CuGenDBv2

Gene ID	Spg006360
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	translation initiation factor IF-2 isoform X1
Genome location	scaffold4:6164128..6164832
RNA-Seq Expression	Spg006360
Synteny	Spg006360
Gene Ontology terms	GO:0006413 - translational initiation (biological process) GO:0016310 - phosphorylation (biological process) GO:0003743 - translation initiation factor activity (molecular function) GO:0016301 - kinase activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008455486.1 PREDICTED: translation initiation factor IF-2 isoform X1 [Cucumis melo]

2.7e-99

88.21

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Query:  MAKTNKYSSINFNHIYEKNLSSNSKTG-NPSKNPSSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVPDQTR
        MAKTNKY+SINFNHIY+KNLSSNSKTG NPS N + SSSSSSSFA+ATYSSISSPNKSHGRMLVLTRPTPKPITSP VLSPQ QSRP SADHR VPDQ R
Subjt:  MAKTNKYSSINFNHIYEKNLSSNSKTG-NPSKNPSSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVPDQTR

Query:  SQSDSDSISLRPLGRTGTGVIAPSPIPSLEKDKEIPPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRPKSGGGY
         QSDSDSISLRPLGRTGTG IAPSPI  LEK++EI PP VTLHK EKFVPPHLRAGFVGKEERPVNVG+RSREGNQRQYGNYGS  RYGEDGRPKSGGGY
Subjt:  SQSDSDSISLRPLGRTGTGVIAPSPIPSLEKDKEIPPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRPKSGGGY

Query:  ERMRGAGEADLGAMVNRPRSSGNRPSSSG
        ERM+G GEADLGAMVNRPRSSGNRPSSSG
Subjt:  ERMRGAGEADLGAMVNRPRSSGNRPSSSG

XP_022952341.1 uncharacterized protein LOC111455051 isoform X1 [Cucurbita moschata]

1.4e-98

87.77

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Query:  MAKTNKYSSINFNHIYEKNLSSNSKTG-NPSKNPSSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVPDQTR
        MAKTNKY+SIN+NHIY+K+LS NSKTG NPSKNPSSSSSSSSSFASATYSSISS NKSHGRMLVLTRPTPKPI+SPPVLSPQ QSR PSAD R V DQTR
Subjt:  MAKTNKYSSINFNHIYEKNLSSNSKTG-NPSKNPSSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVPDQTR

Query:  SQSDSDSISLRPLGRTGTGVIAPSPIPSLEKDKEIPPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRPKSGGGY
         Q +SDSISLRPLGRTGTG IAPSPIP+LEKDKEIPPP VTLHK EKFVPPHLRAGFVGKEERPV+VG+RSRE NQRQYGNYGSP RYGEDGRPKSGG Y
Subjt:  SQSDSDSISLRPLGRTGTGVIAPSPIPSLEKDKEIPPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRPKSGGGY

Query:  ERMRGAGEADLGAMVNRPRSSGNRPSSSG
        ERM GAGEAD GAMVNRPRSSGNRP+SSG
Subjt:  ERMRGAGEADLGAMVNRPRSSGNRPSSSG

XP_023554572.1 uncharacterized protein LOC111811777 isoform X1 [Cucurbita pepo subsp. pepo]

1.2e-99

87.39

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Query:  MAKTNKYSSINFNHIYEKNLSSNSKTG-NPSKNPSSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVPDQTR
        MAKTNKY+SIN+NHIY+K+LS NSKTG NPSKNPSSSSSSSSSFASATYSSISS NKSHGRMLVLTRPTPKPI+SPPVLSPQ QSR PSAD R V DQTR
Subjt:  MAKTNKYSSINFNHIYEKNLSSNSKTG-NPSKNPSSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVPDQTR

Query:  SQSDSDSISLRPLGRTGTGVIAPSPIPSLEKDKEIPPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRPKSGGGY
         Q +SDSISLRPLGRTGTG IAPSPIP+LEKDKEIPPP VTLHK+EKFVPPHLRAGFVGKEERPVNVG+RSRE NQRQYGNYGSP RYGEDGRPKSGG Y
Subjt:  SQSDSDSISLRPLGRTGTGVIAPSPIPSLEKDKEIPPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRPKSGGGY

Query:  ERMRGAGEADLGAMVNRPRSSGNRPSSSGW
        ER+ GAGEAD GAMVNRPRSSGN P+SSGW
Subjt:  ERMRGAGEADLGAMVNRPRSSGNRPSSSGW

XP_038888443.1 translation initiation factor IF-2 isoform X1 [Benincasa hispida]

5.9e-102

90.25

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Query:  MAKTNKYSSINFNHIYEKNLSSNSKTG-NPSKNP----SSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVP
        MAKTNKY+SINFNHIY+KNLS NSKTG NPSKNP    SSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPP LSPQ Q RPPSADHR VP
Subjt:  MAKTNKYSSINFNHIYEKNLSSNSKTG-NPSKNP----SSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVP

Query:  DQTR-SQSDSDSISLRPLGRTGTGVIAPSPIPSLEKDKEI-PPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRP
        DQTR  QSDSDSISLRPLGRTGTG IAPSPIPSLEKDKEI PP AVTLHK EKFVPPHLRAGFVGKEERPVNVG+RSRE NQRQYGNYGSP RYGEDGRP
Subjt:  DQTR-SQSDSDSISLRPLGRTGTGVIAPSPIPSLEKDKEI-PPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRP

Query:  KSGGGYERMRGAGEADLGAMVNRPRSSGNRPSSSGW
        KSGGGYERM+GAGEA+LGAMVNRPRSSGNRPSSSGW
Subjt:  KSGGGYERMRGAGEADLGAMVNRPRSSGNRPSSSGW

XP_038888444.1 putative protein TPRXL isoform X2 [Benincasa hispida]

1.1e-100

90.21

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Query:  MAKTNKYSSINFNHIYEKNLSSNSKTG-NPSKNP----SSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVP
        MAKTNKY+SINFNHIY+KNLS NSKTG NPSKNP    SSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPP LSPQ Q RPPSADHR VP
Subjt:  MAKTNKYSSINFNHIYEKNLSSNSKTG-NPSKNP----SSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVP

Query:  DQTR-SQSDSDSISLRPLGRTGTGVIAPSPIPSLEKDKEI-PPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRP
        DQTR  QSDSDSISLRPLGRTGTG IAPSPIPSLEKDKEI PP AVTLHK EKFVPPHLRAGFVGKEERPVNVG+RSRE NQRQYGNYGSP RYGEDGRP
Subjt:  DQTR-SQSDSDSISLRPLGRTGTGVIAPSPIPSLEKDKEI-PPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRP

Query:  KSGGGYERMRGAGEADLGAMVNRPRSSGNRPSSSG
        KSGGGYERM+GAGEA+LGAMVNRPRSSGNRPSSSG
Subjt:  KSGGGYERMRGAGEADLGAMVNRPRSSGNRPSSSG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K3D7 Uncharacterized protein

1.1e-101

86.81

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Query:  MAKTNKYSSINFNHIYEKNLSSNSKTG-NPSKNPSSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVPDQTR
        MAKTNKY+SINFNHIY+KNLSSNSKTG NPS N + SSSSSSSFA+ATYSSISSPNKSHGRMLVLTRPTP+PITSP  LSPQ QSRP SADHR VPD  R
Subjt:  MAKTNKYSSINFNHIYEKNLSSNSKTG-NPSKNPSSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVPDQTR

Query:  SQSDSDSISLRPLGRTGTGVIAPSPIPSLEKDKEIPPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRPKSGGGY
         QSDSDSISLRPLGRTGTG IAPSPIP LEKD+EI PP VTLHK EKFVPPHLRAGFVGKEERPVNVG+RSREGNQRQYGNYGS  RYGEDGRPKSGGGY
Subjt:  SQSDSDSISLRPLGRTGTGVIAPSPIPSLEKDKEIPPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRPKSGGGY

Query:  ERMRGAGEADLGAMVNRPRSSGNRPSSSGWYVSLE
        ERM+  GEADLGAMVNRPRSSGNRPSSSGWYVS++
Subjt:  ERMRGAGEADLGAMVNRPRSSGNRPSSSGWYVSLE

A0A1S3C160 translation initiation factor IF-2 isoform X1

1.3e-99

88.21

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Query:  MAKTNKYSSINFNHIYEKNLSSNSKTG-NPSKNPSSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVPDQTR
        MAKTNKY+SINFNHIY+KNLSSNSKTG NPS N + SSSSSSSFA+ATYSSISSPNKSHGRMLVLTRPTPKPITSP VLSPQ QSRP SADHR VPDQ R
Subjt:  MAKTNKYSSINFNHIYEKNLSSNSKTG-NPSKNPSSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVPDQTR

Query:  SQSDSDSISLRPLGRTGTGVIAPSPIPSLEKDKEIPPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRPKSGGGY
         QSDSDSISLRPLGRTGTG IAPSPI  LEK++EI PP VTLHK EKFVPPHLRAGFVGKEERPVNVG+RSREGNQRQYGNYGS  RYGEDGRPKSGGGY
Subjt:  SQSDSDSISLRPLGRTGTGVIAPSPIPSLEKDKEIPPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRPKSGGGY

Query:  ERMRGAGEADLGAMVNRPRSSGNRPSSSG
        ERM+G GEADLGAMVNRPRSSGNRPSSSG
Subjt:  ERMRGAGEADLGAMVNRPRSSGNRPSSSG

A0A6J1GJZ3 uncharacterized protein LOC111455051 isoform X1

6.5e-99

87.77

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Query:  MAKTNKYSSINFNHIYEKNLSSNSKTG-NPSKNPSSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVPDQTR
        MAKTNKY+SIN+NHIY+K+LS NSKTG NPSKNPSSSSSSSSSFASATYSSISS NKSHGRMLVLTRPTPKPI+SPPVLSPQ QSR PSAD R V DQTR
Subjt:  MAKTNKYSSINFNHIYEKNLSSNSKTG-NPSKNPSSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVPDQTR

Query:  SQSDSDSISLRPLGRTGTGVIAPSPIPSLEKDKEIPPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRPKSGGGY
         Q +SDSISLRPLGRTGTG IAPSPIP+LEKDKEIPPP VTLHK EKFVPPHLRAGFVGKEERPV+VG+RSRE NQRQYGNYGSP RYGEDGRPKSGG Y
Subjt:  SQSDSDSISLRPLGRTGTGVIAPSPIPSLEKDKEIPPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRPKSGGGY

Query:  ERMRGAGEADLGAMVNRPRSSGNRPSSSG
        ERM GAGEAD GAMVNRPRSSGNRP+SSG
Subjt:  ERMRGAGEADLGAMVNRPRSSGNRPSSSG

A0A6J1GK55 uncharacterized protein LOC111455051 isoform X2

6.5e-99

87.77

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Query:  MAKTNKYSSINFNHIYEKNLSSNSKTG-NPSKNPSSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVPDQTR
        MAKTNKY+SIN+NHIY+K+LS NSKTG NPSKNPSSSSSSSSSFASATYSSISS NKSHGRMLVLTRPTPKPI+SPPVLSPQ QSR PSAD R V DQTR
Subjt:  MAKTNKYSSINFNHIYEKNLSSNSKTG-NPSKNPSSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVPDQTR

Query:  SQSDSDSISLRPLGRTGTGVIAPSPIPSLEKDKEIPPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRPKSGGGY
         Q +SDSISLRPLGRTGTG IAPSPIP+LEKDKEIPPP VTLHK EKFVPPHLRAGFVGKEERPV+VG+RSRE NQRQYGNYGSP RYGEDGRPKSGG Y
Subjt:  SQSDSDSISLRPLGRTGTGVIAPSPIPSLEKDKEIPPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRPKSGGGY

Query:  ERMRGAGEADLGAMVNRPRSSGNRPSSSG
        ERM GAGEAD GAMVNRPRSSGNRP+SSG
Subjt:  ERMRGAGEADLGAMVNRPRSSGNRPSSSG

A0A6J1I0F0 uncharacterized protein LOC111468300 isoform X2

5.2e-96

86.15

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Query:  MAKTNKYSSINFNHIYEKNLSSNSKTG-NPSKNP-SSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVPDQT
        MAKTNKY+SIN+NHIY+K+LS NSKTG NPSKNP SSSSSSSSSFASATYSSISS NKSHGRMLVLTRPTPKPI+S PVLSPQ QSR PSAD R V DQT
Subjt:  MAKTNKYSSINFNHIYEKNLSSNSKTG-NPSKNP-SSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVPDQT

Query:  RSQSDSDSISLRPLGRTGTGVIAPSPIPSLEKDKEIPPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRPKSGGG
          Q +SDSISLRPLGRTGTG IAPSPIP+LEKDKEIPPP VTLHK EKFVPPHLRAGFVGKEERPVNVG+RSRE NQRQYGNYGSP RYGEDGRPKSGG 
Subjt:  RSQSDSDSISLRPLGRTGTGVIAPSPIPSLEKDKEIPPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRPKSGGG

Query:  YERMRGAGEADLGAMVNRPRSSGNRPSSSGW
         ERM GAGEAD G MVNRPRSSGNRP+SSGW
Subjt:  YERMRGAGEADLGAMVNRPRSSGNRPSSSGW

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G54680.1 proteophosphoglycan-related

1.1e-26

42.37

Show/hide

Query:  NKYSSINFNHIYEKNLSSNSKTGNPSKNPSSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVP-DQTRSQSD
        NKY+SINFNHI               K+P SSSSSSS   SA+YSS++   +S+GRMLVLT+ +PKP+ SP      T + PP +   ++P +Q  S  D
Subjt:  NKYSSINFNHIYEKNLSSNSKTGNPSKNPSSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVP-DQTRSQSD

Query:  SDSISLRPLGRTGTGVIAPSPI--PSLEKDKEI--PPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGN---QRQYGNYGSPHR----YGEDGR
           ISLRPLG TG+      PI  P + K  E+  P P     K ++FVPPHLR GFV K+E+P     R R+ N    ++  N   P +    YG+ GR
Subjt:  SDSISLRPLGRTGTGVIAPSPI--PSLEKDKEI--PPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGN---QRQYGNYGSPHR----YGEDGR

Query:  PKSGGGYERMRGAGEADLGAMVNRPRSSGNRPSSSG
        PKS GGYER+R             PR +GNRP +SG
Subjt:  PKSGGGYERMRGAGEADLGAMVNRPRSSGNRPSSSG

Sequences

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CDS sequence

Show/hide CDS sequence

ATGGCAAAAACCAACAAATACTCCTCCATCAATTTCAATCACATCTACGAGAAGAATCTCTCCTCCAATTCCAAAACTGGCAATCCCTCTAAAAACCCATCTTCTTCTTC
TTCTTCTTCCTCCTCTTTCGCCTCTGCAACTTATTCTTCCATTTCTTCCCCTAACAAGTCCCATGGCCGCATGCTCGTCCTGACCCGTCCTACCCCCAAACCCATCACCT
CGCCGCCGGTTCTTTCCCCTCAAACCCAGTCTCGACCCCCATCCGCCGATCATCGTCAAGTTCCGGATCAGACCCGTTCGCAATCCGATTCTGATTCGATCTCTCTTCGT
CCTCTCGGTCGCACTGGTACGGGCGTGATCGCTCCGTCTCCGATTCCGAGCTTGGAGAAGGACAAGGAGATTCCTCCTCCGGCGGTGACGTTGCATAAATCGGAGAAATT
TGTGCCTCCGCATCTCAGGGCGGGTTTCGTCGGGAAGGAGGAGCGACCTGTGAACGTTGGGGTCCGATCTAGAGAGGGGAATCAGAGGCAGTATGGGAATTATGGGTCTC
CGCATCGGTATGGTGAAGATGGGCGGCCGAAATCCGGAGGTGGGTATGAGAGGATGAGAGGGGCGGGTGAGGCAGATCTGGGGGCGATGGTGAATCGGCCAAGATCCAGT
GGGAATCGCCCGAGTTCTAGTGGATGGTACGTTTCTCTCGAATAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MAKTNKYSSINFNHIYEKNLSSNSKTGNPSKNPSSSSSSSSSFASATYSSISSPNKSHGRMLVLTRPTPKPITSPPVLSPQTQSRPPSADHRQVPDQTRSQSDSDSISLR
PLGRTGTGVIAPSPIPSLEKDKEIPPPAVTLHKSEKFVPPHLRAGFVGKEERPVNVGVRSREGNQRQYGNYGSPHRYGEDGRPKSGGGYERMRGAGEADLGAMVNRPRSS
GNRPSSSGWYVSLE

Spg006360 (gene) of Sponge gourd (cylindrica) v1 genome