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Spg006601 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006601
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA-binding storekeeper protein-relatedtranscriptional regulator
Genome locationscaffold7:48261908..48264439
RNA-Seq ExpressionSpg006601
SyntenySpg006601
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR007592 - GLABROUS1 enhancer-binding protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER49346.1 DNA-binding storekeeper protein-relatedtranscriptional regulator [Striga asiatica]2.0e-0537.74Show/hide
Query:  SERQKIKRGRRSLFE--WSKEEELVLLKKLVEFSTNNIPHEE---FYPFLRNGSLAEVPKIQIFDKIQQLKNKYLEDNNGDEIR-------DDEGFELSK
        S ++K K  ++S F+  WS E+E+ LLK L+EF  +    E+   F+ F++N     V K Q+  KI+ LKNKY  +N G EI+         E ++LSK
Subjt:  SERQKIKRGRRSLFE--WSKEEELVLLKKLVEFSTNNIPHEE---FYPFLRNGSLAEVPKIQIFDKIQQLKNKYLEDNNGDEIR-------DDEGFELSK

Query:  RLWGEE
         +WG E
Subjt:  RLWGEE

KAA0054121.1 hypothetical protein E6C27_scaffold131G00330 [Cucumis melo var. makuwa]3.7e-3154.61Show/hide
Query:  KRGRRSLFEWSKEEELVLLKKLVEFSTNNIPHEEFYPFLRNGSLAEVPKIQIFDKIQQLKNKYLED--------------NNGDEIRD--DEGFELSKRL
        K+ R+SLFEWSK EEL LLKKLVEF++ NI  EEFYPFLRNGSLAEV KIQIFDKIQQLK++YLE+               + D+  D  DEGFELS +L
Subjt:  KRGRRSLFEWSKEEELVLLKKLVEFSTNNIPHEEFYPFLRNGSLAEVPKIQIFDKIQQLKNKYLED--------------NNGDEIRD--DEGFELSKRL

Query:  WGEEEEDTETTTEQSCKALDMWNMSHFERLFESHGVESDLFTPSFLEATKRE
        WGE +   ET    + KAL++ + +++E  FES G++  LF PSF +ATK++
Subjt:  WGEEEEDTETTTEQSCKALDMWNMSHFERLFESHGVESDLFTPSFLEATKRE

KAG6585881.1 hypothetical protein SDJN03_18614, partial [Cucurbita argyrosperma subsp. sororia]1.3e-3659.21Show/hide
Query:  SERQKIKRGRRSLFEWSKEEELVLLKKLVEFSTNNIPHEEFYPFLRNGSLAEVPKIQIFDKIQQLKNKYLED--------NNGDEIRD--DEGFELSKRL
        S RQK     ++LF+WS+ EEL LL KLVEFS NN+ HE+FYPFLR+GSLA+VPKIQIFDKIQQLK K+LE         ++ D+ R+  DE FELS RL
Subjt:  SERQKIKRGRRSLFEWSKEEELVLLKKLVEFSTNNIPHEEFYPFLRNGSLAEVPKIQIFDKIQQLKNKYLED--------NNGDEIRD--DEGFELSKRL

Query:  WGEEEEDTETTTEQSCKALDMWNMSHFERLFESHGVESDLFTPSFLEATKRE
        WGE E +TET    + KA D W+MS FE LFE H +  D FTPSFL+ATK+E
Subjt:  WGEEEEDTETTTEQSCKALDMWNMSHFERLFESHGVESDLFTPSFLEATKRE

KGN49711.1 hypothetical protein Csa_018385 [Cucumis sativus]1.3e-2048.2Show/hide
Query:  KRGRRSLFEWSKEEELVLLKKLVEFSTNNIPHEEFYPFLRNGSLAEVPKIQIFDKIQQLKNKYL----------------EDNNGDEIRDDEGFELSKRL
        K+ R+SLFEWSK EEL LLKKLVEF+T NI  EEFYPFLRNGSLAEV + QIF+KIQ+LK +YL                ED++    + DEGFELS  +
Subjt:  KRGRRSLFEWSKEEELVLLKKLVEFSTNNIPHEEFYPFLRNGSLAEVPKIQIFDKIQQLKNKYL----------------EDNNGDEIRDDEGFELSKRL

Query:  WGEEEED-----TETTTEQSCKALD-MWNMSHFERLFES
        WG+ +E      ++   + + K +D ++N+ H   LF+S
Subjt:  WGEEEED-----TETTTEQSCKALD-MWNMSHFERLFES

XP_022158994.1 probable transcription factor At4g00610 [Momordica charantia]3.5e-0530.41Show/hide
Query:  RQKIKRGRRSL-FEWSKEEELVLLKKLVEFSTNNIPH-EEFYPFLRNGSLAEVPKIQIFDKIQQLKNKYLEDN---------NGDEIRDDEGFELSKRLW
        + K K+ + +L F+W +E+E+ +LK+L EFS  N  + EEFY F++     +V   Q+ +KI+ L+ KYLE++         +G +    +    SKR+W
Subjt:  RQKIKRGRRSL-FEWSKEEELVLLKKLVEFSTNNIPH-EEFYPFLRNGSLAEVPKIQIFDKIQQLKNKYLEDN---------NGDEIRDDEGFELSKRLW

Query:  GEEEEDTETTTEQ--SCKALDMWNMSHFERLFESHGVESDLFTPSFLE
        G  E + E   +     ++++ +     E L E   +E D   PS LE
Subjt:  GEEEEDTETTTEQ--SCKALDMWNMSHFERLFESHGVESDLFTPSFLE

TrEMBL top hitse value%identityAlignment
A0A0A0KPQ5 Uncharacterized protein6.4e-2148.2Show/hide
Query:  KRGRRSLFEWSKEEELVLLKKLVEFSTNNIPHEEFYPFLRNGSLAEVPKIQIFDKIQQLKNKYL----------------EDNNGDEIRDDEGFELSKRL
        K+ R+SLFEWSK EEL LLKKLVEF+T NI  EEFYPFLRNGSLAEV + QIF+KIQ+LK +YL                ED++    + DEGFELS  +
Subjt:  KRGRRSLFEWSKEEELVLLKKLVEFSTNNIPHEEFYPFLRNGSLAEVPKIQIFDKIQQLKNKYL----------------EDNNGDEIRDDEGFELSKRL

Query:  WGEEEED-----TETTTEQSCKALD-MWNMSHFERLFES
        WG+ +E      ++   + + K +D ++N+ H   LF+S
Subjt:  WGEEEED-----TETTTEQSCKALD-MWNMSHFERLFES

A0A5A7PDL7 DNA-binding storekeeper protein-relatedtranscriptional regulator1.1e-0437.14Show/hide
Query:  SERQKIKRGRRSLFE--WSKEEELVLLKKLVEFSTNNIPHEE---FYPFLRNGSLAEVPKIQIFDKIQQLKNKYLEDNNGD-EIRDD-----EGFELSKR
        + ++K K  +RS F+  WS+E+E+ +LK L+EF  +    E+   F+ F++N    EV KIQI  KI+ LK K+  + N + + ++D     E +ELSK 
Subjt:  SERQKIKRGRRSLFE--WSKEEELVLLKKLVEFSTNNIPHEE---FYPFLRNGSLAEVPKIQIFDKIQQLKNKYLEDNNGD-EIRDD-----EGFELSKR

Query:  LWGEE
        +WG E
Subjt:  LWGEE

A0A5A7QWK1 DNA-binding storekeeper protein-relatedtranscriptional regulator9.9e-0637.74Show/hide
Query:  SERQKIKRGRRSLFE--WSKEEELVLLKKLVEFSTNNIPHEE---FYPFLRNGSLAEVPKIQIFDKIQQLKNKYLEDNNGDEIR-------DDEGFELSK
        S ++K K  ++S F+  WS E+E+ LLK L+EF  +    E+   F+ F++N     V K Q+  KI+ LKNKY  +N G EI+         E ++LSK
Subjt:  SERQKIKRGRRSLFE--WSKEEELVLLKKLVEFSTNNIPHEE---FYPFLRNGSLAEVPKIQIFDKIQQLKNKYLEDNNGDEIR-------DDEGFELSK

Query:  RLWGEE
         +WG E
Subjt:  RLWGEE

A0A5A7UKP8 Uncharacterized protein1.8e-3154.61Show/hide
Query:  KRGRRSLFEWSKEEELVLLKKLVEFSTNNIPHEEFYPFLRNGSLAEVPKIQIFDKIQQLKNKYLED--------------NNGDEIRD--DEGFELSKRL
        K+ R+SLFEWSK EEL LLKKLVEF++ NI  EEFYPFLRNGSLAEV KIQIFDKIQQLK++YLE+               + D+  D  DEGFELS +L
Subjt:  KRGRRSLFEWSKEEELVLLKKLVEFSTNNIPHEEFYPFLRNGSLAEVPKIQIFDKIQQLKNKYLED--------------NNGDEIRD--DEGFELSKRL

Query:  WGEEEEDTETTTEQSCKALDMWNMSHFERLFESHGVESDLFTPSFLEATKRE
        WGE +   ET    + KAL++ + +++E  FES G++  LF PSF +ATK++
Subjt:  WGEEEEDTETTTEQSCKALDMWNMSHFERLFESHGVESDLFTPSFLEATKRE

A0A6J1E125 probable transcription factor At4g006101.7e-0530.41Show/hide
Query:  RQKIKRGRRSL-FEWSKEEELVLLKKLVEFSTNNIPH-EEFYPFLRNGSLAEVPKIQIFDKIQQLKNKYLEDN---------NGDEIRDDEGFELSKRLW
        + K K+ + +L F+W +E+E+ +LK+L EFS  N  + EEFY F++     +V   Q+ +KI+ L+ KYLE++         +G +    +    SKR+W
Subjt:  RQKIKRGRRSL-FEWSKEEELVLLKKLVEFSTNNIPH-EEFYPFLRNGSLAEVPKIQIFDKIQQLKNKYLEDN---------NGDEIRDDEGFELSKRLW

Query:  GEEEEDTETTTEQ--SCKALDMWNMSHFERLFESHGVESDLFTPSFLE
        G  E + E   +     ++++ +     E L E   +E D   PS LE
Subjt:  GEEEEDTETTTEQ--SCKALDMWNMSHFERLFESHGVESDLFTPSFLE

SwissProt top hitse value%identityAlignment
O23077 Transcription factor STKL23.1e-0425.9Show/hide
Query:  WSKEEELVLLKKLVEF--STNNIPHEE---FYPFLRNGSLAEVPKIQIFDKIQQLKNKYL---EDNNGDEIRDDEGFELSKRLWGEEEEDTETTTEQSCK
        WS+E+E+ LL+ +++F   T   P +    F+   +     +V  +Q FDKI++LKNKY    ++ +G+   D +   L+  +WG +  + E+  ++   
Subjt:  WSKEEELVLLKKLVEF--STNNIPHEE---FYPFLRNGSLAEVPKIQIFDKIQQLKNKYL---EDNNGDEIRDDEGFELSKRLWGEEEEDTETTTEQSCK

Query:  ALDMWNMSHFERLFESH----------GVESDLFTPSFL
         L     +  E+  E            G +S+ F  SFL
Subjt:  ALDMWNMSHFERLFESH----------GVESDLFTPSFL

Arabidopsis top hitse value%identityAlignment
AT4G00250.1 DNA-binding storekeeper protein-related transcriptional regulator2.2e-0525.9Show/hide
Query:  WSKEEELVLLKKLVEF--STNNIPHEE---FYPFLRNGSLAEVPKIQIFDKIQQLKNKYL---EDNNGDEIRDDEGFELSKRLWGEEEEDTETTTEQSCK
        WS+E+E+ LL+ +++F   T   P +    F+   +     +V  +Q FDKI++LKNKY    ++ +G+   D +   L+  +WG +  + E+  ++   
Subjt:  WSKEEELVLLKKLVEF--STNNIPHEE---FYPFLRNGSLAEVPKIQIFDKIQQLKNKYL---EDNNGDEIRDDEGFELSKRLWGEEEEDTETTTEQSCK

Query:  ALDMWNMSHFERLFESH----------GVESDLFTPSFL
         L     +  E+  E            G +S+ F  SFL
Subjt:  ALDMWNMSHFERLFESH----------GVESDLFTPSFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTGTTCAGAGAGACAAAAGATCAAAAGGGGAAGAAGGAGTTTATTTGAATGGAGTAAAGAGGAAGAGTTGGTTCTACTAAAGAAGCTGGTTGAGTTCTCTACCAA
TAACATTCCTCACGAAGAATTTTATCCGTTTCTGAGAAATGGGTCACTTGCGGAGGTGCCCAAGATTCAAATATTCGACAAGATTCAACAACTCAAAAACAAATATTTGG
AGGATAATAATGGTGATGAGATCAGGGACGACGAGGGTTTTGAGTTATCCAAGAGACTTTGGGGTGAAGAAGAAGAAGACACTGAGACAACAACCGAACAAAGCTGTAAA
GCATTGGATATGTGGAATATGAGTCACTTTGAAAGGCTGTTTGAGAGTCATGGGGTTGAATCAGATCTATTTACGCCCTCGTTTCTGGAGGCAACCAAGAGGGAGAGTAT
CCTTGCTGTCATCTTTACCTTCGTTCTAGCTTATCGACACTTTGTGGTGAAGATATATCTAGCTACGAGCAAAGTTCACAAGCTCGGAATGATACTCACTTCCCTAAGTA
AACCTTTCATGCAGTGGCAAACCATGGGTGTCATGAATGCCCCTGGTTACTTAGTAAACCCTAGGAAGGAGGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTGTTCAGAGAGACAAAAGATCAAAAGGGGAAGAAGGAGTTTATTTGAATGGAGTAAAGAGGAAGAGTTGGTTCTACTAAAGAAGCTGGTTGAGTTCTCTACCAA
TAACATTCCTCACGAAGAATTTTATCCGTTTCTGAGAAATGGGTCACTTGCGGAGGTGCCCAAGATTCAAATATTCGACAAGATTCAACAACTCAAAAACAAATATTTGG
AGGATAATAATGGTGATGAGATCAGGGACGACGAGGGTTTTGAGTTATCCAAGAGACTTTGGGGTGAAGAAGAAGAAGACACTGAGACAACAACCGAACAAAGCTGTAAA
GCATTGGATATGTGGAATATGAGTCACTTTGAAAGGCTGTTTGAGAGTCATGGGGTTGAATCAGATCTATTTACGCCCTCGTTTCTGGAGGCAACCAAGAGGGAGAGTAT
CCTTGCTGTCATCTTTACCTTCGTTCTAGCTTATCGACACTTTGTGGTGAAGATATATCTAGCTACGAGCAAAGTTCACAAGCTCGGAATGATACTCACTTCCCTAAGTA
AACCTTTCATGCAGTGGCAAACCATGGGTGTCATGAATGCCCCTGGTTACTTAGTAAACCCTAGGAAGGAGGAGTAA
Protein sequenceShow/hide protein sequence
MSCSERQKIKRGRRSLFEWSKEEELVLLKKLVEFSTNNIPHEEFYPFLRNGSLAEVPKIQIFDKIQQLKNKYLEDNNGDEIRDDEGFELSKRLWGEEEEDTETTTEQSCK
ALDMWNMSHFERLFESHGVESDLFTPSFLEATKRESILAVIFTFVLAYRHFVVKIYLATSKVHKLGMILTSLSKPFMQWQTMGVMNAPGYLVNPRKEE