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Spg006628 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006628
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionComponent of oligomeric Golgi complex 3
Genome locationscaffold7:47890670..47892469
RNA-Seq ExpressionSpg006628
SyntenySpg006628
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0006891 - intra-Golgi vesicle-mediated transport (biological process)
GO:0007030 - Golgi organization (biological process)
GO:0005801 - cis-Golgi network (cellular component)
GO:0016020 - membrane (cellular component)
GO:0017119 - Golgi transport complex (cellular component)
InterPro domainsIPR007265 - Conserved oligomeric Golgi complex, subunit 3


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596156.1 Conserved oligomeric Golgi complex subunit 3, partial [Cucurbita argyrosperma subsp. sororia]4.0e-4694.29Show/hide
Query:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSEN
        STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQ GESLVGLRPTLQRILADVHERLTFRARTHIRDEIAN+FPS+EDLEYPEKLEKTA ELSEN
Subjt:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSEN

Query:  TSVNL
        TSV +
Subjt:  TSVNL

KAG7027701.1 Conserved oligomeric Golgi complex subunit 3 [Cucurbita argyrosperma subsp. argyrosperma]4.0e-4694.29Show/hide
Query:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSEN
        STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQ GESLVGLRPTLQRILADVHERLTFRARTHIRDEIAN+FPS+EDLEYPEKLEKTA ELSEN
Subjt:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSEN

Query:  TSVNL
        TSV +
Subjt:  TSVNL

XP_022940755.1 conserved oligomeric Golgi complex subunit 3 [Cucurbita moschata]4.0e-4694.29Show/hide
Query:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSEN
        STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQ GESLVGLRPTLQRILADVHERLTFRARTHIRDEIAN+FPS+EDLEYPEKLEKTA ELSEN
Subjt:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSEN

Query:  TSVNL
        TSV +
Subjt:  TSVNL

XP_023539647.1 conserved oligomeric Golgi complex subunit 3 [Cucurbita pepo subsp. pepo]4.0e-4694.29Show/hide
Query:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSEN
        STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQ GESLVGLRPTLQRILADVHERLTFRARTHIRDEIAN+FPS+EDLEYPEKLEKTA ELSEN
Subjt:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSEN

Query:  TSVNL
        TSV +
Subjt:  TSVNL

XP_038892000.1 conserved oligomeric Golgi complex subunit 3 [Benincasa hispida]2.3e-4693.33Show/hide
Query:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSEN
        STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQL QQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIAN+FPSDEDLEYPEKLEKTAVE++EN
Subjt:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSEN

Query:  TSVNL
        +SV +
Subjt:  TSVNL

TrEMBL top hitse value%identityAlignment
A0A1S3CCR3 Component of oligomeric Golgi complex 32.1e-4591.43Show/hide
Query:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSEN
        STYLYDTLRPR+VHETSLDFLCELVDILKVEVLGEQL QQ ESLVGLRPTL+RILADVHERLTFRARTHIRDEIAN+FPSDEDLEYPEKLE+TAVEL+EN
Subjt:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSEN

Query:  TSVNL
        TSV +
Subjt:  TSVNL

A0A5A7UE42 Component of oligomeric Golgi complex 32.1e-4591.43Show/hide
Query:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSEN
        STYLYDTLRPR+VHETSLDFLCELVDILKVEVLGEQL QQ ESLVGLRPTL+RILADVHERLTFRARTHIRDEIAN+FPSDEDLEYPEKLE+TAVEL+EN
Subjt:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSEN

Query:  TSVNL
        TSV +
Subjt:  TSVNL

A0A5D3CUT0 Component of oligomeric Golgi complex 32.1e-4591.43Show/hide
Query:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSEN
        STYLYDTLRPR+VHETSLDFLCELVDILKVEVLGEQL QQ ESLVGLRPTL+RILADVHERLTFRARTHIRDEIAN+FPSDEDLEYPEKLE+TAVEL+EN
Subjt:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSEN

Query:  TSVNL
        TSV +
Subjt:  TSVNL

A0A6J1FRH7 Component of oligomeric Golgi complex 31.9e-4694.29Show/hide
Query:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSEN
        STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQ GESLVGLRPTLQRILADVHERLTFRARTHIRDEIAN+FPS+EDLEYPEKLEKTA ELSEN
Subjt:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSEN

Query:  TSVNL
        TSV +
Subjt:  TSVNL

A0A6J1I362 Component of oligomeric Golgi complex 39.6e-4693.33Show/hide
Query:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSEN
        STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQ GESLVGLRPTLQRILADVHERLTFRARTHIRDEIAN+ PS+EDLEYPEKLEKTA ELSEN
Subjt:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSEN

Query:  TSVNL
        TSV +
Subjt:  TSVNL

SwissProt top hitse value%identityAlignment
F4HQ84 Conserved oligomeric Golgi complex subunit 31.8e-3372.73Show/hide
Query:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSE
        STYLYD LRP+L+HE ++D LCELV ILKVEVLG+Q  +Q E L GLRPTLQRILADV+ERLTFRART+IRDEIAN+ PSDEDL+YP KLE +    SE
Subjt:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSE

Q16ZN9 Conserved oligomeric Golgi complex subunit 32.5e-1444.12Show/hide
Query:  TYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKL---EKTAVELS
        T LYDTLRP ++    L+ L E+  IL+VE+L E +T   ESL      + ++L DV ER+ FRA+ ++  +I N+ PS  DL YPEKL   E  A+ L 
Subjt:  TYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKL---EKTAVELS

Query:  EN
        EN
Subjt:  EN

Q29N70 Conserved oligomeric Golgi complex subunit 31.1e-1443.69Show/hide
Query:  TYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKL---EKTAVELS
        T LYDTLRP ++H   L+ L E+  IL++E+L E + Q   +L        ++L DV ERL FRA  +++ +I NF PS  DL YPEKL   E  A+ L 
Subjt:  TYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKL---EKTAVELS

Query:  ENT
        E T
Subjt:  ENT

Q54TT4 Conserved oligomeric Golgi complex subunit 37.1e-1437.84Show/hide
Query:  WSTYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKL------EKT
        +S  LYDT+RP  +H  S + LC L  +++ E++ + + +  +   G + T++R+L D+ ERL F  +T+IRDEI ++ P+ +DL+YP KL      E T
Subjt:  WSTYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKL------EKT

Query:  AVELSENTSVN
        AV+   N S N
Subjt:  AVELSENTSVN

Q961G1 Conserved oligomeric Golgi complex subunit 35.5e-1444.44Show/hide
Query:  TYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLE
        T LYDT+RP ++H   L+ L E+  IL++E+L E + Q   +L        ++L DV ERL FRA  +++ +I NF PS  DL YPEKLE
Subjt:  TYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLE

Arabidopsis top hitse value%identityAlignment
AT1G73430.1 sec34-like family protein1.3e-3472.73Show/hide
Query:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSE
        STYLYD LRP+L+HE ++D LCELV ILKVEVLG+Q  +Q E L GLRPTLQRILADV+ERLTFRART+IRDEIAN+ PSDEDL+YP KLE +    SE
Subjt:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSE

AT1G73430.2 sec34-like family protein1.3e-3472.73Show/hide
Query:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSE
        STYLYD LRP+L+HE ++D LCELV ILKVEVLG+Q  +Q E L GLRPTLQRILADV+ERLTFRART+IRDEIAN+ PSDEDL+YP KLE +    SE
Subjt:  STYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRDEIANFFPSDEDLEYPEKLEKTAVELSE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAACACTGTAATATCGGGCCCAAAGGAACACATTTTCATAAGGTTTTACTGCTTTCTTTTGAAATAAACTTACCACATAATGACCACTCTTCTCCCTACATTGATGT
CTCGGATTGTGAATCTGATGTTAGTGTTAGTAGCATGGATCTTGATTTTCAGCATCATAGCAGCCATTCTGAAGAAGATATGATTGGAGATTCTGTTCTTGATGACTTAA
TTTTCCAAACACCTATCAAGTCTAACTGCTACATTTATAAGGTTTTAGATGAAATTCAATCATCAAGTAGTAATGTTTTGACATCGGATAAATTTTCCTCTTTAATCAAG
GTGTTTGTGGTGTTGTTTGGATTGGTTGTTTTCTTGATTATGATTTTCGAGGCAATAGGTTTAGTCATATCTGCTTTTTTGCTGTTGTGGGAGTTCCAGTTGCTTCTAGT
TTGGTCTACGTACCTGTATGATACATTGCGTCCTAGACTTGTTCATGAAACAAGTTTAGACTTTTTGTGTGAACTAGTAGATATTCTTAAAGTTGAAGTTTTGGGAGAAC
AACTCACTCAACAGGGAGAATCGTTAGTTGGATTACGTCCTACACTTCAAAGGATTCTAGCTGATGTTCATGAACGACTAACATTTCGTGCTCGAACACACATTCGTGAT
GAGATTGCAAATTTTTTTCCTTCCGATGAAGACTTGGAGTATCCAGAAAAGCTTGAGAAAACTGCAGTGGAATTGTCAGAAAATACTTCTGTAAATCTTTTTACCCTATA
CTTGAACACCTTTGTCTTGTATACTTGCGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAACACTGTAATATCGGGCCCAAAGGAACACATTTTCATAAGGTTTTACTGCTTTCTTTTGAAATAAACTTACCACATAATGACCACTCTTCTCCCTACATTGATGT
CTCGGATTGTGAATCTGATGTTAGTGTTAGTAGCATGGATCTTGATTTTCAGCATCATAGCAGCCATTCTGAAGAAGATATGATTGGAGATTCTGTTCTTGATGACTTAA
TTTTCCAAACACCTATCAAGTCTAACTGCTACATTTATAAGGTTTTAGATGAAATTCAATCATCAAGTAGTAATGTTTTGACATCGGATAAATTTTCCTCTTTAATCAAG
GTGTTTGTGGTGTTGTTTGGATTGGTTGTTTTCTTGATTATGATTTTCGAGGCAATAGGTTTAGTCATATCTGCTTTTTTGCTGTTGTGGGAGTTCCAGTTGCTTCTAGT
TTGGTCTACGTACCTGTATGATACATTGCGTCCTAGACTTGTTCATGAAACAAGTTTAGACTTTTTGTGTGAACTAGTAGATATTCTTAAAGTTGAAGTTTTGGGAGAAC
AACTCACTCAACAGGGAGAATCGTTAGTTGGATTACGTCCTACACTTCAAAGGATTCTAGCTGATGTTCATGAACGACTAACATTTCGTGCTCGAACACACATTCGTGAT
GAGATTGCAAATTTTTTTCCTTCCGATGAAGACTTGGAGTATCCAGAAAAGCTTGAGAAAACTGCAGTGGAATTGTCAGAAAATACTTCTGTAAATCTTTTTACCCTATA
CTTGAACACCTTTGTCTTGTATACTTGCGTTTAA
Protein sequenceShow/hide protein sequence
MEHCNIGPKGTHFHKVLLLSFEINLPHNDHSSPYIDVSDCESDVSVSSMDLDFQHHSSHSEEDMIGDSVLDDLIFQTPIKSNCYIYKVLDEIQSSSSNVLTSDKFSSLIK
VFVVLFGLVVFLIMIFEAIGLVISAFLLLWEFQLLLVWSTYLYDTLRPRLVHETSLDFLCELVDILKVEVLGEQLTQQGESLVGLRPTLQRILADVHERLTFRARTHIRD
EIANFFPSDEDLEYPEKLEKTAVELSENTSVNLFTLYLNTFVLYTCV