CuGenDBv2

Gene ID	Spg006402
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X1
Genome location	scaffold2:49307648..49308316
RNA-Seq Expression	Spg006402
Synteny	Spg006402
Gene Ontology terms	GO:0010196 - nonphotochemical quenching (biological process) GO:0042651 - thylakoid membrane (cellular component)
InterPro domains	IPR023198 - Phosphoglycolate phosphatase-like, domain 2 IPR023214 - HAD superfamily IPR036412 - HAD-like superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7024023.1 hypothetical protein SDJN02_15052, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.0e-50

84.68

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Query:  MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR
        MESS+ALKYLSPSPPL  SARL FFS+KLRGTRPTSVP + LEW+SK FVF +KM VKA  KVEETS +ES+YKSEWGKVSAVLFDMDGVLCNSEDLSRR
Subjt:  MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR

Query:  AAVDVFSELGVEVTPEDFVPFMGT
        A VDVFSELGVEVTPEDFVPFMGT
Subjt:  AAVDVFSELGVEVTPEDFVPFMGT

XP_022159017.1 NHL repeat-containing protein 2 isoform X1 [Momordica charantia]

8.0e-51

87.1

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Query:  MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR
        MESSMAL+YLSPSPPLTPS R+ FFS KL   RPTSVP+  LEW+SK FV SRKMAVKACVKVEETS QESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR
Subjt:  MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR

Query:  AAVDVFSELGVEVTPEDFVPFMGT
        AAVDVFS+LGVEVTPEDFVPFMGT
Subjt:  AAVDVFSELGVEVTPEDFVPFMGT

XP_022159028.1 uncharacterized protein LOC111025459 isoform X2 [Momordica charantia]

8.0e-51

87.1

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Query:  MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR
        MESSMAL+YLSPSPPLTPS R+ FFS KL   RPTSVP+  LEW+SK FV SRKMAVKACVKVEETS QESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR
Subjt:  MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR

Query:  AAVDVFSELGVEVTPEDFVPFMGT
        AAVDVFS+LGVEVTPEDFVPFMGT
Subjt:  AAVDVFSELGVEVTPEDFVPFMGT

XP_022961409.1 protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X3 [Cucurbita moschata]

1.0e-50

84.68

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Query:  MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR
        MESS+ALKYLSPSPPL  SARL FFS+KLRGTRPTSVP + LEW+SK FVF +KM VKA  KVEETS +ES+YKSEWGKVSAVLFDMDGVLCNSEDLSRR
Subjt:  MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR

Query:  AAVDVFSELGVEVTPEDFVPFMGT
        A VDVFSELGVEVTPEDFVPFMGT
Subjt:  AAVDVFSELGVEVTPEDFVPFMGT

XP_038878874.1 protein SUPPRESSOR OF QUENCHING 1, chloroplastic [Benincasa hispida]

1.0e-53

88.71

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Query:  MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR
        MESSMALKYLSPSPPLT SARL FFS+KLRGT+PTSVP+Y LEW+SK  VFSRKMAVKACVKVEE+S +ES+YKSEWGKVSAVLFDMDGVLCNSEDLSRR
Subjt:  MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR

Query:  AAVDVFSELGVEVTPEDFVPFMGT
        AAVDVF ELGVEVTPEDFVPFMGT
Subjt:  AAVDVFSELGVEVTPEDFVPFMGT

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DXP4 uncharacterized protein LOC111025459 isoform X2

3.9e-51

87.1

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Query:  MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR
        MESSMAL+YLSPSPPLTPS R+ FFS KL   RPTSVP+  LEW+SK FV SRKMAVKACVKVEETS QESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR
Subjt:  MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR

Query:  AAVDVFSELGVEVTPEDFVPFMGT
        AAVDVFS+LGVEVTPEDFVPFMGT
Subjt:  AAVDVFSELGVEVTPEDFVPFMGT

A0A6J1DYP0 NHL repeat-containing protein 2 isoform X1

3.9e-51

87.1

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Query:  MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR
        MESSMAL+YLSPSPPLTPS R+ FFS KL   RPTSVP+  LEW+SK FV SRKMAVKACVKVEETS QESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR
Subjt:  MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR

Query:  AAVDVFSELGVEVTPEDFVPFMGT
        AAVDVFS+LGVEVTPEDFVPFMGT
Subjt:  AAVDVFSELGVEVTPEDFVPFMGT

A0A6J1HA45 protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X1

5.1e-51

84.68

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Query:  MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR
        MESS+ALKYLSPSPPL  SARL FFS+KLRGTRPTSVP + LEW+SK FVF +KM VKA  KVEETS +ES+YKSEWGKVSAVLFDMDGVLCNSEDLSRR
Subjt:  MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR

Query:  AAVDVFSELGVEVTPEDFVPFMGT
        A VDVFSELGVEVTPEDFVPFMGT
Subjt:  AAVDVFSELGVEVTPEDFVPFMGT

A0A6J1HBQ3 protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X2

5.1e-51

84.68

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Query:  MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR
        MESS+ALKYLSPSPPL  SARL FFS+KLRGTRPTSVP + LEW+SK FVF +KM VKA  KVEETS +ES+YKSEWGKVSAVLFDMDGVLCNSEDLSRR
Subjt:  MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR

Query:  AAVDVFSELGVEVTPEDFVPFMGT
        A VDVFSELGVEVTPEDFVPFMGT
Subjt:  AAVDVFSELGVEVTPEDFVPFMGT

A0A6J1HDY1 protein SUPPRESSOR OF QUENCHING 1, chloroplastic isoform X3

5.1e-51

84.68

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Query:  MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR
        MESS+ALKYLSPSPPL  SARL FFS+KLRGTRPTSVP + LEW+SK FVF +KM VKA  KVEETS +ES+YKSEWGKVSAVLFDMDGVLCNSEDLSRR
Subjt:  MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRR

Query:  AAVDVFSELGVEVTPEDFVPFMGT
        A VDVFSELGVEVTPEDFVPFMGT
Subjt:  AAVDVFSELGVEVTPEDFVPFMGT

SwissProt top hits

e value

%identity

Alignment

Q8VZ10 Protein SUPPRESSOR OF QUENCHING 1, chloroplastic

5.8e-20

52.85

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Query:  MALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVF-SRKMAVKACVK--VEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRRA
        MALK  SP    + S RLS  S+ L   R  S       ++S+  V+ S+  A+++  K  V   S   +    +WGKVSAVLFDMDGVLCNSEDLSRRA
Subjt:  MALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVF-SRKMAVKACVK--VEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRRA

Query:  AVDVFSELGVEVTPEDFVPFMGT
        AVDVF+E+GVEVT +DFVPFMGT
Subjt:  AVDVFSELGVEVTPEDFVPFMGT

Arabidopsis top hits

e value

%identity

Alignment

AT1G56500.1 haloacid dehalogenase-like hydrolase family protein

4.1e-21

52.85

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Query:  MALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVF-SRKMAVKACVK--VEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRRA
        MALK  SP    + S RLS  S+ L   R  S       ++S+  V+ S+  A+++  K  V   S   +    +WGKVSAVLFDMDGVLCNSEDLSRRA
Subjt:  MALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVF-SRKMAVKACVK--VEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRRA

Query:  AVDVFSELGVEVTPEDFVPFMGT
        AVDVF+E+GVEVT +DFVPFMGT
Subjt:  AVDVFSELGVEVTPEDFVPFMGT

Sequences

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CDS sequence

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ATGGAAAGCTCCATGGCCTTGAAGTATCTCTCCCCTTCTCCTCCTCTTACACCTTCAGCCAGATTGAGCTTCTTCTCAACTAAGCTAAGAGGAACAAGACCCACTTCAGT
TCCTCACTATCCTCTCGAATGGAAGTCAAAGCATTTCGTGTTTTCGCGAAAAATGGCGGTTAAAGCTTGTGTAAAGGTGGAGGAGACCAGTGTTCAGGAGAGCTCTTATA
AGAGCGAATGGGGCAAGGTTTCTGCAGTGTTGTTTGACATGGATGGAGTGCTTTGCAATAGCGAGGACCTGTCTCGAAGGGCTGCGGTCGATGTTTTCAGCGAGTTGGGT
GTTGAAGTCACCCCTGAAGACTTTGTGCCATTCATGGGGACTGTTGGTTTGGCGTTGGGAGTTCGACTAATTTACTACAGCTGA

mRNA sequence

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Protein sequence

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MESSMALKYLSPSPPLTPSARLSFFSTKLRGTRPTSVPHYPLEWKSKHFVFSRKMAVKACVKVEETSVQESSYKSEWGKVSAVLFDMDGVLCNSEDLSRRAAVDVFSELG
VEVTPEDFVPFMGTVGLALGVRLIYYS

Spg006402 (gene) of Sponge gourd (cylindrica) v1 genome