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Spg006562 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006562
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein LIKE COV 2-like
Genome locationscaffold9:18902579..18905287
RNA-Seq ExpressionSpg006562
SyntenySpg006562
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7025150.1 Protein LIKE COV 2 [Cucurbita argyrosperma subsp. argyrosperma]5.2e-3988.42Show/hide
Query:  MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIFVCNMLV
        MVD RESTS PMIESDPDDDTPKSPP SPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWF+ FVDSFFSPLYARLGINIF   +++
Subjt:  MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIFVCNMLV

XP_022151734.1 protein LIKE COV 2-like [Momordica charantia]7.6e-3893.26Show/hide
Query:  MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF
        M DTRESTSTPMIESDPDDDTPKSPP   NSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFF TWWF+QFVDSFFSPLYARLGINIF
Subjt:  MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF

XP_022925395.1 protein LIKE COV 2-like [Cucurbita moschata]8.9e-3994.38Show/hide
Query:  MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF
        MVD RESTS PMIESDPDDDTPKSPP SPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWF+ FVDSFFSPLYARLGINIF
Subjt:  MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF

XP_022973505.1 protein LIKE COV 2-like [Cucurbita maxima]1.2e-3894.38Show/hide
Query:  MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF
        MVD RESTS PMIESDPDDDTPKSPP SPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWF+ FVDSFFSPLYARLGINIF
Subjt:  MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF

XP_023534892.1 protein LIKE COV 2-like [Cucurbita pepo subsp. pepo]8.9e-3994.38Show/hide
Query:  MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF
        MVD RESTS PMIESDPDDDTPKSPP SPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWF+ FVDSFFSPLYARLGINIF
Subjt:  MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF

TrEMBL top hitse value%identityAlignment
A0A0A0KDM8 Uncharacterized protein5.9e-3691.01Show/hide
Query:  MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF
        MVD RES S PMI+SDPDDDTPKSPP+SP+SSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFF TWWFVQFVDSFFSPLYARLGI+IF
Subjt:  MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF

A0A1S4E423 LOW QUALITY PROTEIN: protein LIKE COV 26.5e-3588.76Show/hide
Query:  MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF
        MVD RES S PMI+SDPD+DTPKSPP+SP+SSTRKACYAVLQ WVSKKFMTGCVVLFPVAITFF TWWFVQFVDSFFSPLYARLGI+IF
Subjt:  MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF

A0A6J1DDY4 protein LIKE COV 2-like3.7e-3893.26Show/hide
Query:  MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF
        M DTRESTSTPMIESDPDDDTPKSPP   NSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFF TWWF+QFVDSFFSPLYARLGINIF
Subjt:  MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF

A0A6J1EHU8 protein LIKE COV 2-like4.3e-3994.38Show/hide
Query:  MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF
        MVD RESTS PMIESDPDDDTPKSPP SPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWF+ FVDSFFSPLYARLGINIF
Subjt:  MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF

A0A6J1IBI8 protein LIKE COV 2-like5.7e-3994.38Show/hide
Query:  MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF
        MVD RESTS PMIESDPDDDTPKSPP SPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWF+ FVDSFFSPLYARLGINIF
Subjt:  MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF

SwissProt top hitse value%identityAlignment
F4IQJ6 Protein LIKE COV 32.4e-1860.87Show/hide
Query:  PKSPPASP-NSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF
        P SP ASP + + ++A Y V++SW SKKFMTGCV+L P+A+TF+ TWWF+ FVD FFSP+Y  LGIN+F
Subjt:  PKSPPASP-NSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF

F4IUE7 Protein CONTINUOUS VASCULAR RING 15.9e-1750Show/hide
Query:  PMIESDPDDDTPKSPPASPNS-------STRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF
        P+ +S   DD   S P+S +S       S+ +     ++ W SKKFMTGCV+L P+AITF+ TWWF+ FVD FFSP+YA+LGIN+F
Subjt:  PMIESDPDDDTPKSPPASPNS-------STRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF

Q8VY49 Protein LIKE COV 12.2e-1650.59Show/hide
Query:  PMIESDPDDDTPKSPPASPNS------STRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF
        P+ +    DD   S P+S +S      S  +     ++ W SKKFMTGCV+L P+A+TF+TTWWF+ FVD FFSP+YA LGINIF
Subjt:  PMIESDPDDDTPKSPPASPNS------STRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF

Q9C8C1 Protein LIKE COV 24.8e-2765.96Show/hide
Query:  MVDTRESTSTPMIE-----SDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF
        M + +E+T++ + +      DP DD PKSPP SPNSSTRKACY VLQSWVSKKFMTG VVLFPVA+TF  TWWF+QFVD FFSP+Y  LG++IF
Subjt:  MVDTRESTSTPMIE-----SDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF

Arabidopsis top hitse value%identityAlignment
AT1G43130.1 like COV 23.4e-2865.96Show/hide
Query:  MVDTRESTSTPMIE-----SDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF
        M + +E+T++ + +      DP DD PKSPP SPNSSTRKACY VLQSWVSKKFMTG VVLFPVA+TF  TWWF+QFVD FFSP+Y  LG++IF
Subjt:  MVDTRESTSTPMIE-----SDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF

AT2G18460.1 like COV 31.7e-1960.87Show/hide
Query:  PKSPPASP-NSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF
        P SP ASP + + ++A Y V++SW SKKFMTGCV+L P+A+TF+ TWWF+ FVD FFSP+Y  LGIN+F
Subjt:  PKSPPASP-NSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF

AT2G20120.1 Protein of unknown function (DUF502)4.2e-1850Show/hide
Query:  PMIESDPDDDTPKSPPASPNS-------STRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF
        P+ +S   DD   S P+S +S       S+ +     ++ W SKKFMTGCV+L P+AITF+ TWWF+ FVD FFSP+YA+LGIN+F
Subjt:  PMIESDPDDDTPKSPPASPNS-------STRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF

AT2G20130.1 like COV 11.6e-1750.59Show/hide
Query:  PMIESDPDDDTPKSPPASPNS------STRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF
        P+ +    DD   S P+S +S      S  +     ++ W SKKFMTGCV+L P+A+TF+TTWWF+ FVD FFSP+YA LGINIF
Subjt:  PMIESDPDDDTPKSPPASPNS------STRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGATACCAGAGAATCCACTTCCACTCCGATGATCGAATCTGATCCCGACGATGATACTCCGAAGTCCCCTCCAGCTTCTCCGAATTCATCCACTCGCAAGGCTTG
CTATGCTGTTCTTCAGAGTTGGGTCTCAAAGAAGTTCATGACTGGATGTGTGGTTCTGTTTCCTGTTGCCATTACATTCTTCACCACATGGTGGTTTGTCCAGTTTGTGG
ATAGCTTCTTTAGCCCTTTATATGCCAGGCTTGGCATAAACATATTTGTTTGCAATATGTTGGTTACTGAGATGCATAAAGCTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGATACCAGAGAATCCACTTCCACTCCGATGATCGAATCTGATCCCGACGATGATACTCCGAAGTCCCCTCCAGCTTCTCCGAATTCATCCACTCGCAAGGCTTG
CTATGCTGTTCTTCAGAGTTGGGTCTCAAAGAAGTTCATGACTGGATGTGTGGTTCTGTTTCCTGTTGCCATTACATTCTTCACCACATGGTGGTTTGTCCAGTTTGTGG
ATAGCTTCTTTAGCCCTTTATATGCCAGGCTTGGCATAAACATATTTGTTTGCAATATGTTGGTTACTGAGATGCATAAAGCTTATTGA
Protein sequenceShow/hide protein sequence
MVDTRESTSTPMIESDPDDDTPKSPPASPNSSTRKACYAVLQSWVSKKFMTGCVVLFPVAITFFTTWWFVQFVDSFFSPLYARLGINIFVCNMLVTEMHKAY