; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006543 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006543
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description40S ribosomal protein SA
Genome locationscaffold9:18333771..18336452
RNA-Seq ExpressionSpg006543
SyntenySpg006543
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001865 - Ribosomal protein S2
IPR005707 - Ribosomal protein S2, eukaryotic/archaeal
IPR018130 - Ribosomal protein S2, conserved site
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily
IPR027498 - Ribosomal protein S2, eukaryotic


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607580.1 40S ribosomal protein SA, partial [Cucurbita argyrosperma subsp. sororia]3.9e-15490.48Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAAD-VVPAAA-----PPASSVEWTQETVALAADGWDAAAPPAPAPAP
        MVDLFFYREPEEAKE+EEEEALPPPDFGIADYGAAPLVAS+QWSAQIPDAQWGAAD VVPAAA     PP SSVEWT E  ALAADGWDAA  P      
Subjt:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAAD-VVPAAA-----PPASSVEWTQETVALAADGWDAAAPPAPAPAP

Query:  APAPAPAVDGAPAAS
         P  APAVDGA   S
Subjt:  APAPAPAVDGAPAAS

XP_022932088.1 40S ribosomal protein SA-like [Cucurbita moschata]3.0e-15490.76Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAAD-VVPAAA----PPASSVEWTQETVALAADGWDAAAPPAPAPAPA
        MVDLFFYREPEEAKE+EEEEALPPPDFGIADYGAAPLVAS+QWSAQIPDAQWGAAD VVPAAA    PP SSVEWT E  ALAADGWDAA  P       
Subjt:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAAD-VVPAAA----PPASSVEWTQETVALAADGWDAAAPPAPAPAPA

Query:  PAPAPAVDGAPAAS
        P  APAVDGA   S
Subjt:  PAPAPAVDGAPAAS

XP_022972886.1 40S ribosomal protein SA-like [Cucurbita maxima]5.1e-15490.13Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAADVV-----PAAAPPASSVEWTQETVALAADGWDAAAPPAPAPAPA
        MVDLFFYREPEEAKE+EEEEALPPPDFGIADYGAAPLVAS+QWSAQIPDAQWGAADVV      AA PP SSVEWT E  ALAADGWDAA  P       
Subjt:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAADVV-----PAAAPPASSVEWTQETVALAADGWDAAAPPAPAPAPA

Query:  PAPAPAVDGAPAAS
        P  APAVDGA   S
Subjt:  PAPAPAVDGAPAAS

XP_023525392.1 40S ribosomal protein SA-like [Cucurbita pepo subsp. pepo]8.8e-15489.62Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAAD-VVPAAA--------PPASSVEWTQETVALAADGWDAAAPPAPA
        MVDLFFYREPEEAKE+EEEEALPPPDFGIADYGAAPLVAS+QWSAQIPDAQWGAAD VVPAAA        PP SSVEWT E  ALAADGWDAA  P   
Subjt:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAAD-VVPAAA--------PPASSVEWTQETVALAADGWDAAAPPAPA

Query:  PAPAPAPAPAVDGAPAAS
            P  APAVDGA   S
Subjt:  PAPAPAPAPAVDGAPAAS

XP_038886558.1 40S ribosomal protein SA-like [Benincasa hispida]5.0e-15791.35Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPRQL+QKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQHTGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAADVVPAAA-PPASSVEWTQETVALAADGWDAAAPPAPAPAPAPAPA
        MVDLFFYREPEEAKE EEEEALPPPDFGIADYGAAPLV ++QW+AQIPDAQWGA D VPAAA PPAS+VEW QE VALAADGWDAA PP PA   A A A
Subjt:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAADVVPAAA-PPASSVEWTQETVALAADGWDAAAPPAPAPAPAPAPA

Query:  PAVDGAPAASWF
        P      +ASWF
Subjt:  PAVDGAPAASWF

TrEMBL top hitse value%identityAlignment
A0A1S3CJX7 40S ribosomal protein SA3.0e-15289.46Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQHTGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAADVV--PAAAPPASSVEWTQETVALAADGWDAAAPPAPAPAPAPAP
        MVDLFFYREPEEAKE EEEEALPP DFGIADY AAPL AS+QW++QIPDAQWGAAD +  PAA  PAS  EW  E VAL ADGWDAAAPP P  A A   
Subjt:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAADVV--PAAAPPASSVEWTQETVALAADGWDAAAPPAPAPAPAPAP

Query:  APAVDGAPAASWF
        APA     +ASWF
Subjt:  APAVDGAPAASWF

A0A5D3DUK0 40S ribosomal protein SA3.0e-15289.46Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQHTGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAADVV--PAAAPPASSVEWTQETVALAADGWDAAAPPAPAPAPAPAP
        MVDLFFYREPEEAKE EEEEALPP DFGIADY AAPL AS+QW++QIPDAQWGAAD +  PAA  PAS  EW  E VAL ADGWDAAAPP P  A A   
Subjt:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAADVV--PAAAPPASSVEWTQETVALAADGWDAAAPPAPAPAPAPAP

Query:  APAVDGAPAASWF
        APA     +ASWF
Subjt:  APAVDGAPAASWF

A0A6J1DWT5 40S ribosomal protein SA3.0e-15289.21Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKN DFQMERY+FKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAAD-VVPAAAPPASSVEWTQETVAL-AADGWDAAAPPAPAPAPAPAP
        MVDLFFYREPEEAKEQEEEEA  PPD+GIAD+GAAPLVAS+QW+ QIPDAQWGA D VVPAAA P SSVEW QE  A  AADGWDA           P P
Subjt:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAAD-VVPAAAPPASSVEWTQETVAL-AADGWDAAAPPAPAPAPAPAP

Query:  APAVDGA--PAASWF
        APAVD A  PAASWF
Subjt:  APAVDGA--PAASWF

A0A6J1F0N2 40S ribosomal protein SA1.5e-15490.76Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAAD-VVPAAA----PPASSVEWTQETVALAADGWDAAAPPAPAPAPA
        MVDLFFYREPEEAKE+EEEEALPPPDFGIADYGAAPLVAS+QWSAQIPDAQWGAAD VVPAAA    PP SSVEWT E  ALAADGWDAA  P       
Subjt:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAAD-VVPAAA----PPASSVEWTQETVALAADGWDAAAPPAPAPAPA

Query:  PAPAPAVDGAPAAS
        P  APAVDGA   S
Subjt:  PAPAPAVDGAPAAS

A0A6J1I769 40S ribosomal protein SA2.5e-15490.13Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAADVV-----PAAAPPASSVEWTQETVALAADGWDAAAPPAPAPAPA
        MVDLFFYREPEEAKE+EEEEALPPPDFGIADYGAAPLVAS+QWSAQIPDAQWGAADVV      AA PP SSVEWT E  ALAADGWDAA  P       
Subjt:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAADVV-----PAAAPPASSVEWTQETVALAADGWDAAAPPAPAPAPA

Query:  PAPAPAVDGAPAAS
        P  APAVDGA   S
Subjt:  PAPAPAVDGAPAAS

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA9.5e-12776.19Show/hide
Query:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG
        A P R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENP+DIIVQSARPYGQRAVLKFAQ+TGAHAIAG
Subjt:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL
        RHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMR TI  GHKWDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL

Query:  FFYREPEEAKEQEEEEALPPPDFGIADYGAAPL--VASEQWSAQIPDA-QWGAADVVPAAAPPASSVEW-----TQETVALAADGWDAAAPPAPAPAPAP
        FFYREPEE KEQE +E +  PD+GI DY A  L  +    W A I DA QWGA     A  P      W         V +A DGWDAAA P     P  
Subjt:  FFYREPEEAKEQEEEEALPPPDFGIADYGAAPL--VASEQWSAQIPDA-QWGAADVVPAAAPPASSVEW-----TQETVALAADGWDAAAPPAPAPAPAP

Query:  APAPAVDGA-PAASW
         P P V+G  P A W
Subjt:  APAPAVDGA-PAASW

O22518 40S ribosomal protein SA5.0e-12877.92Show/hide
Query:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG
        AAPPRQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAG
Subjt:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL
        RHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL

Query:  FFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAADVVPAAAPPASSVEWTQETVALAADG--WDAAAPPAPAPAPAPAPAPAV
        FFYREPEEAK+QEEEEA P  D+ I D+ A  + A  QW   I D  W  +D VP   P    V W     A AA G  W  A PP   P   P P   +
Subjt:  FFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAADVVPAAAPPASSVEWTQETVALAADG--WDAAAPPAPAPAPAPAPAPAV

Query:  DGAPAASW
        D    + W
Subjt:  DGAPAASW

O65751 40S ribosomal protein SA3.7e-12374.19Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MAT  AP RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+KL LAAR+IVAIEN QDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIR G KWDV
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAADVVPAAAPPASSVEWTQETVALAADGWDAAAPPAPAPAPAPAPAP
        MVDLFFYREPEEAK+ EE+E +  PD+ IAD+  + + +  QW A I D  W   D VP   P   +V W     A+A D W  A PP     P   P  
Subjt:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAADVVPAAAPPASSVEWTQETVALAADGWDAAAPPAPAPAPAPAPAP

Query:  AVDGAPAASW
         ++  PA  W
Subjt:  AVDGAPAASW

O80377 40S ribosomal protein SA4.3e-12780.13Show/hide
Query:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH
        MA+GA   R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL LAARVIV+IENPQDIIVQSARPYGQRAVLKFAQ+TGAH
Subjt:  MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAH

Query:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV
        AIAGRHTPGTFTNQLQTSF+EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRG I  GHKW+V
Subjt:  AIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDV

Query:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAADVVPA-AAPPASSVEWTQETVALAADGWD-AAAPPAPAPAPAPAP
        MVDLFFYREPEE K+QEEE+ LP  D+ +ADY AAP+  ++QW+A IPDAQWG   V PA +A PA +  WT +   +A DGWD AAAPP P       P
Subjt:  MVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAADVVPA-AAPPASSVEWTQETVALAADGWD-AAAPPAPAPAPAPAP

Query:  AP
        AP
Subjt:  AP

Q08682 40S ribosomal protein Sa-15.8e-12476.27Show/hide
Query:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGA
        MAT G+A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQ+TGA
Subjt:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQW-SAQIPDAQWGAADVVPAAAPPASSVEWTQETVALAADGWDAAAPPAPAPA
        VMVDLFFYREPEE K ++E+EA P  ++G        +V  +QW +AQIPDA W      P +A PA++  W+    A A  GW+AAAPP+ APA
Subjt:  VMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQW-SAQIPDAQWGAADVVPAAAPPASSVEWTQETVALAADGWDAAAPPAPAPA

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA4.1e-12576.27Show/hide
Query:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGA
        MAT G+A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQ+TGA
Subjt:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQW-SAQIPDAQWGAADVVPAAAPPASSVEWTQETVALAADGWDAAAPPAPAPA
        VMVDLFFYREPEE K ++E+EA P  ++G        +V  +QW +AQIPDA W      P +A PA++  W+    A A  GW+AAAPP+ APA
Subjt:  VMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQW-SAQIPDAQWGAADVVPAAAPPASSVEWTQETVALAADGWDAAAPPAPAPA

AT1G72370.2 40s ribosomal protein SA2.2e-12375.93Show/hide
Query:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGA
        MAT G+A   QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQ+TGA
Subjt:  MAT-GAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGA

Query:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD
        +AIAGRHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI AG KWD
Subjt:  HAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWD

Query:  VMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQW-SAQIPDAQWGAADVVPAAAPPASSVEWTQETVALAADGWDAAAPPAPAPA
        VMVDLFFYREPEE K ++E+EA P  ++G        +V  +QW +AQIPDA W      P +A PA++  W+      A  GW+AAAPP+ APA
Subjt:  VMVDLFFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQW-SAQIPDAQWGAADVVPAAAPPASSVEWTQETVALAADGWDAAAPPAPAPA

AT3G04770.1 40s ribosomal protein SA B3.2e-10187.44Show/hide
Query:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG
        A   RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAG
Subjt:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD
        RHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMV+
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVD

AT3G04770.2 40s ribosomal protein SA B3.5e-11674.13Show/hide
Query:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG
        A   RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+AARVIVAIENP+DIIVQSARPYGQRAVLKFAQ+TG +AIAG
Subjt:  AAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAG

Query:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL
        RHTPGTFTNQ+QTSF+EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARMVLQMRGTI A  KWDVMVDL
Subjt:  RHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDL

Query:  FFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQW-SAQIPDAQWGAADVVPAAAPPASSVEWTQETVALAADGWDAAAPPA
        FFYREPEEAK++ +EEA    D+G        +V  +QW +AQI DA W      P +A PA  V          A GW+AA+ PA
Subjt:  FFYREPEEAKEQEEEEALPPPDFGIADYGAAPLVASEQW-SAQIPDAQWGAADVVPAAAPPASSVEWTQETVALAADGWDAAAPPA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACTGGAGCTGCACCGCCGCGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTCCATCTTGGCACCAAAAACTGCGATTTTCAAAT
GGAACGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATCATTAACCTTGGAAAAACATGGGAGAAACTTCAGTTGGCTGCTAGGGTGATTGTAGCTATCGAGAACC
CTCAAGACATCATTGTTCAGTCTGCTAGACCTTATGGTCAGAGGGCTGTTTTGAAGTTTGCTCAACACACTGGTGCTCATGCAATTGCCGGGAGACACACTCCCGGAACA
TTTACCAACCAGCTTCAGACCTCATTCAATGAACCACGTCTTCTTATACTTACTGATCCTAGAACTGATCATCAGCCCATTAAGGAAGCTGCCCTTGGGAACATTCCTAC
AATAGCCTTTTGTGACACTGATTCCCCAATGCGGTATGTTGATATTGGAATCCCGGCTAACAACAAGGGGAAACATAGCATAGGGTGTCTGTTCTGGCTTTTGGCAAGGA
TGGTTCTACAAATGCGTGGAACAATTCGTGCTGGGCACAAATGGGATGTGATGGTGGATTTGTTTTTCTATCGTGAGCCTGAGGAGGCTAAGGAGCAAGAAGAGGAAGAG
GCTCTTCCGCCCCCAGATTTTGGTATTGCAGATTATGGTGCTGCTCCACTTGTTGCTTCAGAACAATGGTCTGCACAAATTCCTGATGCTCAGTGGGGTGCCGCAGATGT
GGTGCCTGCTGCTGCTCCACCTGCTTCCAGTGTCGAGTGGACTCAAGAGACAGTTGCCTTGGCAGCAGATGGATGGGATGCTGCAGCACCACCAGCACCAGCACCAGCAC
CCGCACCCGCACCCGCACCTGCTGTTGACGGTGCGCCAGCTGCCAGTTGGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGACTGGAGCTGCACCGCCGCGTCAACTCTCACAGAAGGAGGCCGACATTCAGATGATGTTGGCCGCCGAGGTCCATCTTGGCACCAAAAACTGCGATTTTCAAAT
GGAACGATACGTTTTCAAGCGCCGGAATGATGGAATCTACATCATTAACCTTGGAAAAACATGGGAGAAACTTCAGTTGGCTGCTAGGGTGATTGTAGCTATCGAGAACC
CTCAAGACATCATTGTTCAGTCTGCTAGACCTTATGGTCAGAGGGCTGTTTTGAAGTTTGCTCAACACACTGGTGCTCATGCAATTGCCGGGAGACACACTCCCGGAACA
TTTACCAACCAGCTTCAGACCTCATTCAATGAACCACGTCTTCTTATACTTACTGATCCTAGAACTGATCATCAGCCCATTAAGGAAGCTGCCCTTGGGAACATTCCTAC
AATAGCCTTTTGTGACACTGATTCCCCAATGCGGTATGTTGATATTGGAATCCCGGCTAACAACAAGGGGAAACATAGCATAGGGTGTCTGTTCTGGCTTTTGGCAAGGA
TGGTTCTACAAATGCGTGGAACAATTCGTGCTGGGCACAAATGGGATGTGATGGTGGATTTGTTTTTCTATCGTGAGCCTGAGGAGGCTAAGGAGCAAGAAGAGGAAGAG
GCTCTTCCGCCCCCAGATTTTGGTATTGCAGATTATGGTGCTGCTCCACTTGTTGCTTCAGAACAATGGTCTGCACAAATTCCTGATGCTCAGTGGGGTGCCGCAGATGT
GGTGCCTGCTGCTGCTCCACCTGCTTCCAGTGTCGAGTGGACTCAAGAGACAGTTGCCTTGGCAGCAGATGGATGGGATGCTGCAGCACCACCAGCACCAGCACCAGCAC
CCGCACCCGCACCCGCACCTGCTGTTGACGGTGCGCCAGCTGCCAGTTGGTTTTGA
Protein sequenceShow/hide protein sequence
MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGT
FTNQLQTSFNEPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEE
ALPPPDFGIADYGAAPLVASEQWSAQIPDAQWGAADVVPAAAPPASSVEWTQETVALAADGWDAAAPPAPAPAPAPAPAPAVDGAPAASWF