; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006627 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006627
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRibonuclease H
Genome locationscaffold7:48361115..48364131
RNA-Seq ExpressionSpg006627
SyntenySpg006627
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010087579.1 uncharacterized protein LOC21404928 [Morus notabilis]1.3e-1048.72Show/hide
Query:  HKAERSQRLGSTEKLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDRSKRPPQDRGKGGQ
        ++  R   L   E +RSDP RRN+NKYC FHGD GH T +C   +DEI+ +IREG L++F    ++KR P + G GGQ
Subjt:  HKAERSQRLGSTEKLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDRSKRPPQDRGKGGQ

XP_022874247.1 uncharacterized protein LOC111393077 [Olea europaea var. sylvestris]7.6e-1152.86Show/hide
Query:  KLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDRSKRPPQDRGKGGQTLRSR
        +LRS P+ R++NKYC +H DHGHTT++CI L+ EIEALI+ G+LKE++ +D  KRP  D   G  T   R
Subjt:  KLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDRSKRPPQDRGKGGQTLRSR

XP_023927177.1 uncharacterized protein LOC112038586 [Quercus suber]7.6e-1155Show/hide
Query:  KLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDRSKRPPQDR
        KL+ DP RR+R+KYC FH DHGH T +C  L+ +IEALIR+G L++FV  +R+  PPQ++
Subjt:  KLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDRSKRPPQDR

XP_030924801.1 uncharacterized protein LOC115951796 [Quercus lobata]9.9e-1161.11Show/hide
Query:  EKLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDRS
        EK++ DP++RN+NKYC FH DHGH T EC  L+ +IE LIR+G LK FVG DR+
Subjt:  EKLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDRS

XP_030955724.1 uncharacterized protein LOC115977839 [Quercus lobata]9.9e-1161.11Show/hide
Query:  EKLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDRS
        EK++ DP++RN+NKYC FH DHGH T EC  L+ +IE LIR+G LK FVG DR+
Subjt:  EKLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDRS

TrEMBL top hitse value%identityAlignment
A0A2N9EPN7 Ribonuclease H4.0e-1052.63Show/hide
Query:  KLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDRSK-----RPP-QDRGKGGQTLRSR
        KLRSDP RR+++ YC FH DHGHTT +C  L+ +IEA+IR+G L +FV  D+ K     RPP QD  K  Q  R R
Subjt:  KLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDRSK-----RPP-QDRGKGGQTLRSR

A0A2N9F6A1 Ribonuclease H4.0e-1048.39Show/hide
Query:  KLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDRSKRPPQDRGK
        K+RSDP+ R +N YC FH DHGH T +C+ L++++E LIR+G L+++V   R  +PP  RG+
Subjt:  KLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDRSKRPPQDRGK

A0A2N9FT45 Ribonuclease H9.0e-1044.57Show/hide
Query:  PRSHKAERSQRLGSTEKLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDRSK-----RPP-QDRGKGGQTLRSR
        P   + + S+ +    KLRSDP +R+++ YC FH DHGHTT +C  L+ +IEALIR+G L +FV  D+ +     RPP QD  K  Q  R R
Subjt:  PRSHKAERSQRLGSTEKLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDRSK-----RPP-QDRGKGGQTLRSR

A0A2N9IUL6 Uncharacterized protein1.1e-1052.63Show/hide
Query:  KLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDR-----SKRPP-QDRGKGGQTLRSR
        KLRSDP++R++N YC FH DHGHTT +C  L+++IEALIR+G L +FV  D+       RPP QD  K  Q  R R
Subjt:  KLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDR-----SKRPP-QDRGKGGQTLRSR

W9QNA6 Uncharacterized protein6.2e-1148.72Show/hide
Query:  HKAERSQRLGSTEKLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDRSKRPPQDRGKGGQ
        ++  R   L   E +RSDP RRN+NKYC FHGD GH T +C   +DEI+ +IREG L++F    ++KR P + G GGQ
Subjt:  HKAERSQRLGSTEKLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDRSKRPPQDRGKGGQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGGCCTCGGCCCAAGGGCGAGGCCGAGGATCATGGTCGGCCTCGGCCCAATACCGAGGCCGACCCAGGCCAAGGGCCCGAGGGCTTCCCTGGTGGTGACTGGGAG
CCCGGCAGCAGTGGAAACCCTAAGGGGAGCCTATAAAAGGAAAGGCCACACGCATGACTCAGCGTTTGCTCGTCTTGCAGGTCACGTTTTGGCGCCGTCTGTGGGGAAGA
CGCGGACTAGCAAACGCAGGGTTCGGCAGGAAAACGTAGCAGCAATGGAACACCAAGGTCAACCAGCGACTGACGAACCGAATCCCCAAGTTCGACTCCAAGCCCAGGAA
ATCGAGATCGCAGCGATCAAGGGAAGGATGAACGAGATGGGGCAAAATTTGACTGAAATCCTCAGTCTGTTGAAGAAATCCGAGTCTATGAGGCCCGAGGAAGAGCATGT
ACGCAGAGACCCTAAGAAGGGTAAAGGGATAGCGGATGAGGAGGTTGGAGATTCGGAGAGTGTAACTAGCCGAATGCCTCCTCCCGGGGACGAACAGACCGAAAAGGAAG
CTGGACCAAGCCGCAAAAAGACCCGCAGGAGTTCTCCGCAAAGGGCAGCACCAGGGGCAAGAGGCACCCAGCCGAGGGGCGAGGCCGGAGTCGGTTTGAGCACTCCTCGG
TCAATGGCCGAGGCCGACCAGATGCCAAGGAGCCACAAGGCTGAGCGGAGCCAAAGGCTCGGTTCGACAGAGAAGTTAAGATCAGACCCCGACAGGAGGAACAGAAACAA
ATACTGCATGTTCCACGGAGACCACGGACACACGACCCGAGAATGCATACAATTGAGAGACGAGATAGAAGCCCTAATCCGAGAAGGTTACCTCAAGGAGTTCGTGGGGA
ATGACAGAAGCAAGAGGCCACCGCAGGATCGGGGTAAGGGGGGGCAAACCCTCCGCTCGAGATACGAACAATTTTGGGAGGGCCATCCGGAGGAGAGTCGGGTAGAAAGC
GAAAGACAGCAATCCGAGAGGCACACCAGGAGCTCGGAGGGCAAGGTAAAAGCAACGTCAGCCTCGGGAGATGACCGAGGCCGAGCATTTGAGGGATCAAGCTATCCCCA
CTCAATGGAGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTCGGCCTCGGCCCAAGGGCGAGGCCGAGGATCATGGTCGGCCTCGGCCCAATACCGAGGCCGACCCAGGCCAAGGGCCCGAGGGCTTCCCTGGTGGTGACTGGGAG
CCCGGCAGCAGTGGAAACCCTAAGGGGAGCCTATAAAAGGAAAGGCCACACGCATGACTCAGCGTTTGCTCGTCTTGCAGGTCACGTTTTGGCGCCGTCTGTGGGGAAGA
CGCGGACTAGCAAACGCAGGGTTCGGCAGGAAAACGTAGCAGCAATGGAACACCAAGGTCAACCAGCGACTGACGAACCGAATCCCCAAGTTCGACTCCAAGCCCAGGAA
ATCGAGATCGCAGCGATCAAGGGAAGGATGAACGAGATGGGGCAAAATTTGACTGAAATCCTCAGTCTGTTGAAGAAATCCGAGTCTATGAGGCCCGAGGAAGAGCATGT
ACGCAGAGACCCTAAGAAGGGTAAAGGGATAGCGGATGAGGAGGTTGGAGATTCGGAGAGTGTAACTAGCCGAATGCCTCCTCCCGGGGACGAACAGACCGAAAAGGAAG
CTGGACCAAGCCGCAAAAAGACCCGCAGGAGTTCTCCGCAAAGGGCAGCACCAGGGGCAAGAGGCACCCAGCCGAGGGGCGAGGCCGGAGTCGGTTTGAGCACTCCTCGG
TCAATGGCCGAGGCCGACCAGATGCCAAGGAGCCACAAGGCTGAGCGGAGCCAAAGGCTCGGTTCGACAGAGAAGTTAAGATCAGACCCCGACAGGAGGAACAGAAACAA
ATACTGCATGTTCCACGGAGACCACGGACACACGACCCGAGAATGCATACAATTGAGAGACGAGATAGAAGCCCTAATCCGAGAAGGTTACCTCAAGGAGTTCGTGGGGA
ATGACAGAAGCAAGAGGCCACCGCAGGATCGGGGTAAGGGGGGGCAAACCCTCCGCTCGAGATACGAACAATTTTGGGAGGGCCATCCGGAGGAGAGTCGGGTAGAAAGC
GAAAGACAGCAATCCGAGAGGCACACCAGGAGCTCGGAGGGCAAGGTAAAAGCAACGTCAGCCTCGGGAGATGACCGAGGCCGAGCATTTGAGGGATCAAGCTATCCCCA
CTCAATGGAGCATTGA
Protein sequenceShow/hide protein sequence
MLGLGPRARPRIMVGLGPIPRPTQAKGPRASLVVTGSPAAVETLRGAYKRKGHTHDSAFARLAGHVLAPSVGKTRTSKRRVRQENVAAMEHQGQPATDEPNPQVRLQAQE
IEIAAIKGRMNEMGQNLTEILSLLKKSESMRPEEEHVRRDPKKGKGIADEEVGDSESVTSRMPPPGDEQTEKEAGPSRKKTRRSSPQRAAPGARGTQPRGEAGVGLSTPR
SMAEADQMPRSHKAERSQRLGSTEKLRSDPDRRNRNKYCMFHGDHGHTTRECIQLRDEIEALIREGYLKEFVGNDRSKRPPQDRGKGGQTLRSRYEQFWEGHPEESRVES
ERQQSERHTRSSEGKVKATSASGDDRGRAFEGSSYPHSMEH