CuGenDBv2

Gene ID	Spg006376
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	transcription factor VIP1-like
Genome location	scaffold4:4423904..4424626
RNA-Seq Expression	Spg006376
Synteny	Spg006376
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008441523.1 PREDICTED: transcription factor VIP1-like [Cucumis melo]

8.8e-61

65.5

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Query:  MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSLPSLS------PTGARVAVDSFNSKSPKDASASKPRAG
        MDLNFTARKPP TA RMDIE MPEAP R+YHHRRSHSDTSFRFANF+DL+LFD PD+DLSSSLPS S      P+GAR+AVDSFNSKSP+DAS +KPRAG
Subjt:  MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSLPSLS------PTGARVAVDSFNSKSPKDASASKPRAG

Query:  NGNSAS-FGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQKKEKKGE-EEKEGRRR
        NGNSAS F +H  S SMDSDFFEGLGMAGDGS+GEIL GRVT GEKK+GRHRHSNSMDGSLTSSFE +ST  ID S    KK    +K  E    + +R 
Subjt:  NGNSAS-FGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQKKEKKGE-EEKEGRRR

Query:  RKEKEKKNSVAVCRQRRRPATGAKKKEIR
        ++    + S A  ++R+   T   +K+++
Subjt:  RKEKEKKNSVAVCRQRRRPATGAKKKEIR

XP_022956511.1 transcription factor VIP1-like [Cucurbita moschata]

1.8e-61

64.78

Show/hide

Query:  MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSL------PSLSPTGARVAVDSFNSKSPKDASASKPRAG
        MDLNFTARKPPQTA RMDIE MPE P R YHHRRSHSDTSFRFANF+DL+LFD PD DLSSSL      PS +P GAR+A+DSFNSKSP DASASKP+A 
Subjt:  MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSL------PSLSPTGARVAVDSFNSKSPKDASASKPRAG

Query:  NGNSAS--FGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQKKEKKGE-EEKEGRR
        N  SAS  FGAHC S SMDSDFF+GLG+AGDGS+GE+LGGRVTVGEKK+GRHRHSNSMDG+LTSSFEAEST  IDCS    +K    +K  E    + +R
Subjt:  NGNSAS--FGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQKKEKKGE-EEKEGRR

Query:  RRKEKEKKNSVAVCRQRRRPATGAKKKEIR
         ++    + S A  ++R+   T   +K+++
Subjt:  RRKEKEKKNSVAVCRQRRRPATGAKKKEIR

XP_022990404.1 transcription factor VIP1-like [Cucurbita maxima]

1.0e-61

65.22

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Query:  MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSL------PSLSPTGARVAVDSFNSKSPKDASASKPRAG
        MDLNFTARKPPQTA RMDIE MPE PQR YHHRRSHSDTSFRFANF+DL+LFD PD DLSSSL      PS +P GAR+A+DSFNSKSP DASASKP+A 
Subjt:  MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSL------PSLSPTGARVAVDSFNSKSPKDASASKPRAG

Query:  NGNSAS--FGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQKKEKKGE-EEKEGRR
           SAS  FGAHC S SMDSDFF+GLG+AGDGS+GE+LGGRVTVGEKK+GRHRHSNSMDG+LTSSFEAEST  IDCS    KK    +K  E    + +R
Subjt:  NGNSAS--FGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQKKEKKGE-EEKEGRR

Query:  RRKEKEKKNSVAVCRQRRRPATGAKKKEIR
         ++    + S A  ++R+   T   +K+++
Subjt:  RRKEKEKKNSVAVCRQRRRPATGAKKKEIR

XP_023548041.1 transcription factor VIP1-like [Cucurbita pepo subsp. pepo]

2.1e-62

65.65

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Query:  MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSL------PSLSPTGARVAVDSFNSKSPKDASASKPRAG
        MDLNFTARKPPQTA RMDIE MPE PQR YHHRRSHSDTSFRFANF+DL+LFD PD DLSSSL      PS +P GAR+A+DSFNSKSP DASASKP+A 
Subjt:  MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSL------PSLSPTGARVAVDSFNSKSPKDASASKPRAG

Query:  NGNSAS--FGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQKKEKKGE-EEKEGRR
        N  SAS  FGAHC S SMDSDFF+GLG+AGDGS+GE+LGGRVTVGEKK+GRHRHSNSMDG+LTSSFEAEST  IDCS    KK    +K  E    + +R
Subjt:  NGNSAS--FGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQKKEKKGE-EEKEGRR

Query:  RRKEKEKKNSVAVCRQRRRPATGAKKKEIR
         ++    + S A  ++R+   T   +K+++
Subjt:  RRKEKEKKNSVAVCRQRRRPATGAKKKEIR

XP_038886256.1 transcription factor VIP1-like [Benincasa hispida]

9.4e-63

65.94

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Query:  MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSLPSLS------PTGARVAVDSFNSKSPKDASASKPRAG
        MDLNFTARKPP  A +MDIE MPEAP R YHHRRSHSDTSFRFANF+DL+LFDPPD+D SS+LPS S      PTGAR+AVDSFNSKSP+DASA+KPRAG
Subjt:  MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSLPSLS------PTGARVAVDSFNSKSPKDASASKPRAG

Query:  NGNSAS-FGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQKKEKKGE-EEKEGRRR
        NGNSAS F +H  S SMDSDFFEGLGMAGDGS+GE+L GRVT GEKKMGRHRHSNSMDGSLTSSFEA+ST  IDCS    KK    +K  E    + +R 
Subjt:  NGNSAS-FGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQKKEKKGE-EEKEGRRR

Query:  RKEKEKKNSVAVCRQRRRPATGAKKKEIR
        ++    + S A  ++R+   T   +K+++
Subjt:  RKEKEKKNSVAVCRQRRRPATGAKKKEIR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KBC6 BZIP domain-containing protein

4.0e-59

66.67

Show/hide

Query:  MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSLPSLS------PTGARVAVDSFNSKSPKDASASKPRAG
        MDLNFTARKPP T+ RMDIE MPEAP R+YHHRRSHSDTSFRFANF+DL+LFD PD+DLSS+LPS S      P+GAR+AVDSFNSKSP+DAS +KPRA 
Subjt:  MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSLPSLS------PTGARVAVDSFNSKSPKDASASKPRAG

Query:  NGNSAS-FGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQ------KKEKKGEEEK
        NGNSAS F +H  S SMDSDFFEGLGMAGDGS+GEILGGRVT GEKK+ RHRHSNSMDGSLTSSFE +S+ +   + +P+K  +      K+ K+    +
Subjt:  NGNSAS-FGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQ------KKEKKGEEEK

Query:  EGRRRRKEKE
        +   R KE++
Subjt:  EGRRRRKEKE

A0A1S3B3P0 transcription factor VIP1-like

4.3e-61

65.5

Show/hide

Query:  MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSLPSLS------PTGARVAVDSFNSKSPKDASASKPRAG
        MDLNFTARKPP TA RMDIE MPEAP R+YHHRRSHSDTSFRFANF+DL+LFD PD+DLSSSLPS S      P+GAR+AVDSFNSKSP+DAS +KPRAG
Subjt:  MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSLPSLS------PTGARVAVDSFNSKSPKDASASKPRAG

Query:  NGNSAS-FGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQKKEKKGE-EEKEGRRR
        NGNSAS F +H  S SMDSDFFEGLGMAGDGS+GEIL GRVT GEKK+GRHRHSNSMDGSLTSSFE +ST  ID S    KK    +K  E    + +R 
Subjt:  NGNSAS-FGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQKKEKKGE-EEKEGRRR

Query:  RKEKEKKNSVAVCRQRRRPATGAKKKEIR
        ++    + S A  ++R+   T   +K+++
Subjt:  RKEKEKKNSVAVCRQRRRPATGAKKKEIR

A0A5A7UMX9 Transcription factor VIP1-like

4.3e-61

65.5

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Query:  MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSLPSLS------PTGARVAVDSFNSKSPKDASASKPRAG
        MDLNFTARKPP TA RMDIE MPEAP R+YHHRRSHSDTSFRFANF+DL+LFD PD+DLSSSLPS S      P+GAR+AVDSFNSKSP+DAS +KPRAG
Subjt:  MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSLPSLS------PTGARVAVDSFNSKSPKDASASKPRAG

Query:  NGNSAS-FGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQKKEKKGE-EEKEGRRR
        NGNSAS F +H  S SMDSDFFEGLGMAGDGS+GEIL GRVT GEKK+GRHRHSNSMDGSLTSSFE +ST  ID S    KK    +K  E    + +R 
Subjt:  NGNSAS-FGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQKKEKKGE-EEKEGRRR

Query:  RKEKEKKNSVAVCRQRRRPATGAKKKEIR
        ++    + S A  ++R+   T   +K+++
Subjt:  RKEKEKKNSVAVCRQRRRPATGAKKKEIR

A0A6J1GWS4 transcription factor VIP1-like

8.6e-62

64.78

Show/hide

Query:  MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSL------PSLSPTGARVAVDSFNSKSPKDASASKPRAG
        MDLNFTARKPPQTA RMDIE MPE P R YHHRRSHSDTSFRFANF+DL+LFD PD DLSSSL      PS +P GAR+A+DSFNSKSP DASASKP+A 
Subjt:  MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSL------PSLSPTGARVAVDSFNSKSPKDASASKPRAG

Query:  NGNSAS--FGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQKKEKKGE-EEKEGRR
        N  SAS  FGAHC S SMDSDFF+GLG+AGDGS+GE+LGGRVTVGEKK+GRHRHSNSMDG+LTSSFEAEST  IDCS    +K    +K  E    + +R
Subjt:  NGNSAS--FGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQKKEKKGE-EEKEGRR

Query:  RRKEKEKKNSVAVCRQRRRPATGAKKKEIR
         ++    + S A  ++R+   T   +K+++
Subjt:  RRKEKEKKNSVAVCRQRRRPATGAKKKEIR

A0A6J1JRY6 transcription factor VIP1-like

5.0e-62

65.22

Show/hide

Query:  MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSL------PSLSPTGARVAVDSFNSKSPKDASASKPRAG
        MDLNFTARKPPQTA RMDIE MPE PQR YHHRRSHSDTSFRFANF+DL+LFD PD DLSSSL      PS +P GAR+A+DSFNSKSP DASASKP+A 
Subjt:  MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSL------PSLSPTGARVAVDSFNSKSPKDASASKPRAG

Query:  NGNSAS--FGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQKKEKKGE-EEKEGRR
           SAS  FGAHC S SMDSDFF+GLG+AGDGS+GE+LGGRVTVGEKK+GRHRHSNSMDG+LTSSFEAEST  IDCS    KK    +K  E    + +R
Subjt:  NGNSAS--FGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQKKEKKGE-EEKEGRR

Query:  RRKEKEKKNSVAVCRQRRRPATGAKKKEIR
         ++    + S A  ++R+   T   +K+++
Subjt:  RRKEKEKKNSVAVCRQRRRPATGAKKKEIR

SwissProt top hits

e value

%identity

Alignment

Q9MA75 Transcription factor VIP1

8.1e-09

34.6

Show/hide

Query:  PQTAVRMDIELMPEAP-QRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSS--------------SLPSLSPTGARVAVDSFNSKSPKDASASKPRAGN
        P   +  +IE MPEAP QR  HHRR+ S+T F   + +DL+LFDP D+D SS                P  SP        S N   P ++   KP    
Subjt:  PQTAVRMDIELMPEAP-QRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSS--------------SLPSLSPTGARVAVDSFNSKSPKDASASKPRAGN

Query:  GNSASFGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRH--SNSMDGSLTS-SFEAESTDEIDCSSSPEKKKQKKEKKGEEEKEGRRR
           A FG H  SFS+DSDFF+ LG+  +           + GEKK G H H  SNSMDG ++S SF  ES   I  S S +   +K    G +       
Subjt:  GNSASFGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRH--SNSMDGSLTS-SFEAESTDEIDCSSSPEKKKQKKEKKGEEEKEGRRR

Query:  RKEKEKKNSVAVCRQRRRPATGAKKKEIRREEDGEEK
           K  K  +A     R+ A  +K+++IR   + E K
Subjt:  RKEKEKKNSVAVCRQRRRPATGAKKKEIRREEDGEEK

Arabidopsis top hits

e value

%identity

Alignment

AT1G43700.1 VIRE2-interacting protein 1

5.8e-10

34.6

Show/hide

Query:  PQTAVRMDIELMPEAP-QRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSS--------------SLPSLSPTGARVAVDSFNSKSPKDASASKPRAGN
        P   +  +IE MPEAP QR  HHRR+ S+T F   + +DL+LFDP D+D SS                P  SP        S N   P ++   KP    
Subjt:  PQTAVRMDIELMPEAP-QRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSS--------------SLPSLSPTGARVAVDSFNSKSPKDASASKPRAGN

Query:  GNSASFGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRH--SNSMDGSLTS-SFEAESTDEIDCSSSPEKKKQKKEKKGEEEKEGRRR
           A FG H  SFS+DSDFF+ LG+  +           + GEKK G H H  SNSMDG ++S SF  ES   I  S S +   +K    G +       
Subjt:  GNSASFGAHCGSFSMDSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRH--SNSMDGSLTS-SFEAESTDEIDCSSSPEKKKQKKEKKGEEEKEGRRR

Query:  RKEKEKKNSVAVCRQRRRPATGAKKKEIRREEDGEEK
           K  K  +A     R+ A  +K+++IR   + E K
Subjt:  RKEKEKKNSVAVCRQRRRPATGAKKKEIRREEDGEEK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATTTGAACTTCACCGCCCGGAAACCCCCGCAGACGGCGGTGAGGATGGACATAGAACTGATGCCGGAGGCTCCACAGCGTGCTTATCACCACCGTCGTTCCCACTC
CGATACCTCCTTCCGCTTCGCTAATTTCGAGGATCTTATTCTCTTCGACCCTCCCGACCTCGATTTGTCATCTTCCCTTCCTTCTCTGTCGCCGACGGGGGCTCGTGTGG
CTGTCGATTCCTTCAATTCCAAGTCCCCTAAAGATGCCTCTGCCTCGAAACCTAGGGCTGGTAACGGCAACTCCGCTTCCTTCGGCGCTCACTGCGGGAGCTTTTCGATG
GATTCCGACTTCTTCGAGGGCTTGGGGATGGCCGGAGATGGCAGCAACGGTGAGATACTCGGCGGGAGAGTGACGGTTGGGGAGAAGAAAATGGGCCGCCATAGGCATAG
TAATTCCATGGATGGCTCTTTGACGTCCTCGTTTGAAGCTGAGTCCACCGACGAAATTGATTGCTCCTCCTCCCCGGAAAAAAAAAAACAGAAGAAAGAAAAGAAAGGAG
AAGAAGAGAAGGAAGGAAGAAGAAGAAGGAAGGAAAAAGAAAAAAAAAATTCAGTCGCCGTTTGCCGGCAGCGACGGCGGCCGGCCACCGGAGCGAAGAAGAAGGAGATA
AGGAGAGAAGAAGATGGAGAGGAGAAAGAAGATGGAGAAGAAAGAAAGAGAGAGAATTTTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDLNFTARKPPQTAVRMDIELMPEAPQRAYHHRRSHSDTSFRFANFEDLILFDPPDLDLSSSLPSLSPTGARVAVDSFNSKSPKDASASKPRAGNGNSASFGAHCGSFSM
DSDFFEGLGMAGDGSNGEILGGRVTVGEKKMGRHRHSNSMDGSLTSSFEAESTDEIDCSSSPEKKKQKKEKKGEEEKEGRRRRKEKEKKNSVAVCRQRRRPATGAKKKEI
RREEDGEEKEDGEERKRENF

Spg006376 (gene) of Sponge gourd (cylindrica) v1 genome