; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006546 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006546
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionpolypyrimidine tract-binding protein 3
Genome locationscaffold9:18477398..18479504
RNA-Seq ExpressionSpg006546
SyntenySpg006546
Gene Ontology termsGO:0006397 - mRNA processing (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR034797 - PTBPH3, RNA recognition motif 3
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025149.1 Polypyrimidine tract-binding protein-like 3 [Cucurbita argyrosperma subsp. argyrosperma]6.7e-11397.65Show/hide
Query:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
        MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNI RIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
Subjt:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH

Query:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG
        PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEI+NLLEEHGPI+NTKLFEMNGKKQALIMFDTEEQATEALVCKHASSL G
Subjt:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG

Query:  SIIRISFSQLQTI
        SIIRISFSQLQ+I
Subjt:  SIIRISFSQLQTI

XP_022925387.1 polypyrimidine tract-binding protein homolog 3-like isoform X1 [Cucurbita moschata]6.7e-11397.65Show/hide
Query:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
        MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNI RIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
Subjt:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH

Query:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG
        PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEI+NLLEEHGPI+NTKLFEMNGKKQALIMFDTEEQATEALVCKHASSL G
Subjt:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG

Query:  SIIRISFSQLQTI
        SIIRISFSQLQ+I
Subjt:  SIIRISFSQLQTI

XP_022973492.1 polypyrimidine tract-binding protein homolog 3 isoform X1 [Cucurbita maxima]6.7e-11397.65Show/hide
Query:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
        MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNI RIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
Subjt:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH

Query:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG
        PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEI+NLLEEHGPI+NTKLFEMNGKKQALIMFDTEEQATEALVCKHASSL G
Subjt:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG

Query:  SIIRISFSQLQTI
        SIIRISFSQLQ+I
Subjt:  SIIRISFSQLQTI

XP_022973494.1 polypyrimidine tract-binding protein homolog 3 isoform X2 [Cucurbita maxima]6.7e-11397.65Show/hide
Query:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
        MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNI RIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
Subjt:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH

Query:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG
        PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEI+NLLEEHGPI+NTKLFEMNGKKQALIMFDTEEQATEALVCKHASSL G
Subjt:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG

Query:  SIIRISFSQLQTI
        SIIRISFSQLQ+I
Subjt:  SIIRISFSQLQTI

XP_038886042.1 polypyrimidine tract-binding protein homolog 3 [Benincasa hispida]6.7e-11398.12Show/hide
Query:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
        MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGA+LFGKRLEVNFSKH
Subjt:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH

Query:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG
        PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEI++LLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSL G
Subjt:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG

Query:  SIIRISFSQLQTI
        SIIRISFSQLQTI
Subjt:  SIIRISFSQLQTI

TrEMBL top hitse value%identityAlignment
A0A6J1DFL0 polypyrimidine tract-binding protein homolog 39.5e-11397.65Show/hide
Query:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
        MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNL+PDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
Subjt:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH

Query:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG
        PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEI  +LEEHGPIVNTKLFEMNGKKQAL+MFDTEEQATEALVCKHASSLGG
Subjt:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG

Query:  SIIRISFSQLQTI
        SIIRISFSQLQTI
Subjt:  SIIRISFSQLQTI

A0A6J1EBK3 polypyrimidine tract-binding protein homolog 3-like isoform X13.3e-11397.65Show/hide
Query:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
        MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNI RIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
Subjt:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH

Query:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG
        PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEI+NLLEEHGPI+NTKLFEMNGKKQALIMFDTEEQATEALVCKHASSL G
Subjt:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG

Query:  SIIRISFSQLQTI
        SIIRISFSQLQ+I
Subjt:  SIIRISFSQLQTI

A0A6J1EHU2 polypyrimidine tract-binding protein homolog 3-like isoform X23.3e-11397.65Show/hide
Query:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
        MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNI RIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
Subjt:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH

Query:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG
        PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEI+NLLEEHGPI+NTKLFEMNGKKQALIMFDTEEQATEALVCKHASSL G
Subjt:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG

Query:  SIIRISFSQLQTI
        SIIRISFSQLQ+I
Subjt:  SIIRISFSQLQTI

A0A6J1IER2 polypyrimidine tract-binding protein homolog 3 isoform X23.3e-11397.65Show/hide
Query:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
        MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNI RIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
Subjt:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH

Query:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG
        PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEI+NLLEEHGPI+NTKLFEMNGKKQALIMFDTEEQATEALVCKHASSL G
Subjt:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG

Query:  SIIRISFSQLQTI
        SIIRISFSQLQ+I
Subjt:  SIIRISFSQLQTI

C0J4I8 RBP503.3e-11397.65Show/hide
Query:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
        MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNI RIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
Subjt:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH

Query:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG
        PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEI+NLLEEHGPI+NTKLFEMNGKKQALIMFDTEEQATEALVCKHASSL G
Subjt:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG

Query:  SIIRISFSQLQTI
        SIIRISFSQLQ+I
Subjt:  SIIRISFSQLQTI

SwissProt top hitse value%identityAlignment
P26599 Polypyrimidine tract-binding protein 14.2e-3339.07Show/hide
Query:  NAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPN
        +AAA AAA G    PG++G  +   +LVSNLNP+R+    LF LF +YG++ R+K+L NK ++ALVQM DG QA+LA+  L G  L GK + +  SKH N
Subjt:  NAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPN

Query:  I---TQGAD----THEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHA
        +    +G +    T +Y NS L+RF +  +KN++    P+  +H+S++   V+EE++  L   +G +V    F    +K ALI   + E+A +AL+  H 
Subjt:  I---TQGAD----THEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHA

Query:  SSLG-GSIIRISFSQ
          LG    +R+SFS+
Subjt:  SSLG-GSIIRISFSQ

Q00438 Polypyrimidine tract-binding protein 11.0e-3137.21Show/hide
Query:  NAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPN
        +AAA AAA G    PG++G  +   +LVSNLNP+R+    LF LF +YG++ R+K+L NK ++ALV+M DG QA+LA+  L G  L GK + +  SKH +
Subjt:  NAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPN

Query:  I---TQGAD----THEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHA
        +    +G +    T +Y +S L+RF +  +KN++    P+  +H+S++   V+E+++ +L   +G +V    F    +K ALI   + E+A +AL+  H 
Subjt:  I---TQGAD----THEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHA

Query:  SSLG-GSIIRISFSQ
          LG    +R+SFS+
Subjt:  SSLG-GSIIRISFSQ

Q29099 Polypyrimidine tract-binding protein 11.3e-3138.6Show/hide
Query:  NAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPN
        +AAA AAA G    PG++G  +   +LVSNLNP+R+    LF LF +Y ++ R+K+L NK ++ALVQM DG QA+LA+  L G  L GK + +  SKH N
Subjt:  NAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPN

Query:  I---TQGAD----THEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHA
        +    +G +    T +Y NS L+RF +  +KN++    P+  +H+S++   ++EE++  L   +G IV    F    +K ALI   + E+A +AL+  H 
Subjt:  I---TQGAD----THEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHA

Query:  SSLG-GSIIRISFSQ
          LG    +R+SFS+
Subjt:  SSLG-GSIIRISFSQ

Q6ICX4 Polypyrimidine tract-binding protein homolog 34.5e-10484.98Show/hide
Query:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
        MAN +A+AAAFGGGLPPG++GTNDRCTVLVSNLN D IDEDKLFNLFS+YGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
Subjt:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH

Query:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG
        PNIT G D+H+Y NSNLNRFNRNAAKNYRYCCSPTKMIH+S+L Q+VTEEE++N ++EHG +VNTK+FEMNGKKQAL+ F+ EE+A EALVCKHA+SLGG
Subjt:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG

Query:  SIIRISFSQLQTI
        SIIRISFSQLQTI
Subjt:  SIIRISFSQLQTI

Q8WN55 Polypyrimidine tract-binding protein 16.0e-3238.14Show/hide
Query:  NAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPN
        +AAA AAA G    PG++G  +   +LVSNLNP+R+    LF LF +YG++ R+K+L NK ++ALVQM DG QA+LA+  L G  L GK + +  SKH +
Subjt:  NAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPN

Query:  I---TQGAD----THEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHA
        +    +G +    T +Y NS L+RF +  +KN++    P+  +H+S++   ++E+++  L   +G IV    F    +K ALI   + E+A +AL+  H 
Subjt:  I---TQGAD----THEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHA

Query:  SSLG-GSIIRISFSQ
          LG    +R+SFS+
Subjt:  SSLG-GSIIRISFSQ

Arabidopsis top hitse value%identityAlignment
AT1G43190.1 polypyrimidine tract-binding protein 33.2e-10584.98Show/hide
Query:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
        MAN +A+AAAFGGGLPPG++GTNDRCTVLVSNLN D IDEDKLFNLFS+YGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
Subjt:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH

Query:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG
        PNIT G D+H+Y NSNLNRFNRNAAKNYRYCCSPTKMIH+S+L Q+VTEEE++N ++EHG +VNTK+FEMNGKKQAL+ F+ EE+A EALVCKHA+SLGG
Subjt:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG

Query:  SIIRISFSQLQTI
        SIIRISFSQLQTI
Subjt:  SIIRISFSQLQTI

AT1G43190.2 polypyrimidine tract-binding protein 33.2e-10584.98Show/hide
Query:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
        MAN +A+AAAFGGGLPPG++GTNDRCTVLVSNLN D IDEDKLFNLFS+YGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
Subjt:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH

Query:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG
        PNIT G D+H+Y NSNLNRFNRNAAKNYRYCCSPTKMIH+S+L Q+VTEEE++N ++EHG +VNTK+FEMNGKKQAL+ F+ EE+A EALVCKHA+SLGG
Subjt:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG

Query:  SIIRISFSQLQTI
        SIIRISFSQLQTI
Subjt:  SIIRISFSQLQTI

AT1G43190.3 polypyrimidine tract-binding protein 33.2e-10584.98Show/hide
Query:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
        MAN +A+AAAFGGGLPPG++GTNDRCTVLVSNLN D IDEDKLFNLFS+YGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH
Subjt:  MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKH

Query:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG
        PNIT G D+H+Y NSNLNRFNRNAAKNYRYCCSPTKMIH+S+L Q+VTEEE++N ++EHG +VNTK+FEMNGKKQAL+ F+ EE+A EALVCKHA+SLGG
Subjt:  PNITQGADTHEYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGG

Query:  SIIRISFSQLQTI
        SIIRISFSQLQTI
Subjt:  SIIRISFSQLQTI

AT3G01150.1 polypyrimidine tract-binding protein 11.0e-0534.07Show/hide
Query:  YRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASS-----LGGSIIRISFSQLQTI
        +RY  +P+K++H+ +L  E  EEE+I+L +  G IVNTK      + QA + F    QA  ++V  +ASS     + G  + I +S    I
Subjt:  YRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASS-----LGGSIIRISFSQLQTI

AT5G53180.1 polypyrimidine tract-binding protein 23.4e-0634.07Show/hide
Query:  YRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASS-----LGGSIIRISFSQLQTI
        +RY   P+K++H+ +L  E TEEE+I L +  G +VNTK      + QA I F+   QA + ++  +ASS     + G  + + +S  Q I
Subjt:  YRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASS-----LGGSIIRISFSQLQTI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAATGCTGCTGCTGTTGCTGCTGCATTTGGAGGAGGTTTGCCACCTGGTGTTAGCGGGACGAATGACAGGTGCACAGTCCTTGTGTCCAATCTGAATCCCGATAG
AATAGATGAAGACAAGCTTTTTAACCTTTTCTCCATCTACGGTAACATTGTAAGAATTAAGCTTCTCCGGAATAAACCTGATCATGCACTTGTTCAGATGGGAGATGGGT
TCCAGGCAGAATTAGCTGTGCACTTTTTGAAGGGAGCGATGTTGTTTGGCAAGAGATTAGAGGTCAACTTCTCAAAGCACCCTAACATTACGCAAGGGGCTGACACTCAT
GAATATGCTAACTCAAATCTTAATCGTTTTAACCGGAATGCTGCAAAGAACTACCGCTATTGCTGCTCCCCAACAAAGATGATCCACATTTCATCTCTATCCCAGGAAGT
AACTGAAGAAGAAATTATAAATCTCCTTGAGGAACACGGGCCGATTGTCAACACTAAGCTCTTTGAGATGAATGGGAAGAAGCAGGCACTCATCATGTTTGACACCGAGG
AGCAGGCCACTGAAGCTCTTGTTTGCAAGCATGCTAGTTCGCTTGGTGGGTCGATCATTCGCATTTCGTTTTCCCAGTTGCAGACTATATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAATGCTGCTGCTGTTGCTGCTGCATTTGGAGGAGGTTTGCCACCTGGTGTTAGCGGGACGAATGACAGGTGCACAGTCCTTGTGTCCAATCTGAATCCCGATAG
AATAGATGAAGACAAGCTTTTTAACCTTTTCTCCATCTACGGTAACATTGTAAGAATTAAGCTTCTCCGGAATAAACCTGATCATGCACTTGTTCAGATGGGAGATGGGT
TCCAGGCAGAATTAGCTGTGCACTTTTTGAAGGGAGCGATGTTGTTTGGCAAGAGATTAGAGGTCAACTTCTCAAAGCACCCTAACATTACGCAAGGGGCTGACACTCAT
GAATATGCTAACTCAAATCTTAATCGTTTTAACCGGAATGCTGCAAAGAACTACCGCTATTGCTGCTCCCCAACAAAGATGATCCACATTTCATCTCTATCCCAGGAAGT
AACTGAAGAAGAAATTATAAATCTCCTTGAGGAACACGGGCCGATTGTCAACACTAAGCTCTTTGAGATGAATGGGAAGAAGCAGGCACTCATCATGTTTGACACCGAGG
AGCAGGCCACTGAAGCTCTTGTTTGCAAGCATGCTAGTTCGCTTGGTGGGTCGATCATTCGCATTTCGTTTTCCCAGTTGCAGACTATATGA
Protein sequenceShow/hide protein sequence
MANAAAVAAAFGGGLPPGVSGTNDRCTVLVSNLNPDRIDEDKLFNLFSIYGNIVRIKLLRNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITQGADTH
EYANSNLNRFNRNAAKNYRYCCSPTKMIHISSLSQEVTEEEIINLLEEHGPIVNTKLFEMNGKKQALIMFDTEEQATEALVCKHASSLGGSIIRISFSQLQTI