; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006416 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006416
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionIntegrase catalytic domain-containing protein
Genome locationscaffold2:49030621..49031286
RNA-Seq ExpressionSpg006416
SyntenySpg006416
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]1.1e-4548.87Show/hide
Query:  MANANNTQTPVMTPATAPFSSPPLNQLLNQVTSIKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLKRIPQPNEGATAGAEDSGTEVNEASSSTTET
        MANA  T  P  + ++A FS+PPLNQ+LNQ+ ++KLDR N+LLWK LALPIL+ YKLEGH  G   CP   +   +   T   E+       ASSS T  
Subjt:  MANANNTQTPVMTPATAPFSSPPLNQLLNQVTSIKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLKRIPQPNEGATAGAEDSGTEVNEASSSTTET

Query:  VMNPQYEAWV----------------------MGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNL
        ++N  +E WV                      MGF N +DLW A QD  GVQS+A+ED+LRQ+ Q +RK + KM +YL VMK + DNLGQ GSPV  R L
Subjt:  VMNPQYEAWV----------------------MGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNL

Query:  VSQVLLGHDEEYNPVVVMIQG
        +SQVLLG DE YN V+V+IQG
Subjt:  VSQVLLGHDEEYNPVVVMIQG

KAA0067279.1 uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa]3.3e-3747.26Show/hide
Query:  NNTQTPVMTPATAPFSSPPLNQLLNQVTSIKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLKRI---PQPNEGATAGAEDSGTEVNEASSSTTETV
        N     V    T  F++P LNQ+LNQ+T+IKLDRGN+LLWK LALPIL+SYKL  H  G   C  K I    QPNE     A +   E   +SSST    
Subjt:  NNTQTPVMTPATAPFSSPPLNQLLNQVTSIKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLKRI---PQPNEGATAGAEDSGTEVNEASSSTTETV

Query:  MNPQYEAWV----------------------MGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNLV
        +NP+YE W+                      MGF NAKDLW A QDL G+QS+AKED+L Q FQ ++K +L M +YLR MKN+ +NLGQA S V +  +V
Subjt:  MNPQYEAWV----------------------MGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNLV

Query:  S
        S
Subjt:  S

TYJ96311.1 uncharacterized protein E5676_scaffold1970G00140 [Cucumis melo var. makuwa]1.7e-3846.8Show/hide
Query:  MANANNTQTPVMTPATAPFSSPPLNQLLNQVTSIKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLKRIPQPNEGATAGAEDSGTEVNEASSSTTET
        MANA  T  P  + ++A FS+PPLNQ+LNQ+ ++KLDR N+LLWK LALPIL+ YKLEGH  G   CP   +   +   T   E+       ASSS T  
Subjt:  MANANNTQTPVMTPATAPFSSPPLNQLLNQVTSIKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLKRIPQPNEGATAGAEDSGTEVNEASSSTTET

Query:  VMNPQYEAWV----------------------MGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNL
        ++N  +E WV                      MGF N +DLW A QD  GVQS+A+ED+LRQ+ Q +RK + KM +YL VMK + DNLGQ GSPV  R L
Subjt:  VMNPQYEAWV----------------------MGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNL

Query:  VSQ
        +SQ
Subjt:  VSQ

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]5.8e-5051.13Show/hide
Query:  NNTQTPVMTP----ATAPFSSPPLNQLLNQVTSIKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLKRIPQPNEGATAGAEDSGTEVNEASSSTTET
        +N  TP++TP    + A F+SPPLNQLLNQ+TSIK+DRGNFLLW+NLALPILRSYKL  +  G K CP   +            D+ T +  ++SS +  
Subjt:  NNTQTPVMTP----ATAPFSSPPLNQLLNQVTSIKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLKRIPQPNEGATAGAEDSGTEVNEASSSTTET

Query:  VMNPQYEAW----------------------VMGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNL
         +NP YEAW                      VMGF  +++LW A+Q+L GVQS+A+ DYL+QVFQQ+ K SL+M +YL++MK+HADNL  AGS VS R+L
Subjt:  VMNPQYEAW----------------------VMGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNL

Query:  VSQVLLGHDEEYNPVVVMIQG
        VSQVL G DEEYNP+VV +QG
Subjt:  VSQVLLGHDEEYNPVVVMIQG

XP_038902487.1 uncharacterized protein LOC120089143 [Benincasa hispida]2.1e-3949.76Show/hide
Query:  TSIKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLK----------RIPQPNEGATAGAEDSGTE-------VNEASSSTTETVMNPQYEA------
        T+IKLD+ N+LLW+NLALPILRSY+LEGH  G   CP +           +P P + A  G + SG         +  AS+S+    +NP YE+      
Subjt:  TSIKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLK----------RIPQPNEGATAGAEDSGTE-------VNEASSSTTETVMNPQYEA------

Query:  ----W------------VMGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNLVSQVLLGHDEEYNP
            W            VMG++N K LWAAIQ+L G+QS+A EDYLRQVFQQ+ K ++KM +YLRVMK H+DNLG  GSPV TR LVSQVLLG DEE+NP
Subjt:  ----W------------VMGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNLVSQVLLGHDEEYNP

Query:  VVVMIQG
         V  IQG
Subjt:  VVVMIQG

TrEMBL top hitse value%identityAlignment
A0A5A7SIT7 Uncharacterized protein5.5e-4648.87Show/hide
Query:  MANANNTQTPVMTPATAPFSSPPLNQLLNQVTSIKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLKRIPQPNEGATAGAEDSGTEVNEASSSTTET
        MANA  T  P  + ++A FS+PPLNQ+LNQ+ ++KLDR N+LLWK LALPIL+ YKLEGH  G   CP   +   +   T   E+       ASSS T  
Subjt:  MANANNTQTPVMTPATAPFSSPPLNQLLNQVTSIKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLKRIPQPNEGATAGAEDSGTEVNEASSSTTET

Query:  VMNPQYEAWV----------------------MGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNL
        ++N  +E WV                      MGF N +DLW A QD  GVQS+A+ED+LRQ+ Q +RK + KM +YL VMK + DNLGQ GSPV  R L
Subjt:  VMNPQYEAWV----------------------MGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNL

Query:  VSQVLLGHDEEYNPVVVMIQG
        +SQVLLG DE YN V+V+IQG
Subjt:  VSQVLLGHDEEYNPVVVMIQG

A0A5A7VPY0 Uncharacterized protein1.6e-3747.26Show/hide
Query:  NNTQTPVMTPATAPFSSPPLNQLLNQVTSIKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLKRI---PQPNEGATAGAEDSGTEVNEASSSTTETV
        N     V    T  F++P LNQ+LNQ+T+IKLDRGN+LLWK LALPIL+SYKL  H  G   C  K I    QPNE     A +   E   +SSST    
Subjt:  NNTQTPVMTPATAPFSSPPLNQLLNQVTSIKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLKRI---PQPNEGATAGAEDSGTEVNEASSSTTETV

Query:  MNPQYEAWV----------------------MGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNLV
        +NP+YE W+                      MGF NAKDLW A QDL G+QS+AKED+L Q FQ ++K +L M +YLR MKN+ +NLGQA S V +  +V
Subjt:  MNPQYEAWV----------------------MGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNLV

Query:  S
        S
Subjt:  S

A0A5D3BCH9 Uncharacterized protein8.5e-3946.8Show/hide
Query:  MANANNTQTPVMTPATAPFSSPPLNQLLNQVTSIKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLKRIPQPNEGATAGAEDSGTEVNEASSSTTET
        MANA  T  P  + ++A FS+PPLNQ+LNQ+ ++KLDR N+LLWK LALPIL+ YKLEGH  G   CP   +   +   T   E+       ASSS T  
Subjt:  MANANNTQTPVMTPATAPFSSPPLNQLLNQVTSIKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLKRIPQPNEGATAGAEDSGTEVNEASSSTTET

Query:  VMNPQYEAWV----------------------MGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNL
        ++N  +E WV                      MGF N +DLW A QD  GVQS+A+ED+LRQ+ Q +RK + KM +YL VMK + DNLGQ GSPV  R L
Subjt:  VMNPQYEAWV----------------------MGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNL

Query:  VSQ
        +SQ
Subjt:  VSQ

A0A6J1D5J0 uncharacterized protein LOC1110175012.2e-3460.71Show/hide
Query:  EDSGTEVNEASSST--TETVMNPQYEAW----------------------VMGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVM
        E S T ++  SSS+  TE  +NP YE+W                      VMG++NA DLWAAIQ+L GVQS+A+EDYLRQVFQQ+RK SLKM+D+LRVM
Subjt:  EDSGTEVNEASSST--TETVMNPQYEAW----------------------VMGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVM

Query:  KNHADNLGQAGSPVSTRNLVSQVLLGHDEEYNPVVVMIQG
        K+HADNLGQAGSPV TR+L+SQVLLG DEEYNPVV  IQG
Subjt:  KNHADNLGQAGSPVSTRNLVSQVLLGHDEEYNPVVVMIQG

A0A6J1DCW4 uncharacterized protein LOC1110195982.8e-5051.13Show/hide
Query:  NNTQTPVMTP----ATAPFSSPPLNQLLNQVTSIKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLKRIPQPNEGATAGAEDSGTEVNEASSSTTET
        +N  TP++TP    + A F+SPPLNQLLNQ+TSIK+DRGNFLLW+NLALPILRSYKL  +  G K CP   +            D+ T +  ++SS +  
Subjt:  NNTQTPVMTP----ATAPFSSPPLNQLLNQVTSIKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLKRIPQPNEGATAGAEDSGTEVNEASSSTTET

Query:  VMNPQYEAW----------------------VMGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNL
         +NP YEAW                      VMGF  +++LW A+Q+L GVQS+A+ DYL+QVFQQ+ K SL+M +YL++MK+HADNL  AGS VS R+L
Subjt:  VMNPQYEAW----------------------VMGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNL

Query:  VSQVLLGHDEEYNPVVVMIQG
        VSQVL G DEEYNP+VV +QG
Subjt:  VSQVLLGHDEEYNPVVVMIQG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)1.0e-0421.82Show/hide
Query:  IKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLKRIPQPNEGATAGAEDSGTEVNEASSSTTETVMNPQYEAWVMGFDNAKDLWAAIQDLLGVQSKA
        + ++  N+  W+ L L    S+ + GH  G+       +P           D   ++     S   T+   Q++   +    ++D+W  I++       A
Subjt:  IKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLKRIPQPNEGATAGAEDSGTEVNEASSSTTETVMNPQYEAWVMGFDNAKDLWAAIQDLLGVQSKA

Query:  KEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNLVSQVLLGHDEEYNPVVVMIQ
        +   L    +      ++++DY R MK  AD+L     PV+ RNLV  VL G + +++ ++ +I+
Subjt:  KEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNLVSQVLLGHDEEYNPVVVMIQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAACGCCAACAATACCCAAACTCCTGTCATGACCCCTGCTACAGCTCCGTTCAGTAGCCCTCCGTTGAATCAACTTTTGAATCAAGTCACCAGCATCAAACTCGA
TAGGGGAAATTTTCTGCTGTGGAAGAACCTTGCCCTACCGATCCTCAGAAGTTACAAACTAGAAGGCCATTTCATTGGCTCAAAATCTTGCCCACTGAAGCGTATTCCGC
AACCAAATGAAGGTGCAACCGCTGGAGCTGAAGACTCTGGAACTGAAGTGAATGAGGCGTCTAGCTCAACCACAGAGACTGTGATGAATCCACAATATGAAGCGTGGGTA
ATGGGTTTTGATAATGCAAAAGACTTATGGGCAGCAATTCAAGACCTGTTAGGTGTTCAATCCAAGGCAAAGGAGGATTACCTCCGTCAGGTATTTCAGCAATCTCGTAA
AAATAGTTTAAAGATGTCTGACTATTTGCGAGTAATGAAAAATCATGCAGATAACCTAGGGCAGGCAGGGAGTCCGGTTTCAACGAGGAATTTGGTGTCACAAGTCTTAT
TGGGACATGATGAGGAGTATAACCCTGTGGTGGTGATGATTCAGGGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAACGCCAACAATACCCAAACTCCTGTCATGACCCCTGCTACAGCTCCGTTCAGTAGCCCTCCGTTGAATCAACTTTTGAATCAAGTCACCAGCATCAAACTCGA
TAGGGGAAATTTTCTGCTGTGGAAGAACCTTGCCCTACCGATCCTCAGAAGTTACAAACTAGAAGGCCATTTCATTGGCTCAAAATCTTGCCCACTGAAGCGTATTCCGC
AACCAAATGAAGGTGCAACCGCTGGAGCTGAAGACTCTGGAACTGAAGTGAATGAGGCGTCTAGCTCAACCACAGAGACTGTGATGAATCCACAATATGAAGCGTGGGTA
ATGGGTTTTGATAATGCAAAAGACTTATGGGCAGCAATTCAAGACCTGTTAGGTGTTCAATCCAAGGCAAAGGAGGATTACCTCCGTCAGGTATTTCAGCAATCTCGTAA
AAATAGTTTAAAGATGTCTGACTATTTGCGAGTAATGAAAAATCATGCAGATAACCTAGGGCAGGCAGGGAGTCCGGTTTCAACGAGGAATTTGGTGTCACAAGTCTTAT
TGGGACATGATGAGGAGTATAACCCTGTGGTGGTGATGATTCAGGGTTGA
Protein sequenceShow/hide protein sequence
MANANNTQTPVMTPATAPFSSPPLNQLLNQVTSIKLDRGNFLLWKNLALPILRSYKLEGHFIGSKSCPLKRIPQPNEGATAGAEDSGTEVNEASSSTTETVMNPQYEAWV
MGFDNAKDLWAAIQDLLGVQSKAKEDYLRQVFQQSRKNSLKMSDYLRVMKNHADNLGQAGSPVSTRNLVSQVLLGHDEEYNPVVVMIQG