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Spg006638 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006638
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA-directed RNA polymerase V subunit 5C-like
Genome locationscaffold7:47749263..47751188
RNA-Seq ExpressionSpg006638
SyntenySpg006638
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]8.2e-2131.63Show/hide
Query:  PHFLRTGIADHGWELFCAKPES-----------------------VNARCP---NAINALYNLQNFPHAVYNEMAVAPSNEQLSDAVREVGIEGARWQLS
        P F+   I  HGW  FC  P +                        N + P    AIN+++ L+      Y + A   ++EQL   + EV IEGA WQ+S
Subjt:  PHFLRTGIADHGWELFCAKPES-----------------------VNARCP---NAINALYNLQNFPHAVYNEMAVAPSNEQLSDAVREVGIEGARWQLS

Query:  KTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEIFGC-WKKKVGKLFFPNTITMLCKRAGVLENEGDIILF
             T     LKR A  W  F+  R +P+TH  TV+++RVLL ++IL  +S+++ +I + EI  C   +K G L+FP+ IT L  +A V  ++ + I+ 
Subjt:  KTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEIFGC-WKKKVGKLFFPNTITMLCKRAGVLENEGDIILF

Query:  DKGIIDTSNLARLQR
        + G I T +++R+ +
Subjt:  DKGIIDTSNLARLQR

EXB93492.1 hypothetical protein L484_006967 [Morus notabilis]9.1e-2028.15Show/hide
Query:  RRRAEKGKSVAEASGEPNEIEEPQLSYDRFVNNFAKAKYTEL-----------LKRDFLFERGFSGDLPHFLRTGIADHGWELFCAKPESVNARCPNAIN
        + +A KGK V +   + N  E  Q + +  V  FA  +  +            ++R F++ RG     P F+ + IA H W  FC  P +   +   AIN
Subjt:  RRRAEKGKSVAEASGEPNEIEEPQLSYDRFVNNFAKAKYTEL-----------LKRDFLFERGFSGDLPHFLRTGIADHGWELFCAKPESVNARCPNAIN

Query:  ALYNLQNFPHAVYNEMAVAPSNEQLSDAVREVGIEGARWQLSKTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKI
        +LY+L +     +N  A + + +QL + + E+ +EG  W  +     TF    L+     W  F++ RL+P++H   V +ER +L + +++   ++VG++
Subjt:  ALYNLQNFPHAVYNEMAVAPSNEQLSDAVREVGIEGARWQLSKTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKI

Query:  IVNEIFGCWKKKVGKLFFPNTITMLCKRAGVLENEGDI
        I  ++  C  +K G L+FP+ IT LC   GV   E ++
Subjt:  IVNEIFGCWKKKVGKLFFPNTITMLCKRAGVLENEGDI

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]2.0e-1932.67Show/hide
Query:  RFVNNFAKAKY-TELLKRDFLFERGF-------SGDLPHFLRTGIADHGWELFCAKPES----------VNARCP----------------NAINALYNL
        +F    A+ +Y   +  R    E+GF        G LP F+   I  H W+ FCA PE            N   P                 AINA++ L
Subjt:  RFVNNFAKAKY-TELLKRDFLFERGF-------SGDLPHFLRTGIADHGWELFCAKPES----------VNARCP----------------NAINALYNL

Query:  QNFPHAVYNEMAVAPSNEQLSDAVREVGIEGARWQLSKTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEI
         + P   ++E     +   L   +  V + GA W +S     T   + L   A  W  F+K  LLPTTH  TVS++R+LL  ++L   SI+VG++I +EI
Subjt:  QNFPHAVYNEMAVAPSNEQLSDAVREVGIEGARWQLSKTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEI

Query:  FGCWKKKVGKLFFPNTITMLCK--RAGVLENEGDIILFDKGIIDTSNLARL
          C  +K G LFFP+ IT LC+  RA  L NE    L + G ID   +AR+
Subjt:  FGCWKKKVGKLFFPNTITMLCK--RAGVLENEGDIILFDKGIIDTSNLARL

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.0e-1933.07Show/hide
Query:  RFVNNFAKAKY-TELLKRDFLFERGF-------SGDLPHFLRTGIADHGWELFCAKPES----------VNARCP----------------NAINALYNL
        +F    A  +Y   +  R    E+GF        G LP F+   I  H W+ FCA PE            N   P                 AINA++ L
Subjt:  RFVNNFAKAKY-TELLKRDFLFERGF-------SGDLPHFLRTGIADHGWELFCAKPES----------VNARCP----------------NAINALYNL

Query:  QNFPHAVYNEMAVAPSNEQLSDAVREVGIEGARWQLSKTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEI
         + P   ++E     + + L   +  V   GA W +S     T   + L   A  W  F+K RLLPTTH  TVS++R+LL  ++L   SI+VG++I +EI
Subjt:  QNFPHAVYNEMAVAPSNEQLSDAVREVGIEGARWQLSKTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEI

Query:  FGCWKKKVGKLFFPNTITMLCK--RAGVLENEGDIILFDKGIIDTSNLARL
          C  +K G LFFP+ IT LC+  RA  L NE    L + G ID   +AR+
Subjt:  FGCWKKKVGKLFFPNTITMLCK--RAGVLENEGDIILFDKGIIDTSNLARL

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]7.0e-2031.6Show/hide
Query:  RFVNNFAKAKYTE-------LLKRDFLFERGFSGDLPHFLRTGIADHGWELFCAKPES----------VNARCPN----------------AINALYNLQ
        +F +  A+ +Y E        ++++F+++     + P F+   I  H W+LFCA PE            N   P+                AIN +++L 
Subjt:  RFVNNFAKAKYTE-------LLKRDFLFERGFSGDLPHFLRTGIADHGWELFCAKPES----------VNARCPN----------------AINALYNLQ

Query:  NFPHAVYNEMAVAPSNEQLSDAVREVGIEGARWQLSKTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEIF
        + P   ++E     +  +L   +  V I GA W +S     T   + L   A  W  F+K RLLPTTH  TVS+E V L +++L   SI+VG++I  EI 
Subjt:  NFPHAVYNEMAVAPSNEQLSDAVREVGIEGARWQLSKTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEIF

Query:  GCWKKKVGKLFFPNTITMLCK--RAGVLENE
         C  +K G LFFP+ IT +C+  RA  L NE
Subjt:  GCWKKKVGKLFFPNTITMLCK--RAGVLENE

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)9.8e-2032.67Show/hide
Query:  RFVNNFAKAKY-TELLKRDFLFERGF-------SGDLPHFLRTGIADHGWELFCAKPES----------VNARCP----------------NAINALYNL
        +F    A+ +Y   +  R    E+GF        G LP F+   I  H W+ FCA PE            N   P                 AINA++ L
Subjt:  RFVNNFAKAKY-TELLKRDFLFERGF-------SGDLPHFLRTGIADHGWELFCAKPES----------VNARCP----------------NAINALYNL

Query:  QNFPHAVYNEMAVAPSNEQLSDAVREVGIEGARWQLSKTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEI
         + P   ++E     +   L   +  V + GA W +S     T   + L   A  W  F+K  LLPTTH  TVS++R+LL  ++L   SI+VG++I +EI
Subjt:  QNFPHAVYNEMAVAPSNEQLSDAVREVGIEGARWQLSKTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEI

Query:  FGCWKKKVGKLFFPNTITMLCK--RAGVLENEGDIILFDKGIIDTSNLARL
          C  +K G LFFP+ IT LC+  RA  L NE    L + G ID   +AR+
Subjt:  FGCWKKKVGKLFFPNTITMLCK--RAGVLENEGDIILFDKGIIDTSNLARL

A0A2P5DAQ2 Uncharacterized protein3.4e-2031.6Show/hide
Query:  RFVNNFAKAKYTE-------LLKRDFLFERGFSGDLPHFLRTGIADHGWELFCAKPES----------VNARCPN----------------AINALYNLQ
        +F +  A+ +Y E        ++++F+++     + P F+   I  H W+LFCA PE            N   P+                AIN +++L 
Subjt:  RFVNNFAKAKYTE-------LLKRDFLFERGFSGDLPHFLRTGIADHGWELFCAKPES----------VNARCPN----------------AINALYNLQ

Query:  NFPHAVYNEMAVAPSNEQLSDAVREVGIEGARWQLSKTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEIF
        + P   ++E     +  +L   +  V I GA W +S     T   + L   A  W  F+K RLLPTTH  TVS+E V L +++L   SI+VG++I  EI 
Subjt:  NFPHAVYNEMAVAPSNEQLSDAVREVGIEGARWQLSKTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEIF

Query:  GCWKKKVGKLFFPNTITMLCK--RAGVLENE
         C  +K G LFFP+ IT +C+  RA  L NE
Subjt:  GCWKKKVGKLFFPNTITMLCK--RAGVLENE

A0A6A3BU96 Uncharacterized protein4.9e-1930.13Show/hide
Query:  LSYDRFVNNFAKAKYTELLKRDFLFERGF------SGDLPHFLRTGIADHGWELFCAKPESVNARC----------PN----------------AINALY
        +++ +F N+ AKA++     R+  FE GF       G     +   +    W  F   P SVNA            PN                AIN  +
Subjt:  LSYDRFVNNFAKAKYTELLKRDFLFERGF------SGDLPHFLRTGIADHGWELFCAKPESVNARC----------PN----------------AINALY

Query:  NLQNF--PHAVYNEMAVAPSNEQLSDAVREVGIEGARWQLSKTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKII
        +LQ     HA++ E A    + +    + ++  E   W   +T + +     L+  A  W  F+K +L+PT+H++TVS  R+LL  +++ S  IDVG+II
Subjt:  NLQNF--PHAVYNEMAVAPSNEQLSDAVREVGIEGARWQLSKTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKII

Query:  VNEIFGCWKKKVGKLFFPNTITMLCKRAGVLENEGDIIL
        V ++  C  KK   L FPN IT LC++  V EN  D IL
Subjt:  VNEIFGCWKKKVGKLFFPNTITMLCKRAGVLENEGDIIL

W9QTD9 Uncharacterized protein4.0e-2131.63Show/hide
Query:  PHFLRTGIADHGWELFCAKPES-----------------------VNARCP---NAINALYNLQNFPHAVYNEMAVAPSNEQLSDAVREVGIEGARWQLS
        P F+   I  HGW  FC  P +                        N + P    AIN+++ L+      Y + A   ++EQL   + EV IEGA WQ+S
Subjt:  PHFLRTGIADHGWELFCAKPES-----------------------VNARCP---NAINALYNLQNFPHAVYNEMAVAPSNEQLSDAVREVGIEGARWQLS

Query:  KTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEIFGC-WKKKVGKLFFPNTITMLCKRAGVLENEGDIILF
             T     LKR A  W  F+  R +P+TH  TV+++RVLL ++IL  +S+++ +I + EI  C   +K G L+FP+ IT L  +A V  ++ + I+ 
Subjt:  KTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEIFGC-WKKKVGKLFFPNTITMLCKRAGVLENEGDIILF

Query:  DKGIIDTSNLARLQR
        + G I T +++R+ +
Subjt:  DKGIIDTSNLARLQR

W9S7D3 Uncharacterized protein4.4e-2028.15Show/hide
Query:  RRRAEKGKSVAEASGEPNEIEEPQLSYDRFVNNFAKAKYTEL-----------LKRDFLFERGFSGDLPHFLRTGIADHGWELFCAKPESVNARCPNAIN
        + +A KGK V +   + N  E  Q + +  V  FA  +  +            ++R F++ RG     P F+ + IA H W  FC  P +   +   AIN
Subjt:  RRRAEKGKSVAEASGEPNEIEEPQLSYDRFVNNFAKAKYTEL-----------LKRDFLFERGFSGDLPHFLRTGIADHGWELFCAKPESVNARCPNAIN

Query:  ALYNLQNFPHAVYNEMAVAPSNEQLSDAVREVGIEGARWQLSKTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKI
        +LY+L +     +N  A + + +QL + + E+ +EG  W  +     TF    L+     W  F++ RL+P++H   V +ER +L + +++   ++VG++
Subjt:  ALYNLQNFPHAVYNEMAVAPSNEQLSDAVREVGIEGARWQLSKTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKI

Query:  IVNEIFGCWKKKVGKLFFPNTITMLCKRAGVLENEGDI
        I  ++  C  +K G L+FP+ IT LC   GV   E ++
Subjt:  IVNEIFGCWKKKVGKLFFPNTITMLCKRAGVLENEGDI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTTTATGGCCGAAGCAAATCTCTCGTCTGAGTAAAGAGGGTTCTATGTCTTCAATGGCTAAAACGAGAGCAAGAAAAGAGAGGGAGAATGAGGAGGAAGAGGT
ACCTGTTACCCCCGAAGCACCGAAAGTTAAAACGAAGAAGAAGAAAACACCAGAAGAAAAAGAGGATAAGAGGAGAAGAAGACAGCAGAGGGCTGAAGATCAAGAAGCTG
TTCAGAAACCGGCGGAGGATGTTATTGTGGAAGAAGATCCGAAAGAACCAGAAGGACAGAATCCAGAGCAGACTGACCCGATAGTTGCGGATACAGAGGCAGTTCGAGAA
GAAAATGCAGAAGAAGTTCAAGAAAAGCAAACTGAGAACGTGCAAGAAGAACAGGCAGAGGTTGAGCCTGAAGAGGTTAATGAGCAAGAACAGGAGGCTCGTGTGGAGGT
GATCATGCCGAAAGTGCCCAAACGTCGCCGTATAAAGCGAAAAGCGGGTCGTGTTAAGGTAGTCCGAACTGATACCCCCTCGCCTCCAACTACTGATTCTGAAAGAGAGA
ATGCAGAAAGGGAAGAGCAAGAAAAGAAAGAGGCCGAGGAAAAAGCAAGAGAAGAAGCAGAGAAAAAGGCTGAGGAAGAGCTGTTGCTCAGGCGAAGGGCGGAAAAGGGC
AAAAGTGTTGCTGAAGCATCGGGAGAACCTAATGAGATAGAAGAGCCACAGTTGTCGTATGATCGCTTCGTCAACAATTTTGCCAAAGCAAAATACACCGAGCTGCTGAA
AAGAGACTTCCTGTTTGAGAGAGGATTTAGCGGTGATCTTCCGCATTTTCTGAGGACCGGCATTGCAGATCACGGCTGGGAGTTGTTTTGTGCAAAGCCCGAGTCTGTGA
ACGCAAGGTGTCCTAATGCTATTAACGCACTGTATAACCTTCAGAATTTCCCCCACGCAGTATATAATGAGATGGCTGTGGCGCCATCTAATGAGCAGCTGAGCGATGCT
GTGCGGGAAGTGGGTATTGAAGGGGCACGGTGGCAGCTGTCAAAAACAGAGAAAAAGACGTTTCAGTCAGCCTATCTGAAGAGGGAAGCAAATACGTGGATGGGATTCAT
CAAACAGAGGCTGCTTCCAACGACTCATGACTCGACAGTTTCTAGGGAAAGGGTTCTTCTGGCTTTTGCGATTCTGCGGTCTCTCAGCATTGACGTAGGAAAGATTATTG
TTAATGAGATATTTGGATGTTGGAAGAAGAAGGTGGGGAAGCTGTTTTTCCCGAATACCATTACCATGCTTTGCAAGCGAGCAGGGGTTCTAGAGAATGAGGGAGATATT
ATTTTATTTGACAAGGGAATCATCGATACGTCTAACTTGGCACGACTTCAGCGTACGAAAGAGGCACGTCAGGGTGGGCTTGTCTATGGCATCAACACGATTTTAGAACA
ACTGGCACTTTCGGCCAGCAGGCAAGAGTTTGCCGAGAGGCAAGTTTTAACCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAACTTTATGGCCGAAGCAAATCTCTCGTCTGAGTAAAGAGGGTTCTATGTCTTCAATGGCTAAAACGAGAGCAAGAAAAGAGAGGGAGAATGAGGAGGAAGAGGT
ACCTGTTACCCCCGAAGCACCGAAAGTTAAAACGAAGAAGAAGAAAACACCAGAAGAAAAAGAGGATAAGAGGAGAAGAAGACAGCAGAGGGCTGAAGATCAAGAAGCTG
TTCAGAAACCGGCGGAGGATGTTATTGTGGAAGAAGATCCGAAAGAACCAGAAGGACAGAATCCAGAGCAGACTGACCCGATAGTTGCGGATACAGAGGCAGTTCGAGAA
GAAAATGCAGAAGAAGTTCAAGAAAAGCAAACTGAGAACGTGCAAGAAGAACAGGCAGAGGTTGAGCCTGAAGAGGTTAATGAGCAAGAACAGGAGGCTCGTGTGGAGGT
GATCATGCCGAAAGTGCCCAAACGTCGCCGTATAAAGCGAAAAGCGGGTCGTGTTAAGGTAGTCCGAACTGATACCCCCTCGCCTCCAACTACTGATTCTGAAAGAGAGA
ATGCAGAAAGGGAAGAGCAAGAAAAGAAAGAGGCCGAGGAAAAAGCAAGAGAAGAAGCAGAGAAAAAGGCTGAGGAAGAGCTGTTGCTCAGGCGAAGGGCGGAAAAGGGC
AAAAGTGTTGCTGAAGCATCGGGAGAACCTAATGAGATAGAAGAGCCACAGTTGTCGTATGATCGCTTCGTCAACAATTTTGCCAAAGCAAAATACACCGAGCTGCTGAA
AAGAGACTTCCTGTTTGAGAGAGGATTTAGCGGTGATCTTCCGCATTTTCTGAGGACCGGCATTGCAGATCACGGCTGGGAGTTGTTTTGTGCAAAGCCCGAGTCTGTGA
ACGCAAGGTGTCCTAATGCTATTAACGCACTGTATAACCTTCAGAATTTCCCCCACGCAGTATATAATGAGATGGCTGTGGCGCCATCTAATGAGCAGCTGAGCGATGCT
GTGCGGGAAGTGGGTATTGAAGGGGCACGGTGGCAGCTGTCAAAAACAGAGAAAAAGACGTTTCAGTCAGCCTATCTGAAGAGGGAAGCAAATACGTGGATGGGATTCAT
CAAACAGAGGCTGCTTCCAACGACTCATGACTCGACAGTTTCTAGGGAAAGGGTTCTTCTGGCTTTTGCGATTCTGCGGTCTCTCAGCATTGACGTAGGAAAGATTATTG
TTAATGAGATATTTGGATGTTGGAAGAAGAAGGTGGGGAAGCTGTTTTTCCCGAATACCATTACCATGCTTTGCAAGCGAGCAGGGGTTCTAGAGAATGAGGGAGATATT
ATTTTATTTGACAAGGGAATCATCGATACGTCTAACTTGGCACGACTTCAGCGTACGAAAGAGGCACGTCAGGGTGGGCTTGTCTATGGCATCAACACGATTTTAGAACA
ACTGGCACTTTCGGCCAGCAGGCAAGAGTTTGCCGAGAGGCAAGTTTTAACCTTCTAG
Protein sequenceShow/hide protein sequence
MATLWPKQISRLSKEGSMSSMAKTRARKERENEEEEVPVTPEAPKVKTKKKKTPEEKEDKRRRRQQRAEDQEAVQKPAEDVIVEEDPKEPEGQNPEQTDPIVADTEAVRE
ENAEEVQEKQTENVQEEQAEVEPEEVNEQEQEARVEVIMPKVPKRRRIKRKAGRVKVVRTDTPSPPTTDSERENAEREEQEKKEAEEKAREEAEKKAEEELLLRRRAEKG
KSVAEASGEPNEIEEPQLSYDRFVNNFAKAKYTELLKRDFLFERGFSGDLPHFLRTGIADHGWELFCAKPESVNARCPNAINALYNLQNFPHAVYNEMAVAPSNEQLSDA
VREVGIEGARWQLSKTEKKTFQSAYLKREANTWMGFIKQRLLPTTHDSTVSRERVLLAFAILRSLSIDVGKIIVNEIFGCWKKKVGKLFFPNTITMLCKRAGVLENEGDI
ILFDKGIIDTSNLARLQRTKEARQGGLVYGINTILEQLALSASRQEFAERQVLTF