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Spg006545 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006545
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold9:18526541..18527964
RNA-Seq ExpressionSpg006545
SyntenySpg006545
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8707640.1 hypothetical protein F3Y22_tig00110378pilonHSYRG00039 [Hibiscus syriacus]5.1e-1625.94Show/hide
Query:  RFVNNFARAKYAELLKRDFLFERGF------------------------------SVVSEFYANVDKEDGFQVIVRGVEVDWSPSAINALYNLQNF--PH
        +F N+ A+ ++  +  R   FE GF                              S+V EFYAN+ K +   + VRG ++ ++ +AIN  ++LQ     H
Subjt:  RFVNNFARAKYAELLKRDFLFERGF------------------------------SVVSEFYANVDKEDGFQVIVRGVEVDWSPSAINALYNLQNF--PH

Query:  AAYNEMA--------------------------VAPSNEQLSDAVR------EQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKV
        A   E A                           + + E+L    +      + +L+PT+H++ VS  R+LL  +++ S  IDVG+IIV ++  C  KK 
Subjt:  AAYNEMA--------------------------VAPSNEQLSDAVR------EQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKV

Query:  GKLFFPNTITMLCSRAGVPTVPEDIILFDKGIINTPNLARLQRMQEVRQGGLVY----GVNAILEQLALSASGQEFAERQA---------LTFWNYVKNR
          L FPN IT LC +  V     D IL     I    L  L  ++  +    V+    G      +  L A  ++  + QA           F+ YVK+R
Subjt:  GKLFFPNTITMLCSRAGVPTVPEDIILFDKGIINTPNLARLQRMQEVRQGGLVY----GVNAILEQLALSASGQEFAERQA---------LTFWNYVKNR

Query:  DANLKKALQENFSKSYPALPAFPEDLLNPWIPPPSVERGEEDEENEP
        DA ++   QE         P FP+++L    P  + E   E E N P
Subjt:  DANLKKALQENFSKSYPALPAFPEDLLNPWIPPPSVERGEEDEENEP

KAE8718449.1 hypothetical protein F3Y22_tig00110013pilonHSYRG00240 [Hibiscus syriacus]8.6e-1629.45Show/hide
Query:  SVVSEFYANVDKEDGFQVIVRGVEVDWSPSAINALYNLQNF--PHAAYNEMA--------------------------VAPSNEQLSDAVR------EQR
        S+V EFYAN+ K +   + VRG ++ ++  AIN  ++LQ     HA + E A                           + + E+L    +      + +
Subjt:  SVVSEFYANVDKEDGFQVIVRGVEVDWSPSAINALYNLQNF--PHAAYNEMA--------------------------VAPSNEQLSDAVR------EQR

Query:  LLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCSRAGVPTVPEDIILFDKGIINTPNLARLQRMQEVRQGGLVY-
        L+PT+H++TVS  R+LL  +++ S  IDVG+IIV ++  C  KK   L FPN IT LC +  V     D IL     I    L  L  ++  +    V+ 
Subjt:  LLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCSRAGVPTVPEDIILFDKGIINTPNLARLQRMQEVRQGGLVY-

Query:  ------GVNAILEQLAL-SASGQEFAERQAL-----TFWNYVKNRDANLKKALQENFSKSYPALPAFPEDLLNPWIPPPSVERGEEDEENEP
                NA +  LAL  A  Q  A+  AL      F+ YVK+RD  ++   QE         P FP+++L    P  + E   E E + P
Subjt:  ------GVNAILEQLAL-SASGQEFAERQAL-----TFWNYVKNRDANLKKALQENFSKSYPALPAFPEDLLNPWIPPPSVERGEEDEENEP

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]3.9e-2432.86Show/hide
Query:  VVSEFYANVDKEDGFQVIVRGVEVDWSPSAINALYNL-----------QNFPH-----------AAYNEMAVAPS------NEQLSDAVR------EQRL
        +V EFYAN+   +   V VRGV+V WS  AINA++ L           QN              AA  E  V+           L+ A +      + RL
Subjt:  VVSEFYANVDKEDGFQVIVRGVEVDWSPSAINALYNL-----------QNFPH-----------AAYNEMAVAPS------NEQLSDAVR------EQRL

Query:  LPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCSRAGVPTVPEDIILFDKGIINTPNLARL---------QRMQEV
        LPTTH  TVS++R+LL  ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A  P +  +  L + G I+   +AR+         Q+    
Subjt:  LPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCSRAGVPTVPEDIILFDKGIINTPNLARL---------QRMQEV

Query:  R---------QGGLVYGVNAILEQLALSASGQ-------EFAERQALTFWNYVKNRDANLKKALQENFSKSYPALPAFPEDLL
        R          G ++  + A+ ++L+     Q       +   +Q   FW Y K RD  LKKALQ NF++  P  PAFP+++L
Subjt:  R---------QGGLVYGVNAILEQLALSASGQ-------EFAERQALTFWNYVKNRDANLKKALQENFSKSYPALPAFPEDLL

PON59596.1 hypothetical protein PanWU01x14_158080 [Parasponia andersonii]4.9e-1933.18Show/hide
Query:  NLQNFPHAAYNEMAVAPSNEQLSDAVREQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCSRAGVPTVPEDI
        N+QN P  A  + A+ P+ +     ++  RLLPTTH  TVS++R+LL +++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A  P +  + 
Subjt:  NLQNFPHAAYNEMAVAPSNEQLSDAVREQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCSRAGVPTVPEDI

Query:  ILFDKGIINTPNLARLQRMQEVR------------------QGGLVYGVNAILEQLALSASGQ-------EFAERQALTFWNYVKNRDANLKKALQENFS
         L   G I+   +AR+ +  +                     G ++  + A+ ++L+     Q       +   +Q   FW Y K RD  LKKALQ NF+
Subjt:  ILFDKGIINTPNLARLQRMQEVR------------------QGGLVYGVNAILEQLALSASGQ-------EFAERQALTFWNYVKNRDANLKKALQENFS

Query:  KSYPALPAFPEDLL
        +  P  P FP++LL
Subjt:  KSYPALPAFPEDLL

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]3.9e-2433.09Show/hide
Query:  VVSEFYANVDKEDGFQVIVRGVEVDWSPSAINALYNLQN--FPHAAYNEMAVAPS--------------------------NEQLSDAVR------EQRL
        +V EFYAN+   +   + VRGV+V WS  AINA++ L +    H+ + E    P                              L+ A +      + RL
Subjt:  VVSEFYANVDKEDGFQVIVRGVEVDWSPSAINALYNLQN--FPHAAYNEMAVAPS--------------------------NEQLSDAVR------EQRL

Query:  LPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCSRAGVPTVPEDIILFDKGIINT-----------------PNLA
        LPTTH   VS++R+LL  ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A  P +  +  L + G I+                  P+ +
Subjt:  LPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCSRAGVPTVPEDIILFDKGIINT-----------------PNLA

Query:  RLQRMQEVRQGGLVYGVNAILEQLALSASGQEFAERQALTFWNYVKNRDANLKKALQENFSKSYPALPAFPEDLL
        R       R  G V      LEQ     S QE   +Q   FW Y K RD  LKKALQ NF++  P  PAFP+++L
Subjt:  RLQRMQEVRQGGLVYGVNAILEQLALSASGQEFAERQALTFWNYVKNRDANLKKALQENFSKSYPALPAFPEDLL

TrEMBL top hitse value%identityAlignment
A0A2P5BCG4 Uncharacterized protein (Fragment)1.9e-2432.86Show/hide
Query:  VVSEFYANVDKEDGFQVIVRGVEVDWSPSAINALYNL-----------QNFPH-----------AAYNEMAVAPS------NEQLSDAVR------EQRL
        +V EFYAN+   +   V VRGV+V WS  AINA++ L           QN              AA  E  V+           L+ A +      + RL
Subjt:  VVSEFYANVDKEDGFQVIVRGVEVDWSPSAINALYNL-----------QNFPH-----------AAYNEMAVAPS------NEQLSDAVR------EQRL

Query:  LPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCSRAGVPTVPEDIILFDKGIINTPNLARL---------QRMQEV
        LPTTH  TVS++R+LL  ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A  P +  +  L + G I+   +AR+         Q+    
Subjt:  LPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCSRAGVPTVPEDIILFDKGIINTPNLARL---------QRMQEV

Query:  R---------QGGLVYGVNAILEQLALSASGQ-------EFAERQALTFWNYVKNRDANLKKALQENFSKSYPALPAFPEDLL
        R          G ++  + A+ ++L+     Q       +   +Q   FW Y K RD  LKKALQ NF++  P  PAFP+++L
Subjt:  R---------QGGLVYGVNAILEQLALSASGQ-------EFAERQALTFWNYVKNRDANLKKALQENFSKSYPALPAFPEDLL

A0A2P5CEY2 Uncharacterized protein2.4e-1933.18Show/hide
Query:  NLQNFPHAAYNEMAVAPSNEQLSDAVREQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCSRAGVPTVPEDI
        N+QN P  A  + A+ P+ +     ++  RLLPTTH  TVS++R+LL +++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A  P +  + 
Subjt:  NLQNFPHAAYNEMAVAPSNEQLSDAVREQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCSRAGVPTVPEDI

Query:  ILFDKGIINTPNLARLQRMQEVR------------------QGGLVYGVNAILEQLALSASGQ-------EFAERQALTFWNYVKNRDANLKKALQENFS
         L   G I+   +AR+ +  +                     G ++  + A+ ++L+     Q       +   +Q   FW Y K RD  LKKALQ NF+
Subjt:  ILFDKGIINTPNLARLQRMQEVR------------------QGGLVYGVNAILEQLALSASGQ-------EFAERQALTFWNYVKNRDANLKKALQENFS

Query:  KSYPALPAFPEDLL
        +  P  P FP++LL
Subjt:  KSYPALPAFPEDLL

A0A2P5DXM3 Uncharacterized protein1.9e-2433.09Show/hide
Query:  VVSEFYANVDKEDGFQVIVRGVEVDWSPSAINALYNLQN--FPHAAYNEMAVAPS--------------------------NEQLSDAVR------EQRL
        +V EFYAN+   +   + VRGV+V WS  AINA++ L +    H+ + E    P                              L+ A +      + RL
Subjt:  VVSEFYANVDKEDGFQVIVRGVEVDWSPSAINALYNLQN--FPHAAYNEMAVAPS--------------------------NEQLSDAVR------EQRL

Query:  LPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCSRAGVPTVPEDIILFDKGIINT-----------------PNLA
        LPTTH   VS++R+LL  ++L   SI+VG++I +EI  C  +K G LFFP+ IT LC  A  P +  +  L + G I+                  P+ +
Subjt:  LPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCSRAGVPTVPEDIILFDKGIINT-----------------PNLA

Query:  RLQRMQEVRQGGLVYGVNAILEQLALSASGQEFAERQALTFWNYVKNRDANLKKALQENFSKSYPALPAFPEDLL
        R       R  G V      LEQ     S QE   +Q   FW Y K RD  LKKALQ NF++  P  PAFP+++L
Subjt:  RLQRMQEVRQGGLVYGVNAILEQLALSASGQEFAERQALTFWNYVKNRDANLKKALQENFSKSYPALPAFPEDLL

A0A6A3ASF6 Uncharacterized protein2.4e-1625.94Show/hide
Query:  RFVNNFARAKYAELLKRDFLFERGF------------------------------SVVSEFYANVDKEDGFQVIVRGVEVDWSPSAINALYNLQNF--PH
        +F N+ A+ ++  +  R   FE GF                              S+V EFYAN+ K +   + VRG ++ ++ +AIN  ++LQ     H
Subjt:  RFVNNFARAKYAELLKRDFLFERGF------------------------------SVVSEFYANVDKEDGFQVIVRGVEVDWSPSAINALYNLQNF--PH

Query:  AAYNEMA--------------------------VAPSNEQLSDAVR------EQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKV
        A   E A                           + + E+L    +      + +L+PT+H++ VS  R+LL  +++ S  IDVG+IIV ++  C  KK 
Subjt:  AAYNEMA--------------------------VAPSNEQLSDAVR------EQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKV

Query:  GKLFFPNTITMLCSRAGVPTVPEDIILFDKGIINTPNLARLQRMQEVRQGGLVY----GVNAILEQLALSASGQEFAERQA---------LTFWNYVKNR
          L FPN IT LC +  V     D IL     I    L  L  ++  +    V+    G      +  L A  ++  + QA           F+ YVK+R
Subjt:  GKLFFPNTITMLCSRAGVPTVPEDIILFDKGIINTPNLARLQRMQEVRQGGLVY----GVNAILEQLALSASGQEFAERQA---------LTFWNYVKNR

Query:  DANLKKALQENFSKSYPALPAFPEDLLNPWIPPPSVERGEEDEENEP
        DA ++   QE         P FP+++L    P  + E   E E N P
Subjt:  DANLKKALQENFSKSYPALPAFPEDLLNPWIPPPSVERGEEDEENEP

A0A6A3BU96 Uncharacterized protein4.2e-1629.45Show/hide
Query:  SVVSEFYANVDKEDGFQVIVRGVEVDWSPSAINALYNLQNF--PHAAYNEMA--------------------------VAPSNEQLSDAVR------EQR
        S+V EFYAN+ K +   + VRG ++ ++  AIN  ++LQ     HA + E A                           + + E+L    +      + +
Subjt:  SVVSEFYANVDKEDGFQVIVRGVEVDWSPSAINALYNLQNF--PHAAYNEMA--------------------------VAPSNEQLSDAVR------EQR

Query:  LLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCSRAGVPTVPEDIILFDKGIINTPNLARLQRMQEVRQGGLVY-
        L+PT+H++TVS  R+LL  +++ S  IDVG+IIV ++  C  KK   L FPN IT LC +  V     D IL     I    L  L  ++  +    V+ 
Subjt:  LLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCSRAGVPTVPEDIILFDKGIINTPNLARLQRMQEVRQGGLVY-

Query:  ------GVNAILEQLAL-SASGQEFAERQAL-----TFWNYVKNRDANLKKALQENFSKSYPALPAFPEDLLNPWIPPPSVERGEEDEENEP
                NA +  LAL  A  Q  A+  AL      F+ YVK+RD  ++   QE         P FP+++L    P  + E   E E + P
Subjt:  ------GVNAILEQLAL-SASGQEFAERQAL-----TFWNYVKNRDANLKKALQENFSKSYPALPAFPEDLLNPWIPPPSVERGEEDEENEP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGATACAGAGGAAGTTCAAGAAGAGGGACATAACGAGGAAATTCAAGAGAAACAGAATGAGGATGTGCAGGCAGAGGTTGCGACTGAAAGAGAGCCAGTTCAGGA
GGCTCGTGTTGAGGTCATCATGCCAGAACCTCCGAAACGTCGCCACATTAAGCGAAAGGCTGGGCGCGTTCAGGTGATTCAGACTGATACCCCATCACCGCCGTCGTCGG
ATTCTGAGAAAGAGAAGGCAGAGCGAGAGGAACGAGAGAAAAAAGAAGCTGAGGAAAAGGCAAGAGAAGAGGCAGATAAGAAAGCTGAGGAAGAGCGTTTGCTCAAGCGA
AGGGCAGAAAAGGGCAAAAGTGTTGCTGAAGCATCGGAAGAACACGATGAAATAGAGGAACCACAGTTACCATATGATCGCTTCGTCAACAATTTTGCCAGAGCAAAATA
CGCTGAGCTTCTGAAAAGAGATTTTTTATTTGAGAGGGGATTCAGCGTGGTGAGTGAATTTTATGCTAATGTTGACAAGGAAGATGGTTTCCAGGTAATTGTTCGAGGAG
TCGAGGTAGACTGGAGTCCTAGTGCTATTAACGCACTGTATAACCTTCAGAATTTCCCCCATGCGGCATATAATGAGATGGCTGTAGCGCCATCTAATGAGCAATTAAGT
GATGCTGTGCGGGAACAACGATTGCTTCCAACAACTCACGACTCGACGGTCTCACGGGAACGGGTTCTTCTAGCTTTTGCGATTTTGCGGTCTCTCAGCATTGACGTAGG
AAAGATCATTGTTAATGAAATATCTGGATGTTGGAAGAAAAAGGTGGGGAAGCTGTTTTTTCCGAACACGATCACTATGTTATGCAGCAGAGCAGGAGTGCCCACGGTTC
CAGAGGATATTATTCTATTTGACAAGGGGATCATTAACACGCCTAACTTGGCACGGCTCCAGCGTATGCAGGAGGTACGTCAAGGTGGGCTTGTCTACGGCGTCAACGCG
ATTTTAGAACAACTGGCACTTTCGGCCAGTGGGCAAGAGTTTGCCGAAAGGCAAGCTTTGACCTTCTGGAACTATGTTAAAAATCGTGATGCCAATCTGAAGAAGGCGTT
GCAAGAGAATTTTTCCAAGTCGTATCCAGCCCTTCCAGCATTCCCTGAGGATTTATTGAACCCCTGGATCCCACCCCCATCGGTTGAAAGAGGAGAAGAGGATGAGGAAA
ATGAGCCGGGCCAAGAGGACTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGATACAGAGGAAGTTCAAGAAGAGGGACATAACGAGGAAATTCAAGAGAAACAGAATGAGGATGTGCAGGCAGAGGTTGCGACTGAAAGAGAGCCAGTTCAGGA
GGCTCGTGTTGAGGTCATCATGCCAGAACCTCCGAAACGTCGCCACATTAAGCGAAAGGCTGGGCGCGTTCAGGTGATTCAGACTGATACCCCATCACCGCCGTCGTCGG
ATTCTGAGAAAGAGAAGGCAGAGCGAGAGGAACGAGAGAAAAAAGAAGCTGAGGAAAAGGCAAGAGAAGAGGCAGATAAGAAAGCTGAGGAAGAGCGTTTGCTCAAGCGA
AGGGCAGAAAAGGGCAAAAGTGTTGCTGAAGCATCGGAAGAACACGATGAAATAGAGGAACCACAGTTACCATATGATCGCTTCGTCAACAATTTTGCCAGAGCAAAATA
CGCTGAGCTTCTGAAAAGAGATTTTTTATTTGAGAGGGGATTCAGCGTGGTGAGTGAATTTTATGCTAATGTTGACAAGGAAGATGGTTTCCAGGTAATTGTTCGAGGAG
TCGAGGTAGACTGGAGTCCTAGTGCTATTAACGCACTGTATAACCTTCAGAATTTCCCCCATGCGGCATATAATGAGATGGCTGTAGCGCCATCTAATGAGCAATTAAGT
GATGCTGTGCGGGAACAACGATTGCTTCCAACAACTCACGACTCGACGGTCTCACGGGAACGGGTTCTTCTAGCTTTTGCGATTTTGCGGTCTCTCAGCATTGACGTAGG
AAAGATCATTGTTAATGAAATATCTGGATGTTGGAAGAAAAAGGTGGGGAAGCTGTTTTTTCCGAACACGATCACTATGTTATGCAGCAGAGCAGGAGTGCCCACGGTTC
CAGAGGATATTATTCTATTTGACAAGGGGATCATTAACACGCCTAACTTGGCACGGCTCCAGCGTATGCAGGAGGTACGTCAAGGTGGGCTTGTCTACGGCGTCAACGCG
ATTTTAGAACAACTGGCACTTTCGGCCAGTGGGCAAGAGTTTGCCGAAAGGCAAGCTTTGACCTTCTGGAACTATGTTAAAAATCGTGATGCCAATCTGAAGAAGGCGTT
GCAAGAGAATTTTTCCAAGTCGTATCCAGCCCTTCCAGCATTCCCTGAGGATTTATTGAACCCCTGGATCCCACCCCCATCGGTTGAAAGAGGAGAAGAGGATGAGGAAA
ATGAGCCGGGCCAAGAGGACTGA
Protein sequenceShow/hide protein sequence
MADTEEVQEEGHNEEIQEKQNEDVQAEVATEREPVQEARVEVIMPEPPKRRHIKRKAGRVQVIQTDTPSPPSSDSEKEKAEREEREKKEAEEKAREEADKKAEEERLLKR
RAEKGKSVAEASEEHDEIEEPQLPYDRFVNNFARAKYAELLKRDFLFERGFSVVSEFYANVDKEDGFQVIVRGVEVDWSPSAINALYNLQNFPHAAYNEMAVAPSNEQLS
DAVREQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEISGCWKKKVGKLFFPNTITMLCSRAGVPTVPEDIILFDKGIINTPNLARLQRMQEVRQGGLVYGVNA
ILEQLALSASGQEFAERQALTFWNYVKNRDANLKKALQENFSKSYPALPAFPEDLLNPWIPPPSVERGEEDEENEPGQED