; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006603 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006603
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold7:48400299..48408605
RNA-Seq ExpressionSpg006603
SyntenySpg006603
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001878 - Zinc finger, CCHC-type
IPR025836 - Zinc knuckle CX2CX4HX4C
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607616.1 hypothetical protein SDJN03_00958, partial [Cucurbita argyrosperma subsp. sororia]1.0e-2445.83Show/hide
Query:  MEEVANIEDLVAPDSYQSEEECDLLNSKSPSLYRSALIRKNLVNNNEDDTANSQDCSSEPPKTKVTRSNSQLQLEDDNINIDEAEEENDDDEEG--YKFY
        MEE+ NIEDLV  DSY S+EE +             +IR N   ++    ++    ++ PP +     NS  + E +     E EEE  ++EE   +KFY
Subjt:  MEEVANIEDLVAPDSYQSEEECDLLNSKSPSLYRSALIRKNLVNNNEDDTANSQDCSSEPPKTKVTRSNSQLQLEDDNINIDEAEEENDDDEEG--YKFY

Query:  RVWFDAFLAKHGLDIQHLD--QSTVQQLEKSWLNRQLVAAHMRFKEAEIDINFITYRYAICKQWLSSL
          WF  F++KHGLD++HLD   S VQ+LEK W+ RQ+ AA MR KEAEIDIN I  RYAICKQWLSSL
Subjt:  RVWFDAFLAKHGLDIQHLD--QSTVQQLEKSWLNRQLVAAHMRFKEAEIDINFITYRYAICKQWLSSL

XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.4e-1537.13Show/hide
Query:  AEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVLSPLKRGIFLKSGSKGEDKWIPVTYDKLPDFCYGCGRLGHTIKECGD------TMGPSEGELLY
        A  +G  LG VE+++  +  D   G  +RV+++IDV  PL+RGI LK+ S G+D W P+ Y+KLPDFCY CG++GH+ +EC        T  P +    Y
Subjt:  AEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVLSPLKRGIFLKSGSKGEDKWIPVTYDKLPDFCYGCGRLGHTIKECGD------TMGPSEGELLY

Query:  GAWLREPF---RIGNLERKFSVRNIHGR-GRGRTWSGGRGHVRSDFSYSGDENEREDRNVSSDHRTGVGNSPETTPKSPARPSAVPEKESVTAGKTNMEV
        G WLR       + + E +   R   GR GRG   +GGRG  R D+    DEN R+     S HR  V    +           VP +ESVTA +  +  
Subjt:  GAWLREPF---RIGNLERKFSVRNIHGR-GRGRTWSGGRGHVRSDFSYSGDENEREDRNVSSDHRTGVGNSPETTPKSPARPSAVPEKESVTAGKTNMEV

Query:  EK
         K
Subjt:  EK

XP_030942000.1 uncharacterized protein At4g02000-like [Quercus lobata]1.9e-1542.62Show/hide
Query:  RSEQKSSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVLSPLKRGIFLKSGSKGEDKWIPVTYDKLPDFCYGCGRLGHTIKEC------GDTMGP
        R   K +AEAIG  LG +E+VDI    +   GC LRV++QI++  PL RG  + SG + E +W+   Y+KLP FCY CG L H  K+C      G T+  
Subjt:  RSEQKSSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVLSPLKRGIFLKSGSKGEDKWIPVTYDKLPDFCYGCGRLGHTIKEC------GDTMGP

Query:  SEGELLYGAWLREPFRIGNLER
         + +  YGAWLR P  + NL++
Subjt:  SEGELLYGAWLREPFRIGNLER

XP_035543083.1 uncharacterized protein LOC118346304 [Juglans regia]1.1e-1538.89Show/hide
Query:  RSEQKSSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVLSPLKRGIFLKSGSKGEDKWIPVTYDKLPDFCYGCGRLGHTIKECGDTMGPSEGELL
        R+      E IG  +GKVE+VD+ + E  +WG  L+V+I +DV+ PL RG     G+ GE  W+  +Y++LP+FCY CG LGH  +ECG     +EG+ +
Subjt:  RSEQKSSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVLSPLKRGIFLKSGSKGEDKWIPVTYDKLPDFCYGCGRLGHTIKECGDTMGPSEGELL

Query:  ----YGAWLR-----EPFRIGNLERKFSVRNIHGRGRGRTWSGG
            YGAWLR     + +R G    +  +    G  +GR  SGG
Subjt:  ----YGAWLR-----EPFRIGNLERKFSVRNIHGRGRGRTWSGG

XP_042944768.1 uncharacterized protein LOC122278651 [Carya illinoinensis]3.2e-1539Show/hide
Query:  IGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVLSPLKRGIFLKSGSKGEDKWIPVTYDKLPDFCYGCGRLGHTIKECGDT-MGPSEGELLYGAWLREPF
        +G++LG+V ++D+ E+ +  WG  +R+++ +D+  PL+R  +LK G  G+  W+  +Y++LP+ CY CG LGHT++EC  + +G S  +L YG W+R  F
Subjt:  IGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVLSPLKRGIFLKSGSKGEDKWIPVTYDKLPDFCYGCGRLGHTIKECGDT-MGPSEGELLYGAWLREPF

TrEMBL top hitse value%identityAlignment
A0A2N9GF83 CCHC-type domain-containing protein2.2e-1741.22Show/hide
Query:  KSSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVLSPLKRGIFLKSGSKGEDKWIPVTYDKLPDFCYGCGRLGHTIKEC-----GDTMGPSEGEL
        K + E +G  +G VEKVD+  E+   WG  LRV+I +D+  P++RG  +  GS G+  WI   Y++LP FC+ CG+LGH  +EC     G  M  S+ + 
Subjt:  KSSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVLSPLKRGIFLKSGSKGEDKWIPVTYDKLPDFCYGCGRLGHTIKEC-----GDTMGPSEGEL

Query:  LYGAWLREPFRIGNLERKFSVRNIHGRGRGR
         YG WLR P      E  F  RN+HG  R R
Subjt:  LYGAWLREPFRIGNLERKFSVRNIHGRGRGR

A0A6J1D765 uncharacterized protein LOC1110179027.0e-1637.13Show/hide
Query:  AEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVLSPLKRGIFLKSGSKGEDKWIPVTYDKLPDFCYGCGRLGHTIKECGD------TMGPSEGELLY
        A  +G  LG VE+++  +  D   G  +RV+++IDV  PL+RGI LK+ S G+D W P+ Y+KLPDFCY CG++GH+ +EC        T  P +    Y
Subjt:  AEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVLSPLKRGIFLKSGSKGEDKWIPVTYDKLPDFCYGCGRLGHTIKECGD------TMGPSEGELLY

Query:  GAWLREPF---RIGNLERKFSVRNIHGR-GRGRTWSGGRGHVRSDFSYSGDENEREDRNVSSDHRTGVGNSPETTPKSPARPSAVPEKESVTAGKTNMEV
        G WLR       + + E +   R   GR GRG   +GGRG  R D+    DEN R+     S HR  V    +           VP +ESVTA +  +  
Subjt:  GAWLREPF---RIGNLERKFSVRNIHGR-GRGRTWSGGRGHVRSDFSYSGDENEREDRNVSSDHRTGVGNSPETTPKSPARPSAVPEKESVTAGKTNMEV

Query:  EK
         K
Subjt:  EK

A0A6P9EFS2 uncharacterized protein LOC1183463045.4e-1638.89Show/hide
Query:  RSEQKSSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVLSPLKRGIFLKSGSKGEDKWIPVTYDKLPDFCYGCGRLGHTIKECGDTMGPSEGELL
        R+      E IG  +GKVE+VD+ + E  +WG  L+V+I +DV+ PL RG     G+ GE  W+  +Y++LP+FCY CG LGH  +ECG     +EG+ +
Subjt:  RSEQKSSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVLSPLKRGIFLKSGSKGEDKWIPVTYDKLPDFCYGCGRLGHTIKECGDTMGPSEGELL

Query:  ----YGAWLR-----EPFRIGNLERKFSVRNIHGRGRGRTWSGG
            YGAWLR     + +R G    +  +    G  +GR  SGG
Subjt:  ----YGAWLR-----EPFRIGNLERKFSVRNIHGRGRGRTWSGG

A0A7N2R0C3 Reverse transcriptase domain-containing protein4.5e-1531.18Show/hide
Query:  RSEQKSSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVLSPLKRGIFLKSGSKGEDKWIPVTYDKLPDFCYGCGRLGHTIKECGDTMGP----SE
        +S  K + +AIG  +GK  +VD+ EE    WG  LRV+++IDV   L RG  +    KGE +W+   Y++LP+FCY CG L H +K+C +  G      E
Subjt:  RSEQKSSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVLSPLKRGIFLKSGSKGEDKWIPVTYDKLPDFCYGCGRLGHTIKECGDTMGP----SE

Query:  GELLYGAWLR-EPFRIGNLERKFSVRNIHGRGRGR-----TWSGGRGHVRSDFSYSGDENEREDRNVSSDHRTG--VGNSPETTPKSPARPSAVP-----
         +L YGAWLR EP R G  +  F+ + + G  + +         GR  V+   +    E E      S   R G  +G    TT K      A       
Subjt:  GELLYGAWLR-EPFRIGNLERKFSVRNIHGRGRGR-----TWSGGRGHVRSDFSYSGDENEREDRNVSSDHRTG--VGNSPETTPKSPARPSAVP-----

Query:  EKESVTAGKTNMEVEKTK--LMGADLGNIFNGKKEVLNDNGGILNVAEEIPLKEDSAVSNEKGKEK---VPFLMEVDME
          E V  G+ N EV            G   N  K + N   G+ N      +K D+ V    G +K    P  M+ D E
Subjt:  EKESVTAGKTNMEVEKTK--LMGADLGNIFNGKKEVLNDNGGILNVAEEIPLKEDSAVSNEKGKEK---VPFLMEVDME

A0A803P119 Uncharacterized protein1.0e-1437.5Show/hide
Query:  SEQKSSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVLSPLKRGIFLKSGSKGEDKWIPVTYDKLPDFCYGCGRLGHTIKEC-----GDTMGPSE
        S+ K  A  IG+++G+  KVD    E+  WG  +R++I +DV  PL RG  LK     +D W+ + Y+KLPD CY CGRLGHT   C      + +G  +
Subjt:  SEQKSSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVLSPLKRGIFLKSGSKGEDKWIPVTYDKLPDFCYGCGRLGHTIKEC-----GDTMGPSE

Query:  GELLYGAWLR-EPFRIGNLERKFSVRNI
          L YG W++ +P       R  S+ N+
Subjt:  GELLYGAWLR-EPFRIGNLERKFSVRNI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAAGGGGAAGAAGAAGAGTTGACAAAACGCTTGGCTGAACTCCATGTTACGCCTGCAGAAAAAGCAAGCGTTTTTCAACTCCCAGATAGCGAAATAGATCGATC
AGAACAGAAGTCATCGGCGGAGGCAATTGGAAATTTGCTCGGGAAAGTGGAAAAAGTAGATATACAAGAGGAAGAAGATCCTTCATGGGGTTGTTCATTACGGGTGAAGA
TACAGATTGACGTCTTGAGCCCGTTGAAAAGAGGTATTTTTCTGAAATCAGGAAGCAAGGGAGAGGATAAGTGGATACCGGTAACGTACGATAAATTGCCGGATTTCTGC
TATGGATGCGGAAGATTGGGTCACACGATTAAGGAGTGTGGAGATACGATGGGTCCAAGTGAGGGGGAGCTGTTGTACGGTGCTTGGCTGAGAGAACCCTTTCGGATAGG
CAATTTGGAAAGAAAATTTTCGGTAAGAAACATTCATGGCCGGGGGCGGGGCAGAACATGGAGTGGTGGCAGAGGACATGTGCGATCAGATTTTTCTTATAGTGGGGATG
AGAACGAACGGGAGGATCGGAATGTTTCGTCGGATCATCGGACGGGGGTGGGTAATTCGCCGGAGACGACACCAAAATCTCCGGCAAGACCATCCGCGGTACCTGAAAAG
GAAAGTGTAACGGCCGGAAAGACAAATATGGAAGTTGAGAAAACTAAATTAATGGGGGCAGATTTGGGGAACATCTTCAACGGGAAAAAGGAAGTTTTAAATGATAATGG
AGGGATTCTGAATGTTGCCGAAGAGATTCCTTTAAAGGAGGATTCGGCGGTGAGTAACGAAAAAGGAAAGGAAAAAGTACCCTTTCTCATGGAGGTTGATATGGAGCATA
AGGATATGGGAGATGAATATACAAAATTAAAATTGGATTTGGCTAAGGACAAAGGGCAACAAACAGAGGAGCTAGATACTGGGCCTCATACGGAAAAATGGGCTAAGAAT
GAAAATCAACAAGTGGATGGGCGGGATAAGGGGCTTGTGACTAAGGATGATTTTGGGCCTAGAAAATGGAAAAGGCTTGGACGGGAGAAACAAAAAGTGATGGAGGAAGT
AGCTAACATTGAAGATCTAGTGGCTCCTGATTCCTACCAATCGGAAGAAGAATGTGACTTATTGAACTCTAAATCTCCAAGTCTTTACAGATCGGCCTTGATAAGAAAGA
ATCTCGTCAACAATAACGAGGATGATACAGCTAATTCACAAGATTGTTCGTCTGAGCCGCCTAAAACTAAAGTAACAAGAAGCAACAGTCAGTTGCAGTTGGAGGATGAT
AATATTAATATTGACGAGGCTGAAGAAGAAAATGATGATGATGAAGAAGGTTACAAGTTCTATAGGGTGTGGTTTGATGCATTCCTTGCTAAACATGGGCTTGACATCCA
ACATTTGGACCAATCCACAGTTCAACAACTTGAGAAATCTTGGCTCAACAGACAACTTGTTGCTGCTCACATGCGTTTCAAGGAGGCTGAAATTGATATCAACTTCATCA
CTTACAGATATGCTATCTGCAAACAATGGCTTTCTTCCTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAAGGGGAAGAAGAAGAGTTGACAAAACGCTTGGCTGAACTCCATGTTACGCCTGCAGAAAAAGCAAGCGTTTTTCAACTCCCAGATAGCGAAATAGATCGATC
AGAACAGAAGTCATCGGCGGAGGCAATTGGAAATTTGCTCGGGAAAGTGGAAAAAGTAGATATACAAGAGGAAGAAGATCCTTCATGGGGTTGTTCATTACGGGTGAAGA
TACAGATTGACGTCTTGAGCCCGTTGAAAAGAGGTATTTTTCTGAAATCAGGAAGCAAGGGAGAGGATAAGTGGATACCGGTAACGTACGATAAATTGCCGGATTTCTGC
TATGGATGCGGAAGATTGGGTCACACGATTAAGGAGTGTGGAGATACGATGGGTCCAAGTGAGGGGGAGCTGTTGTACGGTGCTTGGCTGAGAGAACCCTTTCGGATAGG
CAATTTGGAAAGAAAATTTTCGGTAAGAAACATTCATGGCCGGGGGCGGGGCAGAACATGGAGTGGTGGCAGAGGACATGTGCGATCAGATTTTTCTTATAGTGGGGATG
AGAACGAACGGGAGGATCGGAATGTTTCGTCGGATCATCGGACGGGGGTGGGTAATTCGCCGGAGACGACACCAAAATCTCCGGCAAGACCATCCGCGGTACCTGAAAAG
GAAAGTGTAACGGCCGGAAAGACAAATATGGAAGTTGAGAAAACTAAATTAATGGGGGCAGATTTGGGGAACATCTTCAACGGGAAAAAGGAAGTTTTAAATGATAATGG
AGGGATTCTGAATGTTGCCGAAGAGATTCCTTTAAAGGAGGATTCGGCGGTGAGTAACGAAAAAGGAAAGGAAAAAGTACCCTTTCTCATGGAGGTTGATATGGAGCATA
AGGATATGGGAGATGAATATACAAAATTAAAATTGGATTTGGCTAAGGACAAAGGGCAACAAACAGAGGAGCTAGATACTGGGCCTCATACGGAAAAATGGGCTAAGAAT
GAAAATCAACAAGTGGATGGGCGGGATAAGGGGCTTGTGACTAAGGATGATTTTGGGCCTAGAAAATGGAAAAGGCTTGGACGGGAGAAACAAAAAGTGATGGAGGAAGT
AGCTAACATTGAAGATCTAGTGGCTCCTGATTCCTACCAATCGGAAGAAGAATGTGACTTATTGAACTCTAAATCTCCAAGTCTTTACAGATCGGCCTTGATAAGAAAGA
ATCTCGTCAACAATAACGAGGATGATACAGCTAATTCACAAGATTGTTCGTCTGAGCCGCCTAAAACTAAAGTAACAAGAAGCAACAGTCAGTTGCAGTTGGAGGATGAT
AATATTAATATTGACGAGGCTGAAGAAGAAAATGATGATGATGAAGAAGGTTACAAGTTCTATAGGGTGTGGTTTGATGCATTCCTTGCTAAACATGGGCTTGACATCCA
ACATTTGGACCAATCCACAGTTCAACAACTTGAGAAATCTTGGCTCAACAGACAACTTGTTGCTGCTCACATGCGTTTCAAGGAGGCTGAAATTGATATCAACTTCATCA
CTTACAGATATGCTATCTGCAAACAATGGCTTTCTTCCTTGTAA
Protein sequenceShow/hide protein sequence
MAKGEEEELTKRLAELHVTPAEKASVFQLPDSEIDRSEQKSSAEAIGNLLGKVEKVDIQEEEDPSWGCSLRVKIQIDVLSPLKRGIFLKSGSKGEDKWIPVTYDKLPDFC
YGCGRLGHTIKECGDTMGPSEGELLYGAWLREPFRIGNLERKFSVRNIHGRGRGRTWSGGRGHVRSDFSYSGDENEREDRNVSSDHRTGVGNSPETTPKSPARPSAVPEK
ESVTAGKTNMEVEKTKLMGADLGNIFNGKKEVLNDNGGILNVAEEIPLKEDSAVSNEKGKEKVPFLMEVDMEHKDMGDEYTKLKLDLAKDKGQQTEELDTGPHTEKWAKN
ENQQVDGRDKGLVTKDDFGPRKWKRLGREKQKVMEEVANIEDLVAPDSYQSEEECDLLNSKSPSLYRSALIRKNLVNNNEDDTANSQDCSSEPPKTKVTRSNSQLQLEDD
NINIDEAEEENDDDEEGYKFYRVWFDAFLAKHGLDIQHLDQSTVQQLEKSWLNRQLVAAHMRFKEAEIDINFITYRYAICKQWLSSL