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Spg006437 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006437
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGlycine-rich protein family
Genome locationscaffold2:47305672..47307474
RNA-Seq ExpressionSpg006437
SyntenySpg006437
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050947.1 uncharacterized protein E6C27_scaffold761G00740 [Cucumis melo var. makuwa]2.8e-5079.67Show/hide
Query:  MASPIGFLLTVLALATSLRCPSVCA-EEIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNK
        MASPI FL  VLAL  SLRCPSV   +EI GQ+V E+FKCFDNKFIYNGCESAYRL PSGSFNVPPEATNL+CNGPCL+ETQL+LNCLD++F NFLFYNK
Subjt:  MASPIGFLLTVLALATSLRCPSVCA-EEIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNK

Query:  ATSQNVRNALRVGCSYTSQRGRP
        AT+Q+VRNALR+GCS++SQRGRP
Subjt:  ATSQNVRNALRVGCSYTSQRGRP

XP_008450550.1 PREDICTED: uncharacterized protein LOC103492117 [Cucumis melo]3.9e-5271.14Show/hide
Query:  MASPIGFLLTVLALATSLRCPSVCA-EEIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNK
        MASPI FL  VLAL  SLRCPSV   +EI GQ+V E+FKCFDNKFIYNGCESAYRL PSGSFNVPPEATNL+CNGPCL+ETQL+LNCLD++F NFLFYNK
Subjt:  MASPIGFLLTVLALATSLRCPSVCA-EEIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNK

Query:  ATSQNVRNALRVGCSYTSQRGRPQASADHRARVGNFNPGLFMQVEFASA
        AT+Q+VRNALR+GCS++SQR             GNFN GLFMQ E + A
Subjt:  ATSQNVRNALRVGCSYTSQRGRPQASADHRARVGNFNPGLFMQVEFASA

XP_022158829.1 uncharacterized protein LOC111025289 [Momordica charantia]5.9e-5373.65Show/hide
Query:  MASPIGFLLTVLALATSLRCPSVCAEEIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNKA
        MA P  FL  +LALA SL  PSVCAEEIPGQVVTEA +CFDNKFIYNGC+S YRL PSGSFNVPPEATNL+C+GPCLVET+LVL+CLDDAFGNFLFYNKA
Subjt:  MASPIGFLLTVLALATSLRCPSVCAEEIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNKA

Query:  TSQNVRNALRVGCSYTSQRGRPQASADHRARVGNFNPGLFMQVEFASA
         +QNVRNALR GCSY+SQR             GNFNPGLFMQ E + A
Subjt:  TSQNVRNALRVGCSYTSQRGRPQASADHRARVGNFNPGLFMQVEFASA

XP_023529219.1 uncharacterized protein LOC111792117 [Cucurbita pepo subsp. pepo]1.5e-4361.18Show/hide
Query:  MASPIGFLLTVLALATSLRCPSVCAEEIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNKA
        MASP+  LL +     +L C SVC EE+ GQ VT+AF+CFDN  IYNGCESAYRL P+G+ NVP EATNL+CNGPCL+ETQL+LNCLD AF NFLFYNKA
Subjt:  MASPIGFLLTVLALATSLRCPSVCAEEIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNKA

Query:  TSQNVRNALRVGCSYTSQRGRPQASADHRARVGNFNPGLFMQVEFASAFGAL
        T   V+NALR GCSY++QR             GNFNPG FMQ E +    AL
Subjt:  TSQNVRNALRVGCSYTSQRGRPQASADHRARVGNFNPGLFMQVEFASAFGAL

XP_031736077.1 uncharacterized protein LOC101204762 [Cucumis sativus]7.8e-5372Show/hide
Query:  MASPIGFLLTVLALATSLRCPSVCA--EEIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYN
        MASPI FL   LALA  LRCPSV +  +EIPGQ+V E FKCFDNKFIYNGCE AYRL PSGSFNVPPEATNL+CNGPCL+ETQL+LNCLD+ F NFLFYN
Subjt:  MASPIGFLLTVLALATSLRCPSVCA--EEIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYN

Query:  KATSQNVRNALRVGCSYTSQRGRPQASADHRARVGNFNPGLFMQVEFASA
        KAT+Q+VRNALRVGCSY+SQR             GNFN GLFMQ EF+ A
Subjt:  KATSQNVRNALRVGCSYTSQRGRPQASADHRARVGNFNPGLFMQVEFASA

TrEMBL top hitse value%identityAlignment
A0A0A0LYD5 Uncharacterized protein2.7e-5169.43Show/hide
Query:  MASPIGFLLTVLALATSLRCPS----VCAE-----EIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAF
        MASPI FL   LALA  LRCPS    V  E     EIPGQ+V E FKCFDNKFIYNGCE AYRL PSGSFNVPPEATNL+CNGPCL+ETQL+LNCLD+ F
Subjt:  MASPIGFLLTVLALATSLRCPS----VCAE-----EIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAF

Query:  GNFLFYNKATSQNVRNALRVGCSYTSQRGRPQASADHRARVGNFNPGLFMQVEFASA
         NFLFYNKAT+Q+VRNALRVGCSY+SQR             GNFN GLFMQ EF+ A
Subjt:  GNFLFYNKATSQNVRNALRVGCSYTSQRGRPQASADHRARVGNFNPGLFMQVEFASA

A0A1S3BPH6 uncharacterized protein LOC1034921171.9e-5271.14Show/hide
Query:  MASPIGFLLTVLALATSLRCPSVCA-EEIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNK
        MASPI FL  VLAL  SLRCPSV   +EI GQ+V E+FKCFDNKFIYNGCESAYRL PSGSFNVPPEATNL+CNGPCL+ETQL+LNCLD++F NFLFYNK
Subjt:  MASPIGFLLTVLALATSLRCPSVCA-EEIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNK

Query:  ATSQNVRNALRVGCSYTSQRGRPQASADHRARVGNFNPGLFMQVEFASA
        AT+Q+VRNALR+GCS++SQR             GNFN GLFMQ E + A
Subjt:  ATSQNVRNALRVGCSYTSQRGRPQASADHRARVGNFNPGLFMQVEFASA

A0A5A7U972 Uncharacterized protein1.3e-5079.67Show/hide
Query:  MASPIGFLLTVLALATSLRCPSVCA-EEIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNK
        MASPI FL  VLAL  SLRCPSV   +EI GQ+V E+FKCFDNKFIYNGCESAYRL PSGSFNVPPEATNL+CNGPCL+ETQL+LNCLD++F NFLFYNK
Subjt:  MASPIGFLLTVLALATSLRCPSVCA-EEIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNK

Query:  ATSQNVRNALRVGCSYTSQRGRP
        AT+Q+VRNALR+GCS++SQRGRP
Subjt:  ATSQNVRNALRVGCSYTSQRGRP

A0A6J1E0J9 uncharacterized protein LOC1110252892.9e-5373.65Show/hide
Query:  MASPIGFLLTVLALATSLRCPSVCAEEIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNKA
        MA P  FL  +LALA SL  PSVCAEEIPGQVVTEA +CFDNKFIYNGC+S YRL PSGSFNVPPEATNL+C+GPCLVET+LVL+CLDDAFGNFLFYNKA
Subjt:  MASPIGFLLTVLALATSLRCPSVCAEEIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNKA

Query:  TSQNVRNALRVGCSYTSQRGRPQASADHRARVGNFNPGLFMQVEFASA
         +QNVRNALR GCSY+SQR             GNFNPGLFMQ E + A
Subjt:  TSQNVRNALRVGCSYTSQRGRPQASADHRARVGNFNPGLFMQVEFASA

A0A6J1JMH7 uncharacterized protein LOC1114865299.3e-4462.33Show/hide
Query:  MASPIGFLLTVLALATSLRCPSVCAEEIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNKA
        MASP+  LL +   A +L C SVC EE  GQ VT+ F+CFDN  IYNGCESAYRL PSG+ NVP +ATNL+CNGPCL+ETQL+LNCLD AF NFLFYNKA
Subjt:  MASPIGFLLTVLALATSLRCPSVCAEEIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNKA

Query:  TSQNVRNALRVGCSYTSQRGRPQASADHRARVGNFNPGLFMQVEFA
        T   V+NALR GCSY++QR             GNFNPG FMQ E +
Subjt:  TSQNVRNALRVGCSYTSQRGRPQASADHRARVGNFNPGLFMQVEFA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G56320.1 BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT5G49350.2)1.5e-2545.69Show/hide
Query:  GQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNKATSQNVRNALRVGCSYTSQRGR----PQAS
        G +V  A  CF+N  +Y GC  A+RL   G F VPPE T+ +CNGPC  ET+LVL C++    +F+FYN+AT ++VRNALR GCS +  RG       A 
Subjt:  GQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNKATSQNVRNALRVGCSYTSQRGR----PQAS

Query:  ADHRARVGNFNPGLFM
          +  + G   PGLF+
Subjt:  ADHRARVGNFNPGLFM

AT5G49350.1 Glycine-rich protein family2.4e-2040.43Show/hide
Query:  EIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNKATSQNVRNALRVGCSYTSQRG
        E P ++V +A +C + K IY  C+ ++RLT +G  N+P   T  +C GPC  ET L LNC+++   ++ F+N+AT  ++R  L+ GCSY  +RG
Subjt:  EIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNKATSQNVRNALRVGCSYTSQRG

AT5G49350.2 Glycine-rich protein family2.4e-2040.43Show/hide
Query:  EIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNKATSQNVRNALRVGCSYTSQRG
        E P ++V +A +C + K IY  C+ ++RLT +G  N+P   T  +C GPC  ET L LNC+++   ++ F+N+AT  ++R  L+ GCSY  +RG
Subjt:  EIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNKATSQNVRNALRVGCSYTSQRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCCCAATTGGCTTCCTCCTCACCGTTCTCGCTCTCGCCACCTCGCTCCGCTGCCCCTCAGTTTGTGCTGAGGAGATTCCAGGCCAAGTGGTGACTGAGGCCTT
CAAATGTTTTGACAATAAGTTTATATACAATGGGTGTGAAAGTGCTTATAGATTGACCCCAAGTGGGAGTTTCAATGTCCCTCCTGAGGCTACTAATCTGTATTGCAATG
GACCGTGCTTGGTCGAAACACAACTCGTGCTCAACTGCCTTGACGACGCATTTGGAAACTTCTTATTCTACAACAAAGCCACGTCGCAAAATGTTCGAAACGCCCTCCGT
GTCGGCTGCAGCTACACAAGCCAGAGAGGTAGGCCACAGGCTTCTGCTGATCATAGAGCCAGGGTTGGAAACTTCAATCCAGGATTGTTCATGCAAGTTGAATTTGCTTC
CGCCTTTGGAGCCTTAACCATCACACATGGCTCACATGAAGAAACATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCCCAATTGGCTTCCTCCTCACCGTTCTCGCTCTCGCCACCTCGCTCCGCTGCCCCTCAGTTTGTGCTGAGGAGATTCCAGGCCAAGTGGTGACTGAGGCCTT
CAAATGTTTTGACAATAAGTTTATATACAATGGGTGTGAAAGTGCTTATAGATTGACCCCAAGTGGGAGTTTCAATGTCCCTCCTGAGGCTACTAATCTGTATTGCAATG
GACCGTGCTTGGTCGAAACACAACTCGTGCTCAACTGCCTTGACGACGCATTTGGAAACTTCTTATTCTACAACAAAGCCACGTCGCAAAATGTTCGAAACGCCCTCCGT
GTCGGCTGCAGCTACACAAGCCAGAGAGGTAGGCCACAGGCTTCTGCTGATCATAGAGCCAGGGTTGGAAACTTCAATCCAGGATTGTTCATGCAAGTTGAATTTGCTTC
CGCCTTTGGAGCCTTAACCATCACACATGGCTCACATGAAGAAACATAG
Protein sequenceShow/hide protein sequence
MASPIGFLLTVLALATSLRCPSVCAEEIPGQVVTEAFKCFDNKFIYNGCESAYRLTPSGSFNVPPEATNLYCNGPCLVETQLVLNCLDDAFGNFLFYNKATSQNVRNALR
VGCSYTSQRGRPQASADHRARVGNFNPGLFMQVEFASAFGALTITHGSHEET