; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006470 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006470
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold2:48402072..48403710
RNA-Seq ExpressionSpg006470
SyntenySpg006470
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8695166.1 hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]5.2e-0732.65Show/hide
Query:  FINNLARAKYIEMLKRDFLFERGF------GDDLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAVNSLFNLQ
        F++  A+  Y  +  R   FE GF        +L   +   +  H W +F   P PVN+ IV+EFY+NI +      +VRG+ + ++P A+N  F LQ
Subjt:  FINNLARAKYIEMLKRDFLFERGF------GDDLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAVNSLFNLQ

PON42276.1 hypothetical protein PanWU01x14_283280 [Parasponia andersonii]5.2e-0735.45Show/hide
Query:  ARAKYIEMLK-RDFLFERGF-GD-----DLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAVNSLFNLQD--YPH
        A  +Y E ++ R    E+GF GD     + P F+   I  H W  FC+ PE + + +VREFYAN+ + +     VRGV V  S  A+N+++ L D    H
Subjt:  ARAKYIEMLK-RDFLFERGF-GD-----DLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAVNSLFNLQD--YPH

Query:  AGFNEMVVAP
        + F E +  P
Subjt:  AGFNEMVVAP

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.0e-0747.62Show/hide
Query:  FLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAVNSLFNLQD
        F+   I  H W QFC+ PE     +VREFYAN+ D E     VRGV V WS  A+N++F L D
Subjt:  FLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAVNSLFNLQD

PON90635.1 hypothetical protein TorRG33x02_134920 [Trema orientale]1.0e-0738.05Show/hide
Query:  RFINNLARAKYIEMLKRDFL-FERGFGDD------LPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAVNSLFNLQ
        +F +  A A+Y E +K   L  E+GF  +       P F+   I  H W  FC+  E     +VREFYAN+ D E     V+GV V WS  A+N+LF L 
Subjt:  RFINNLARAKYIEMLKRDFL-FERGFGDD------LPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAVNSLFNLQ

Query:  D--YPHAGFNEMV
        D    H+ F E V
Subjt:  D--YPHAGFNEMV

RYE21173.1 hypothetical protein EOP45_09925 [Sphingobacteriaceae bacterium]6.1e-0828.87Show/hide
Query:  FINNLARAKYIEMLKRDFLFERGF----GDDLPRFLRTGIANHGWSQFCSKPE-PVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAVNSLFNLQD--
        F +  A  +Y  +++R  +FERG        +   +   I    W +FC+ PE   N  ++ EFYAN+ D E     VRGV VD S GA+N+L    D  
Subjt:  FINNLARAKYIEMLKRDFLFERGF----GDDLPRFLRTGIANHGWSQFCSKPE-PVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAVNSLFNLQD--

Query:  YPHAGFNEMVVAPSNDQLNAIVRERAGVPINDGDVTLLDKGI
        + + G+ + +  P+ D++ +++          G+  ++DKG+
Subjt:  YPHAGFNEMVVAPSNDQLNAIVRERAGVPINDGDVTLLDKGI

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)1.5e-0747.62Show/hide
Query:  FLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAVNSLFNLQD
        F+   I  H W QFC+ PE     +VREFYAN+ D E     VRGV V WS  A+N++F L D
Subjt:  FLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAVNSLFNLQD

A0A2P5BCG4 Uncharacterized protein (Fragment)1.6e-0137.18Show/hide
Query:  QEQLQLH-SSRMEFAERQFQTFWNYVKRRDATLKGAFQSNFSKPYRAFPIFPDDLLNPWIPPPPVEREGDDEEDPGQE
        QE  Q H  S ++   +Q Q FW Y K RD  LK A Q+NF++P   FP FP ++L         E E + ++D   E
Subjt:  QEQLQLH-SSRMEFAERQFQTFWNYVKRRDATLKGAFQSNFSKPYRAFPIFPDDLLNPWIPPPPVEREGDDEEDPGQE

A0A2P5BCG4 Uncharacterized protein (Fragment)2.5e-0735.45Show/hide
Query:  ARAKYIEMLK-RDFLFERGF-GD-----DLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAVNSLFNLQD--YPH
        A  +Y E ++ R    E+GF GD     + P F+   I  H W  FC+ PE + + +VREFYAN+ + +     VRGV V  S  A+N+++ L D    H
Subjt:  ARAKYIEMLK-RDFLFERGF-GD-----DLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAVNSLFNLQD--YPH

Query:  AGFNEMVVAP
        + F E +  P
Subjt:  AGFNEMVVAP

A0A2P5EYL5 Uncharacterized protein5.1e-0838.05Show/hide
Query:  RFINNLARAKYIEMLKRDFL-FERGFGDD------LPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAVNSLFNLQ
        +F +  A A+Y E +K   L  E+GF  +       P F+   I  H W  FC+  E     +VREFYAN+ D E     V+GV V WS  A+N+LF L 
Subjt:  RFINNLARAKYIEMLKRDFL-FERGFGDD------LPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAVNSLFNLQ

Query:  D--YPHAGFNEMV
        D    H+ F E V
Subjt:  D--YPHAGFNEMV

A0A4Q3ENY7 Uncharacterized protein3.0e-0828.87Show/hide
Query:  FINNLARAKYIEMLKRDFLFERGF----GDDLPRFLRTGIANHGWSQFCSKPE-PVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAVNSLFNLQD--
        F +  A  +Y  +++R  +FERG        +   +   I    W +FC+ PE   N  ++ EFYAN+ D E     VRGV VD S GA+N+L    D  
Subjt:  FINNLARAKYIEMLKRDFLFERGF----GDDLPRFLRTGIANHGWSQFCSKPE-PVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAVNSLFNLQD--

Query:  YPHAGFNEMVVAPSNDQLNAIVRERAGVPINDGDVTLLDKGI
        + + G+ + +  P+ D++ +++          G+  ++DKG+
Subjt:  YPHAGFNEMVVAPSNDQLNAIVRERAGVPINDGDVTLLDKGI

A0A6A2ZUE4 Uncharacterized protein2.5e-0732.65Show/hide
Query:  FINNLARAKYIEMLKRDFLFERGF------GDDLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAVNSLFNLQ
        F++  A+  Y  +  R   FE GF        +L   +   +  H W +F   P PVN+ IV+EFY+NI +      +VRG+ + ++P A+N  F LQ
Subjt:  FINNLARAKYIEMLKRDFLFERGF------GDDLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWSPGAVNSLFNLQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAAAACGATAGCAAGAAAAGAGAGAGATAATGAGGAAGAAGAGGTACCTGTTACCCCCGAAGTACAGAAAGTGAAAACGAAGAAAAAGAAAACGCCGGAGGAAAA
AGAAGCCAAAAGAAGGAGAAGGCAACAAAGGGCTGAGGATCAAGAAGTTATACAGAAAGTAGTGGAAGATGTTACTGCCACAGTGGTTGAAGAAGATCCGAAAGAACCAG
AAGGACAGAATCCAGAGCAGACTGAGCCGAGAGTTGCGGATACAGTGGCTCGAGTGGAGGTAATCATGCCGGAAGTACCAAAATGTCGCCGCGTGAAGCGAAAAGCTGGT
CGCGTCAAGGAAAACAGGGGCAAAGGTATTGTTGAAGCATCAGTTGAAGCTGACAAGACTGAGGAGCCACGATTGCCATACAACCGCTTCATCAATAATCTTGCTCGGGC
AAAATACATAGAAATGCTGAAACGGGACTTTCTGTTCGAACGGGGTTTTGGCGATGATCTGCCACGGTTCTTGAGGACTGGAATAGCGAACCATGGCTGGAGTCAGTTCT
GTTCGAAGCCGGAGCCGGTCAATTCCAACATTGTTCGAGAATTTTATGCAAATATTGACGATCAAGAAGGATTTCAGGCTATAGTTCGAGGAGTACCCGTTGACTGGAGC
CCAGGAGCTGTAAATTCTTTATTCAACCTCCAGGACTACCCGCACGCAGGCTTCAATGAGATGGTGGTAGCGCCATCTAATGATCAGTTAAATGCGATTGTCCGAGAGAG
GGCAGGGGTTCCAATAAATGATGGTGATGTGACTTTACTAGACAAGGGAATAATCGACACGCCGAACCTGGCTAGGCTTCAAAGGACACAGGAAGCACGCCAAGGAGGTT
TGGTGTGCGGCATCCATCAACTGCAGGAGCAATTACAGCTGCATTCCAGTAGGATGGAGTTTGCTGAAAGGCAATTCCAAACCTTCTGGAATTATGTGAAGAGGAGGGAT
GCCACACTGAAGGGGGCCTTCCAATCTAACTTTTCAAAACCGTATCGGGCCTTCCCGATATTCCCTGATGACCTGTTGAATCCATGGATCCCGCCGCCGCCTGTTGAGAG
AGAAGGAGATGATGAAGAAGATCCTGGTCAGGAGGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAAAACGATAGCAAGAAAAGAGAGAGATAATGAGGAAGAAGAGGTACCTGTTACCCCCGAAGTACAGAAAGTGAAAACGAAGAAAAAGAAAACGCCGGAGGAAAA
AGAAGCCAAAAGAAGGAGAAGGCAACAAAGGGCTGAGGATCAAGAAGTTATACAGAAAGTAGTGGAAGATGTTACTGCCACAGTGGTTGAAGAAGATCCGAAAGAACCAG
AAGGACAGAATCCAGAGCAGACTGAGCCGAGAGTTGCGGATACAGTGGCTCGAGTGGAGGTAATCATGCCGGAAGTACCAAAATGTCGCCGCGTGAAGCGAAAAGCTGGT
CGCGTCAAGGAAAACAGGGGCAAAGGTATTGTTGAAGCATCAGTTGAAGCTGACAAGACTGAGGAGCCACGATTGCCATACAACCGCTTCATCAATAATCTTGCTCGGGC
AAAATACATAGAAATGCTGAAACGGGACTTTCTGTTCGAACGGGGTTTTGGCGATGATCTGCCACGGTTCTTGAGGACTGGAATAGCGAACCATGGCTGGAGTCAGTTCT
GTTCGAAGCCGGAGCCGGTCAATTCCAACATTGTTCGAGAATTTTATGCAAATATTGACGATCAAGAAGGATTTCAGGCTATAGTTCGAGGAGTACCCGTTGACTGGAGC
CCAGGAGCTGTAAATTCTTTATTCAACCTCCAGGACTACCCGCACGCAGGCTTCAATGAGATGGTGGTAGCGCCATCTAATGATCAGTTAAATGCGATTGTCCGAGAGAG
GGCAGGGGTTCCAATAAATGATGGTGATGTGACTTTACTAGACAAGGGAATAATCGACACGCCGAACCTGGCTAGGCTTCAAAGGACACAGGAAGCACGCCAAGGAGGTT
TGGTGTGCGGCATCCATCAACTGCAGGAGCAATTACAGCTGCATTCCAGTAGGATGGAGTTTGCTGAAAGGCAATTCCAAACCTTCTGGAATTATGTGAAGAGGAGGGAT
GCCACACTGAAGGGGGCCTTCCAATCTAACTTTTCAAAACCGTATCGGGCCTTCCCGATATTCCCTGATGACCTGTTGAATCCATGGATCCCGCCGCCGCCTGTTGAGAG
AGAAGGAGATGATGAAGAAGATCCTGGTCAGGAGGATTGA
Protein sequenceShow/hide protein sequence
MAKTIARKERDNEEEEVPVTPEVQKVKTKKKKTPEEKEAKRRRRQQRAEDQEVIQKVVEDVTATVVEEDPKEPEGQNPEQTEPRVADTVARVEVIMPEVPKCRRVKRKAG
RVKENRGKGIVEASVEADKTEEPRLPYNRFINNLARAKYIEMLKRDFLFERGFGDDLPRFLRTGIANHGWSQFCSKPEPVNSNIVREFYANIDDQEGFQAIVRGVPVDWS
PGAVNSLFNLQDYPHAGFNEMVVAPSNDQLNAIVRERAGVPINDGDVTLLDKGIIDTPNLARLQRTQEARQGGLVCGIHQLQEQLQLHSSRMEFAERQFQTFWNYVKRRD
ATLKGAFQSNFSKPYRAFPIFPDDLLNPWIPPPPVEREGDDEEDPGQED