; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006626 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006626
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionComponent of oligomeric Golgi complex 3
Genome locationscaffold7:47855271..47857107
RNA-Seq ExpressionSpg006626
SyntenySpg006626
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0005801 - cis-Golgi network (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR007265 - Conserved oligomeric Golgi complex, subunit 3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027701.1 Conserved oligomeric Golgi complex subunit 3 [Cucurbita argyrosperma subsp. argyrosperma]2.3e-4789.92Show/hide
Query:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ
        VTAVKVA  SG+QNQKLES+LEKPLRDQAFATP+KV ELVQKVN AIQQQLP+VM KMKLYLQNPTTR+ILFNPIKVNIVEAHLQVQNLLKAEYSSEE+Q
Subjt:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ

Query:  ESINMTPIHVLQTQLDNLL
        E+INMTPIHVLQTQLDNLL
Subjt:  ESINMTPIHVLQTQLDNLL

XP_004142363.1 conserved oligomeric Golgi complex subunit 3 isoform X1 [Cucumis sativus]2.3e-4789.92Show/hide
Query:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ
        VTAVKVALSSGNQNQKLE  +EKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVM KMKLYLQNPTTR+ILFNPIKVNIVEAHLQVQNL+KAEYSS    
Subjt:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ

Query:  ESINMTPIHVLQTQLDNLL
        E+INMTPIH+LQTQLDNLL
Subjt:  ESINMTPIHVLQTQLDNLL

XP_023539647.1 conserved oligomeric Golgi complex subunit 3 [Cucurbita pepo subsp. pepo]1.0e-4790.76Show/hide
Query:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ
        VTAVKVA  SG+QNQKLES+LEKPLRDQAFATP+KV ELVQKVN AIQQQLPMVM KMKLYLQNPTTR+ILFNPIKVNIVEAHLQVQNLLKAEYSSEE+Q
Subjt:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ

Query:  ESINMTPIHVLQTQLDNLL
        E+INMTPIHVLQTQLDNLL
Subjt:  ESINMTPIHVLQTQLDNLL

XP_031742126.1 conserved oligomeric Golgi complex subunit 3 isoform X2 [Cucumis sativus]2.3e-4789.92Show/hide
Query:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ
        VTAVKVALSSGNQNQKLE  +EKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVM KMKLYLQNPTTR+ILFNPIKVNIVEAHLQVQNL+KAEYSS    
Subjt:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ

Query:  ESINMTPIHVLQTQLDNLL
        E+INMTPIH+LQTQLDNLL
Subjt:  ESINMTPIHVLQTQLDNLL

XP_038892000.1 conserved oligomeric Golgi complex subunit 3 [Benincasa hispida]1.3e-4790.76Show/hide
Query:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ
        VTAVKV LSSGNQNQKLE VLEKPLRDQAFATPDKVAEL+QKVNTAIQQQLPMVM KMKLYLQNPTTR+ILFNPIKVNIVEAHLQVQNL+KAEYSS    
Subjt:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ

Query:  ESINMTPIHVLQTQLDNLL
        E+INMTPIHVLQTQLDNLL
Subjt:  ESINMTPIHVLQTQLDNLL

TrEMBL top hitse value%identityAlignment
A0A0A0KRZ0 Component of oligomeric Golgi complex 31.1e-4789.92Show/hide
Query:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ
        VTAVKVALSSGNQNQKLE  +EKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVM KMKLYLQNPTTR+ILFNPIKVNIVEAHLQVQNL+KAEYSS    
Subjt:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ

Query:  ESINMTPIHVLQTQLDNLL
        E+INMTPIH+LQTQLDNLL
Subjt:  ESINMTPIHVLQTQLDNLL

A0A1S3CCR3 Component of oligomeric Golgi complex 36.0e-4687.39Show/hide
Query:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ
        V+AVKVALSSGNQNQKLE  +EKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVM KMKLYLQN TTR+ILFNPIKVNIVEAHLQVQNL+KA+YSS    
Subjt:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ

Query:  ESINMTPIHVLQTQLDNLL
        E+INMTPIH+LQTQLDNLL
Subjt:  ESINMTPIHVLQTQLDNLL

A0A6J1DY07 Component of oligomeric Golgi complex 35.6e-4486.55Show/hide
Query:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ
        VTAVKVALSS NQN+    VLEKPLR+QAFAT DKVAELVQKVNTAIQQQLPMVM KMKLYLQNPTTR+ILFNPIKVNIVEAH+QVQNLLKAEYSSEE+Q
Subjt:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ

Query:  ESINMTPIHVLQTQLDNLL
         +I MTPIHVLQ+QLDNLL
Subjt:  ESINMTPIHVLQTQLDNLL

A0A6J1FRH7 Component of oligomeric Golgi complex 33.5e-4688.24Show/hide
Query:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ
        VTAVKVA  SG+QNQKLES+LEKPLRDQAFATP+KV ELVQKVN AIQQQLP+VM KMKLYLQNPTTR+ILFNPIKVNIVEAHLQVQNLLKAEYSSEE++
Subjt:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ

Query:  ESINMTPIHVLQTQLDNLL
        E+INMTPIHVLQTQLD LL
Subjt:  ESINMTPIHVLQTQLDNLL

A0A6J1I362 Component of oligomeric Golgi complex 31.9e-4789.92Show/hide
Query:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ
        VTAVKVA  SG+QNQKLES+LEKPLRDQAFATP+KV ELVQKVN AIQQQLPMVM KMKLYLQNPTTR+ILFNPIKVNIVEAHLQVQNLLKAEYSSEE+Q
Subjt:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ

Query:  ESINMTPIHVLQTQLDNLL
        E+INMTPIHVLQT LDNLL
Subjt:  ESINMTPIHVLQTQLDNLL

SwissProt top hitse value%identityAlignment
F4HQ84 Conserved oligomeric Golgi complex subunit 39.9e-3872.27Show/hide
Query:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ
        VTA+KVALSSG QN K++SV+ KPL++QAFATPDKV ELVQKV  AIQQ+L  ++AKMKLYLQNP+TR ILF PIK NIVEAH QV++LLKAEYS+EE Q
Subjt:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ

Query:  ESINMTPIHVLQTQLDNLL
         +INM  I  LQTQLDN L
Subjt:  ESINMTPIHVLQTQLDNLL

Q29N70 Conserved oligomeric Golgi complex subunit 33.8e-0531.58Show/hide
Query:  LRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAE-YSSEEM
        LR   +A+P +++ ++Q+    I+ +L ++   M+LYL N  T  I+F PI+ NI+++ ++++ LL    YS+++M
Subjt:  LRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAE-YSSEEM

Q54TT4 Conserved oligomeric Golgi complex subunit 36.9e-0729.41Show/hide
Query:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ
        +T + V L+  N+NQ    +L +    Q+FA P ++ E++++V       LP V+ +MKLYL + +T+++L  PI+ NI+++  Q+    K  Y+    +
Subjt:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ

Query:  ESINMTPIHVLQTQLDNLL
        + I +  +  L+  LD +L
Subjt:  ESINMTPIHVLQTQLDNLL

Q8CI04 Conserved oligomeric Golgi complex subunit 36.9e-0736Show/hide
Query:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ
        V+A+K   S G     L          Q +A P KV +LV      I+ +LP+ +  M LYL N  T  ILF P++ NI +   +   LLK E+SSE++Q
Subjt:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ

Q961G1 Conserved oligomeric Golgi complex subunit 32.9e-0531.58Show/hide
Query:  LRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAE-YSSEEM
        LR   +A+P +++ ++Q+    I+ +L ++   M+LYL N  T  I+F PI+ NI+++ ++++ LL    YS+++M
Subjt:  LRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAE-YSSEEM

Arabidopsis top hitse value%identityAlignment
AT1G73430.1 sec34-like family protein7.0e-3972.27Show/hide
Query:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ
        VTA+KVALSSG QN K++SV+ KPL++QAFATPDKV ELVQKV  AIQQ+L  ++AKMKLYLQNP+TR ILF PIK NIVEAH QV++LLKAEYS+EE Q
Subjt:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ

Query:  ESINMTPIHVLQTQLDNLL
         +INM  I  LQTQLDN L
Subjt:  ESINMTPIHVLQTQLDNLL

AT1G73430.2 sec34-like family protein7.0e-3972.27Show/hide
Query:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ
        VTA+KVALSSG QN K++SV+ KPL++QAFATPDKV ELVQKV  AIQQ+L  ++AKMKLYLQNP+TR ILF PIK NIVEAH QV++LLKAEYS+EE Q
Subjt:  VTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYLQNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQ

Query:  ESINMTPIHVLQTQLDNLL
         +INM  I  LQTQLDN L
Subjt:  ESINMTPIHVLQTQLDNLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGAATCTCCCACTCCCAATTTGTTGACTACTCCCTTTGGAGTTGGCGCTTTAGTGTCTTTGGGTTACTGTGGTGCCTTTCTGGAAGGGTTATCCATTATTCAACA
AAATTTCTTCAAGATTTGGATTACATCAGATTATGTGACTGCTGTCAAAGTGGCGTTATCTTCAGGCAATCAGAACCAAAAGTTAGAATCGGTCTTGGAGAAGCCACTAA
GGGATCAGGCTTTTGCCACTCCCGATAAGGTTGCCGAATTAGTTCAAAAGGTTAATACTGCTATTCAGCAACAGCTGCCTATGGTTATGGCAAAAATGAAACTTTATCTG
CAGAACCCTACCACAAGGGTGATTCTTTTCAATCCTATAAAAGTAAACATCGTGGAAGCTCATCTACAAGTACAAAATCTGCTCAAGGCAGAGTACTCTTCTGAAGAGAT
GCAAGAATCAATCAATATGACTCCCATACATGTTTTGCAAACTCAACTTGATAATCTCCTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGAATCTCCCACTCCCAATTTGTTGACTACTCCCTTTGGAGTTGGCGCTTTAGTGTCTTTGGGTTACTGTGGTGCCTTTCTGGAAGGGTTATCCATTATTCAACA
AAATTTCTTCAAGATTTGGATTACATCAGATTATGTGACTGCTGTCAAAGTGGCGTTATCTTCAGGCAATCAGAACCAAAAGTTAGAATCGGTCTTGGAGAAGCCACTAA
GGGATCAGGCTTTTGCCACTCCCGATAAGGTTGCCGAATTAGTTCAAAAGGTTAATACTGCTATTCAGCAACAGCTGCCTATGGTTATGGCAAAAATGAAACTTTATCTG
CAGAACCCTACCACAAGGGTGATTCTTTTCAATCCTATAAAAGTAAACATCGTGGAAGCTCATCTACAAGTACAAAATCTGCTCAAGGCAGAGTACTCTTCTGAAGAGAT
GCAAGAATCAATCAATATGACTCCCATACATGTTTTGCAAACTCAACTTGATAATCTCCTGTAG
Protein sequenceShow/hide protein sequence
MFESPTPNLLTTPFGVGALVSLGYCGAFLEGLSIIQQNFFKIWITSDYVTAVKVALSSGNQNQKLESVLEKPLRDQAFATPDKVAELVQKVNTAIQQQLPMVMAKMKLYL
QNPTTRVILFNPIKVNIVEAHLQVQNLLKAEYSSEEMQESINMTPIHVLQTQLDNLL