSLSGMDGI+DALLAKQMESLQL+FSSI KTMEELGNIV SMEKI RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF
        GKQL+KGGSN PS KQLQQRVGLKPSLEDCLNGL LLCDMHRSEY+LKES+VSALP+LFWK RNHSAQDLSSL QLLVDQPNIRKEE        VEF+F
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF

Query:  DTILVPEA
        D ILVPEA
Subjt:  DTILVPEA

SwissProt top hits

e value

%identity

Alignment

Q6NPG7 Uncharacterized protein At5g43822

4.8e-42

47.34

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD
        MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  +YG+L  + GI DA++ +QM  L+ +  S+K  MEE    V + EK+ RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF
        G QL +  S   S +++++R+G+KP + DCL GL +L DMH+SEYHLK SI+S L  L  K    S  DL++L  L+VDQPNI K+E        V+ IF
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF

Query:  DTILVPE
        D I   E
Subjt:  DTILVPE

Arabidopsis top hits

e value

%identity

Alignment

AT5G43822.1 Pentatricopeptide repeat (PPR) superfamily protein

3.4e-43

47.34

Show/hide

Query:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD
        MEA+++K+QQ+FRK K+EM++W+ LQVR +S F+NASSII RLQ +Q+  +YG+L  + GI DA++ +QM  L+ +  S+K  MEE    V + EK+ RD
Subjt:  MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRD

Query:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF
        G QL +  S   S +++++R+G+KP + DCL GL +L DMH+SEYHLK SI+S L  L  K    S  DL++L  L+VDQPNI K+E        V+ IF
Subjt:  GKQLVKGGSNPPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIF

Query:  DTILVPE
        D I   E
Subjt:  DTILVPE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGCCATGGTGAAAAAGTATCAGCAAAGATTCAGAAAGTTCAAGGATGAAATGGATCGCTGGGACGAGCTTCAAGTTCGCTTGATTTCGCAGTTCAAGAATGCTTC
CTCCATCATTGGGAGGTTGCAGGTGCTTCAAGATCCTAAGAATTATGGCAGTCTCTCTGGCATGGATGGCATTATAGATGCGCTATTGGCAAAGCAGATGGAATCCTTGC
AACTCATTTTCTCATCTATTAAAAAAACAATGGAAGAACTTGGGAATATTGTCCATTCCATGGAGAAGATTAGTCGTGATGGGAAGCAATTAGTCAAAGGTGGTTCTAAT
CCGCCATCAATGAAACAACTACAACAAAGAGTTGGTTTAAAACCCAGTCTTGAAGATTGCTTGAACGGGTTAATGCTTCTATGCGACATGCACCGCTCTGAGTACCATCT
TAAAGAATCTATTGTCTCAGCACTTCCAGAACTTTTCTGGAAAGCCAGGAATCATAGTGCCCAAGATCTCAGTTCCTTGCATCAACTTCTGGTTGATCAGCCCAACATTC
GAAAAGAGGAAGGTAGTATGGGGATTCCTTTCATGGTTGAATTCATCTTTGACACCATACTGGTCCCGGAAGCCTAG

mRNA sequence

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Protein sequence

Show/hide protein sequence

MEAMVKKYQQRFRKFKDEMDRWDELQVRLISQFKNASSIIGRLQVLQDPKNYGSLSGMDGIIDALLAKQMESLQLIFSSIKKTMEELGNIVHSMEKISRDGKQLVKGGSN
PPSMKQLQQRVGLKPSLEDCLNGLMLLCDMHRSEYHLKESIVSALPELFWKARNHSAQDLSSLHQLLVDQPNIRKEEGSMGIPFMVEFIFDTILVPEA

Spg006357 (gene) of Sponge gourd (cylindrica) v1 genome