; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006446 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006446
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold2:48441149..48442280
RNA-Seq ExpressionSpg006446
SyntenySpg006446
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TXG50387.1 hypothetical protein EZV62_022911 [Acer yangbiense]6.1e-2827.32Show/hide
Query:  YSVRSGYKVFLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHRE----DF-----------------RGSFIDRWLKIIGC
        Y+VRSGYKV L+ K  GI SSS  ++  W+ LWK N+PNK K F WK  NG+LP  + L  R     D+                   S ++ W +++G 
Subjt:  YSVRSGYKVFLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHRE----DF-----------------RGSFIDRWLKIIGC

Query:  SSMAEM---------------------GLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSSQQ
          +  +                      L+ +  W +W +RN +++      A     WI ++  EF  AN+     V+  SHQ                
Subjt:  SSMAEM---------------------GLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSSQQ

Query:  TRPSLSNRWLPPPCNTWKLNTDISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYWAIKFILKEVE
          PS    W  P    +K+N D S        G G+IIRD+ G+  AA S  V    +  + E  A LEG+  A+ +G S +I+ESD+   I+ +  +  
Subjt:  TRPSLSNRWLPPPCNTWKLNTDISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYWAIKFILKEVE

Query:  AWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCEAWYDNFPSWLISMVNND
          +++ +++ +  +L  S N + ++ + R AN+VA  I + A  L     W++  P  +  +V  D
Subjt:  AWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCEAWYDNFPSWLISMVNND

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]6.3e-3328.65Show/hide
Query:  NYSVRSGYKVFLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHR-------------------------------------
        NYSVRSGYK++++ K +  S+S+      W  +WK+ VP KIK F+W+  +  +P   NL+ R                                     
Subjt:  NYSVRSGYKVFLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHR-------------------------------------

Query:  ------EDFRGSFIDRWLKIIGCSSMAEMGLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSS
               +   SF++ W  +       ++ L A+T W IWNDRN +I+ + +     +  W++ +          +DSH         S   M   +  +
Subjt:  ------EDFRGSFIDRWLKIIGCSSMAEMGLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSS

Query:  QQTRPSLSNRWLPPPCNTWKLNTDIS-RVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYWAIKFILK
        Q     +   W P    + KLNTD + R +S S    G IIRD   ++ AA+S+ V    +  LAE   ILEGLK+A +  ++ L VESDS  AI+ I  
Subjt:  QQTRPSLSNRWLPPPCNTWKLNTDIS-RVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYWAIKFILK

Query:  EVEAWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCE-AWYDNFPSWLISMVNND
        E+    D ++ +  I +L   F  I F H SR  N  A  + +          AW  NFP+WL+ +V  D
Subjt:  EVEAWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCE-AWYDNFPSWLISMVNND

XP_030487551.1 uncharacterized protein LOC115704487 [Cannabis sativa]6.8e-2726.63Show/hide
Query:  YSVRSGYKVFLNYK--IDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHRE-----------------DFRGSFI--------DRW
        YSV+SGY +    +  +   ++SS P    W   W +N+  KIK F+W+V+   LP  ++LV R+                 D+   +         D  
Subjt:  YSVRSGYKVFLNYK--IDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHRE-----------------DFRGSFI--------DRW

Query:  LKIIGCSSMAEMGLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSS-HQRRSSLNMVQGASSSQQTRPSLSN-RWLPPP
        L +    +  EM  +   +W IW +RN++++          S + ++Y++++  A QK      SS+ HQ  S+      A++SQQ   +    +W PPP
Subjt:  LKIIGCSSMAEMGLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSS-HQRRSSLNMVQGASSSQQTRPSLSN-RWLPPP

Query:  CNTWKLNTDISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYWAIKFILKEVEAWSDVESMLFSIW
         +++KLN D +  +   +IG G ++RD  G++ AA S  +  NFA+H  E  A+   + W L L      +E+D+      +     A S  ++++  I 
Subjt:  CNTWKLNTDISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYWAIKFILKEVEAWSDVESMLFSIW

Query:  SLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCEAWYDNFPSWLISMVNND
         LL S  ++   H+ RNAN  A  + R A  L     W    P  +  ++ ND
Subjt:  SLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCEAWYDNFPSWLISMVNND

XP_030495196.1 uncharacterized protein LOC115710989 [Cannabis sativa]5.9e-3128.95Show/hide
Query:  YSVRSGYKVFLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHRE-------------------------------------
        Y+V+SGY +  +      SSSS+  ++ W+  W + +P KIK F W+VI+  LP  ++LV R+                                     
Subjt:  YSVRSGYKVFLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHRE-------------------------------------

Query:  -DFR---GSFIDRWLKIIGCS-SMAEMGLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSSQQ
         D++     +   +LK +  S + AE   +  T+W IW++RN++++++    A+  + +   Y++ +                 R + L     A+SSQ 
Subjt:  -DFR---GSFIDRWLKIIGCS-SMAEMGLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSSQQ

Query:  TRPSL--SNRWLPPPCNTWKLNTDISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYW---AIKFI
          PS   S  W PPP  T KLN D +   + S IG G +IR++ G + AA S+ +  NFA+H  E  A+  G+ W L    S  IVE+D+     A+K  
Subjt:  TRPSL--SNRWLPPPCNTWKLNTDISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYW---AIKFI

Query:  LKEVEAWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCEAWYDNFPSWLISMVNNDHF
           + A+SD   ++  I  LL  F +    H+ RNAN+VADS+ + A  L    +W++NFP  + S++ ND F
Subjt:  LKEVEAWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCEAWYDNFPSWLISMVNNDHF

XP_030939701.1 uncharacterized protein LOC115964553 [Quercus lobata]8.8e-2727.91Show/hide
Query:  YSVRSGYKVFLNYKIDGISSSS--TPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHREDFRGSFIDRWLKIIGCSSMAEMGLVAVTMWSIWND
        YSV+SGY+   +  +    SSS   P+ ++W+KLW ++VPNK+KH LW+     LP ++NL+ R+    +  +  LK        E  L+ V +W++W  
Subjt:  YSVRSGYKVFLNYKIDGISSSS--TPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHREDFRGSFIDRWLKIIGCSSMAEMGLVAVTMWSIWND

Query:  RNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSSQQTRPSLSNRWLPPPCNTWKLNTDISRVSSPSLIGAGLIIRD
        RN +   +P    N                  K+  H   S  QR  S +    +++S   +P+   RW PPP + +KLN D +  ++    G G+++R+
Subjt:  RNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSSQQTRPSLSNRWLPPPCNTWKLNTDISRVSSPSLIGAGLIIRD

Query:  WDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYWAIKFILKEVEAWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVR
         DG + A+ +  + L  +    ET A    L++AL LG+ ++I+E DS    K +  E   ++    ++  I  L    +      + R  N +A S+ R
Subjt:  WDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYWAIKFILKEVEAWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVR

Query:  KARVLRMCEAWYDNFPSWLISMVNND
        K++ L     W +N P  L+S++  D
Subjt:  KARVLRMCEAWYDNFPSWLISMVNND

TrEMBL top hitse value%identityAlignment
A0A5C7H0P0 Uncharacterized protein3.0e-2827.32Show/hide
Query:  YSVRSGYKVFLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHRE----DF-----------------RGSFIDRWLKIIGC
        Y+VRSGYKV L+ K  GI SSS  ++  W+ LWK N+PNK K F WK  NG+LP  + L  R     D+                   S ++ W +++G 
Subjt:  YSVRSGYKVFLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHRE----DF-----------------RGSFIDRWLKIIGC

Query:  SSMAEM---------------------GLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSSQQ
          +  +                      L+ +  W +W +RN +++      A     WI ++  EF  AN+     V+  SHQ                
Subjt:  SSMAEM---------------------GLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSSQQ

Query:  TRPSLSNRWLPPPCNTWKLNTDISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYWAIKFILKEVE
          PS    W  P    +K+N D S        G G+IIRD+ G+  AA S  V    +  + E  A LEG+  A+ +G S +I+ESD+   I+ +  +  
Subjt:  TRPSLSNRWLPPPCNTWKLNTDISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYWAIKFILKEVE

Query:  AWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCEAWYDNFPSWLISMVNND
          +++ +++ +  +L  S N + ++ + R AN+VA  I + A  L     W++  P  +  +V  D
Subjt:  AWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCEAWYDNFPSWLISMVNND

A0A6J1DX30 uncharacterized protein LOC1110248743.1e-3328.65Show/hide
Query:  NYSVRSGYKVFLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHR-------------------------------------
        NYSVRSGYK++++ K +  S+S+      W  +WK+ VP KIK F+W+  +  +P   NL+ R                                     
Subjt:  NYSVRSGYKVFLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHR-------------------------------------

Query:  ------EDFRGSFIDRWLKIIGCSSMAEMGLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSS
               +   SF++ W  +       ++ L A+T W IWNDRN +I+ + +     +  W++ +          +DSH         S   M   +  +
Subjt:  ------EDFRGSFIDRWLKIIGCSSMAEMGLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSS

Query:  QQTRPSLSNRWLPPPCNTWKLNTDIS-RVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYWAIKFILK
        Q     +   W P    + KLNTD + R +S S    G IIRD   ++ AA+S+ V    +  LAE   ILEGLK+A +  ++ L VESDS  AI+ I  
Subjt:  QQTRPSLSNRWLPPPCNTWKLNTDIS-RVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYWAIKFILK

Query:  EVEAWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCE-AWYDNFPSWLISMVNND
        E+    D ++ +  I +L   F  I F H SR  N  A  + +          AW  NFP+WL+ +V  D
Subjt:  EVEAWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCE-AWYDNFPSWLISMVNND

A0A803NM27 Uncharacterized protein3.0e-2825.41Show/hide
Query:  YSVRSGYKVFLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHREDFRGS----FIDRW-----------------------
        Y V+SGY V      +   S S+P    W+  W++ +P K+K F WK I+  LP  S L  R+    +     ++ W                       
Subjt:  YSVRSGYKVFLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHREDFRGS----FIDRW-----------------------

Query:  ---------------LKIIGCSSMAEMGLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSSQQ
                        +I  C + +E+ ++  TMWSIW+DRN +++ +     ++ S   +S++  F  A Q++  H                 A  +  
Subjt:  ---------------LKIIGCSSMAEMGLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSSQQ

Query:  TRPSLSNRWLPPPCNTWKLNTDISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYWAIKFILKEVE
          P+    W PPP N  KLN D +   +   IG G IIRD  GN++AA S  +D        E   +   LKWA  L +   +VE+DS   +  + K   
Subjt:  TRPSLSNRWLPPPCNTWKLNTDISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYWAIKFILKEVE

Query:  AWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCEAWYDNFPSWLISMVNND
          S  + ++F + + L    ++   H+ R+ N  A  + + A VL     W ++FPS ++S++  D
Subjt:  AWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCEAWYDNFPSWLISMVNND

A0A803P0J9 Uncharacterized protein1.6e-2927.98Show/hide
Query:  YSVRSGYKVFLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHREDFRGSFI----------DRWLKIIGCSSMAEMGLVAV
        Y+V+SGY +  + +     S ST  +  WQ  W +N+P K+K F W++I+  LP   NL+  E    SF           D  + +    S AEM L+  
Subjt:  YSVRSGYKVFLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHREDFRGSFI----------DRWLKIIGCSSMAEMGLVAV

Query:  TMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSSQQTRPSLSNR--WLPPPCNTWKLNTDISRVSSPS
        T+W IW +RN++++          + + S Y+  +  A QK                  +   + +  T P++  +  W+PP   ++KLN D +     +
Subjt:  TMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSSQQTRPSLSNR--WLPPPCNTWKLNTDISRVSSPS

Query:  LIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYWAIKFILKEVEAWSDVESMLFSIWSLLPSFNSIHFIHISRN
        +IG G I+RD  GN+ AA S  +  NFA+H  E  A+  GL W L +      +E+D+      I     A++  + ++  I SLL  F      H+ R+
Subjt:  LIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYWAIKFILKEVEAWSDVESMLFSIWSLLPSFNSIHFIHISRN

Query:  ANAVADSIVRKARVLRMCEAWYDNFPSWLISMVNND
        AN  A  + + A  L     W ++ P  + S+V ND
Subjt:  ANAVADSIVRKARVLRMCEAWYDNFPSWLISMVNND

A0A803P623 Uncharacterized protein2.9e-3128.95Show/hide
Query:  YSVRSGYKVFLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHRE-------------------------------------
        Y+V+SGY +  +      SSSS+  ++ W+  W + +P KIK F W+VI+  LP  ++LV R+                                     
Subjt:  YSVRSGYKVFLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHRE-------------------------------------

Query:  -DFR---GSFIDRWLKIIGCS-SMAEMGLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSSQQ
         D++     +   +LK +  S + AE   +  T+W IW++RN++++++    A+  + +   Y++ +                 R + L     A+SSQ 
Subjt:  -DFR---GSFIDRWLKIIGCS-SMAEMGLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSSQQ

Query:  TRPSL--SNRWLPPPCNTWKLNTDISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYW---AIKFI
          PS   S  W PPP  T KLN D +   + S IG G +IR++ G + AA S+ +  NFA+H  E  A+  G+ W L    S  IVE+D+     A+K  
Subjt:  TRPSL--SNRWLPPPCNTWKLNTDISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYW---AIKFI

Query:  LKEVEAWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCEAWYDNFPSWLISMVNNDHF
           + A+SD   ++  I  LL  F +    H+ RNAN+VADS+ + A  L    +W++NFP  + S++ ND F
Subjt:  LKEVEAWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCEAWYDNFPSWLISMVNNDHF

SwissProt top hitse value%identityAlignment
P0C2F6 Putative ribonuclease H protein At1g657505.6e-0821.56Show/hide
Query:  YSVRSGYKVFLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHREDFRGSFIDR----------------------WLKII-
        +SVRS Y++     +D +   +  +   +  LWK+ VP ++K FLW V N  +       HR     S + +                      W++++ 
Subjt:  YSVRSGYKVFLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHREDFRGSFIDR----------------------WLKII-

Query:  ------------------------GCSSMAEMGLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGA
                                GC  +    + AV +W  W  R   I  E     N + R    +V+E+            +    R  S N++ G 
Subjt:  ------------------------GCSSMAEMGLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGA

Query:  SSSQQTRPSLSNRWLPPPCNTWKLNTDISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYWAIKFI
        +   Q R      W+ P     K+NTD +   +P L  AG ++RD  G      SL +    A   AE W +  GL +A      R+ +E DS   + F+
Subjt:  SSSQQTRPSLSNRWLPPPCNTWKLNTDISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYWAIKFI

Query:  LKEVEAWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCEAWYDNFPSWLISMVNND
           +     +  ++      L     +  +H+ R AN +AD +   A  L +    +D  P  + S++  D
Subjt:  LKEVEAWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCEAWYDNFPSWLISMVNND

Arabidopsis top hitse value%identityAlignment
AT2G02650.1 Ribonuclease H-like superfamily protein4.5e-1323.24Show/hide
Query:  VRSGYKVFLNYKIDGISSSSTP--VTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNL--------------------VHREDFR--------------
        +RSGY V  +  +    +   P   TEV Q +WK++V  KIKHFLW+ + G L   + L                    +H   F               
Subjt:  VRSGYKVFLNYKIDGISSSSTP--VTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNL--------------------VHREDFR--------------

Query:  --------GSFIDRWLKIIGCS-----SMAEMGLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGA
                 SF D   ++I  S     +  +  L    MW +W  RN  +  +     +  +R       E+L AN+  ++               V  A
Subjt:  --------GSFIDRWLKIIGCS-----SMAEMGLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGA

Query:  SSSQQTRPSLSNRWLPPPCNTWKLNTDISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLK--WALSLGYSRLIVESDSYWAIK
        ++  QT    S++W PPP    K N D           +G  IR+ +G+I    +  +  +  +  AE    L  L+  WA  L Y  +  ESDS  ++ 
Subjt:  SSSQQTRPSLSNRWLPPPCNTWKLNTDISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLK--WALSLGYSRLIVESDSYWAIK

Query:  FILKEVEAWSDVESMLFSI--WSLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCEAWYDNFPSWLIS
         ++   E  S + ++++ I  W L   + S+ F  ++R  N+ AD++             Y   PSWL++
Subjt:  FILKEVEAWSDVESMLFSI--WSLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCEAWYDNFPSWLIS

AT3G25270.1 Ribonuclease H-like superfamily protein3.0e-0920.4Show/hide
Query:  EVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHR---------------EDFRGSFID---------------RWLKIIGCSSMAEMGLVAVT-----
        E+  K+WK+    KIKHFLWK+++G L    NL  R               E  +  F D               + L+  G +   +M L+  +     
Subjt:  EVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHR---------------EDFRGSFID---------------RWLKIIGCSSMAEMGLVAVT-----

Query:  -----------MWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSSQQTRPSLS-NRWLPPPCNTWKLNT
                   +W +W  RN+++  +         +   + V+E+   N  + S              + Q   SS+  +P+++  +W  PP    K N 
Subjt:  -----------MWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSSQQTRPSLS-NRWLPPPCNTWKLNT

Query:  DISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYWAIKFILKEVEAWSDVESMLFSIWSLL-----
        D +         AG ++RD +G    +          +  +E  A++  ++ A S GY ++I E DS        K+VE   + E + F  ++ +     
Subjt:  DISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWALSLGYSRLIVESDSYWAIKFILKEVEAWSDVESMLFSIWSLL-----

Query:  --PSFNSIHFIHISRNANAVADSIVRKARVLRMCEAWYDNFPSWLISMVNNDH
            F    F  + R  N  AD + +          ++   P+++ S +  DH
Subjt:  --PSFNSIHFIHISRNANAVADSIVRKARVLRMCEAWYDNFPSWLISMVNNDH

AT4G29090.1 Ribonuclease H-like superfamily protein2.0e-1623.28Show/hide
Query:  NYSVRSGYKV---FLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHRE---------------------------------
        +Y+V+SGY V    +N +      S   +  ++QK+WK     KI+HFLWK ++  LP    L +R                                  
Subjt:  NYSVRSGYKV---FLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHRE---------------------------------

Query:  -----DFRGSFIDR------WLKIIGCSS---MAEMGLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNM
                G + D       W+  +G  +        LV   +W +W +RN+++          R R  ++  E   +A   ++   I +          
Subjt:  -----DFRGSFIDR------WLKIIGCSS---MAEMGLVAVTMWSIWNDRNKIINNEPIPDANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNM

Query:  VQGASSSQQTRPSLSNRWLPPPCNTWKLNTDISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWA-LSLG---YSRLIVESD
         +   +  Q   S   RW PPP    K NTD +        G G ++R+  G ++   +  +    +   AE    LE ++WA LSL    Y+ +I ESD
Subjt:  VQGASSSQQTRPSLSNRWLPPPCNTWKLNTDISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHLAETWAILEGLKWA-LSLG---YSRLIVESD

Query:  SYWAIKFILKEVEAWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVRKA-RVLRMCEAWYDNFPSWLISMVN
        S   I+ IL   E W  ++  +  +  LL  F  + F+ I R  N +A+ + R++   L      Y   PSW  S ++
Subjt:  SYWAIKFILKEVEAWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVRKA-RVLRMCEAWYDNFPSWLISMVN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
AACTATTCTGTTAGAAGTGGTTATAAAGTCTTCCTGAATTATAAAATTGATGGGATCTCATCTAGTTCGACTCCTGTGACTGAGGTTTGGCAAAAGCTGTGGAAAATAAA
TGTTCCTAACAAGATAAAACATTTTCTATGGAAAGTGATTAATGGTTTCCTCCCTAATAGATCTAACCTAGTTCATAGGGAAGATTTTAGAGGCAGCTTCATTGATAGAT
GGCTCAAGATCATCGGCTGTTCGTCGATGGCGGAGATGGGGTTGGTCGCAGTCACAATGTGGTCAATCTGGAATGACAGGAATAAAATCATTAATAACGAGCCTATCCCT
GATGCAAATATTAGAAGCCGGTGGATCTCGAGTTACGTGGAGGAGTTCTTGAAGGCTAATCAAAAGATCGATTCCCATGTGATTTCATCTTCCCACCAGAGGCGATCTTC
GCTGAATATGGTGCAAGGAGCCTCCTCTTCTCAGCAGACCAGACCTTCTTTGAGTAATCGGTGGTTGCCTCCTCCATGCAATACTTGGAAGTTGAATACGGACATTTCTA
GGGTTTCGTCTCCATCTTTAATTGGTGCTGGTTTGATTATTCGAGATTGGGATGGAAATATCAGAGCTGCATCAAGTCTTTTTGTGGATCTCAATTTTGCGACTCACTTG
GCTGAGACTTGGGCCATATTGGAAGGCTTGAAGTGGGCCTTATCCCTAGGATATTCAAGGCTTATTGTGGAGTCAGATAGTTATTGGGCCATTAAATTCATCTTGAAAGA
AGTTGAGGCTTGGTCAGATGTCGAATCCATGTTGTTCTCAATCTGGAGCCTTTTGCCTTCTTTTAATAGCATCCACTTTATTCATATTTCTAGAAATGCTAATGCAGTGG
CAGACTCTATAGTTAGGAAAGCTAGGGTCCTAAGAATGTGTGAGGCTTGGTATGATAATTTTCCAAGCTGGTTGATTTCTATGGTCAATAATGACCATTTTGTGTATGCC
CCAGTGGCAGTTTAG
mRNA sequenceShow/hide mRNA sequence
AACTATTCTGTTAGAAGTGGTTATAAAGTCTTCCTGAATTATAAAATTGATGGGATCTCATCTAGTTCGACTCCTGTGACTGAGGTTTGGCAAAAGCTGTGGAAAATAAA
TGTTCCTAACAAGATAAAACATTTTCTATGGAAAGTGATTAATGGTTTCCTCCCTAATAGATCTAACCTAGTTCATAGGGAAGATTTTAGAGGCAGCTTCATTGATAGAT
GGCTCAAGATCATCGGCTGTTCGTCGATGGCGGAGATGGGGTTGGTCGCAGTCACAATGTGGTCAATCTGGAATGACAGGAATAAAATCATTAATAACGAGCCTATCCCT
GATGCAAATATTAGAAGCCGGTGGATCTCGAGTTACGTGGAGGAGTTCTTGAAGGCTAATCAAAAGATCGATTCCCATGTGATTTCATCTTCCCACCAGAGGCGATCTTC
GCTGAATATGGTGCAAGGAGCCTCCTCTTCTCAGCAGACCAGACCTTCTTTGAGTAATCGGTGGTTGCCTCCTCCATGCAATACTTGGAAGTTGAATACGGACATTTCTA
GGGTTTCGTCTCCATCTTTAATTGGTGCTGGTTTGATTATTCGAGATTGGGATGGAAATATCAGAGCTGCATCAAGTCTTTTTGTGGATCTCAATTTTGCGACTCACTTG
GCTGAGACTTGGGCCATATTGGAAGGCTTGAAGTGGGCCTTATCCCTAGGATATTCAAGGCTTATTGTGGAGTCAGATAGTTATTGGGCCATTAAATTCATCTTGAAAGA
AGTTGAGGCTTGGTCAGATGTCGAATCCATGTTGTTCTCAATCTGGAGCCTTTTGCCTTCTTTTAATAGCATCCACTTTATTCATATTTCTAGAAATGCTAATGCAGTGG
CAGACTCTATAGTTAGGAAAGCTAGGGTCCTAAGAATGTGTGAGGCTTGGTATGATAATTTTCCAAGCTGGTTGATTTCTATGGTCAATAATGACCATTTTGTGTATGCC
CCAGTGGCAGTTTAG
Protein sequenceShow/hide protein sequence
NYSVRSGYKVFLNYKIDGISSSSTPVTEVWQKLWKINVPNKIKHFLWKVINGFLPNRSNLVHREDFRGSFIDRWLKIIGCSSMAEMGLVAVTMWSIWNDRNKIINNEPIP
DANIRSRWISSYVEEFLKANQKIDSHVISSSHQRRSSLNMVQGASSSQQTRPSLSNRWLPPPCNTWKLNTDISRVSSPSLIGAGLIIRDWDGNIRAASSLFVDLNFATHL
AETWAILEGLKWALSLGYSRLIVESDSYWAIKFILKEVEAWSDVESMLFSIWSLLPSFNSIHFIHISRNANAVADSIVRKARVLRMCEAWYDNFPSWLISMVNNDHFVYA
PVAV