; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006662 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006662
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein FAR-RED ELONGATED HYPOCOTYL 3-like
Genome locationscaffold7:46947465..46959175
RNA-Seq ExpressionSpg006662
SyntenySpg006662
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR006564 - Zinc finger, PMZ-type
IPR007527 - Zinc finger, SWIM-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022843226.1 uncharacterized protein LOC111366761 [Olea europaea var. sylvestris]1.8e-2242.51Show/hide
Query:  QIVHAKGTGSAQSIESAAALASQTQEENL--EQVQYVS--NFNSRGYNNSYTPTHYHPNNRNHENFSYANNKNVLN-PPGFTPQSQESKKSLEDLVGAFI
        QIV     G+ Q+++S  + +S  QE  +  EQVQY+   N+N RG    Y   HYHP  RNHEN SY NN+N L  PPGF  Q+ + K  LED++G FI
Subjt:  QIVHAKGTGSAQSIESAAALASQTQEENL--EQVQYVS--NFNSRGYNNSYTPTHYHPNNRNHENFSYANNKNVLN-PPGFTPQSQESKKSLEDLVGAFI

Query:  AESSNRSNKLEEAVIAINTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPAEQEKSSLEYCKAVTV
        +E+ +R NK E  +  I T V+   A +KN+E Q+GQL +++ +  KGK P++ E +  E+C A+T+
Subjt:  AESSNRSNKLEEAVIAINTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPAEQEKSSLEYCKAVTV

XP_022868727.1 uncharacterized protein LOC111388274 [Olea europaea var. sylvestris]6.7e-2240Show/hide
Query:  QIVHAKGTGSAQSIESAAALASQTQEENL--EQVQYVSNFNSRGYN--NSYTPTHYHPNNRNHENFSYANNKNVLN-PPGFTPQSQESKKSLEDLVGAFI
        QIV     G+ Q ++S  + +S  QE  +  EQ QYV   NSR YN   SY   HYHP  RNHEN SY NN+N L  PPGF  Q+ + K  LED++G FI
Subjt:  QIVHAKGTGSAQSIESAAALASQTQEENL--EQVQYVSNFNSRGYN--NSYTPTHYHPNNRNHENFSYANNKNVLN-PPGFTPQSQESKKSLEDLVGAFI

Query:  AESSNRSNKLEEAVIAINTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPAEQEKSSLEYCKAVTVHDEEKTQVAEEDETTETEELTGEANQRK
        +E+ +R NK +  +  I T V+   A +KN+E Q+GQL + + +  +GK P++ E +  E+CKAV + + +  QV E + T E+     +  ++K
Subjt:  AESSNRSNKLEEAVIAINTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPAEQEKSSLEYCKAVTVHDEEKTQVAEEDETTETEELTGEANQRK

XP_022868848.1 uncharacterized protein LOC111388394 [Olea europaea var. sylvestris]7.9e-2342.51Show/hide
Query:  QIVHAKGTGSAQSIESAAALASQTQEENL--EQVQYVS--NFNSRGYNNSYTPTHYHPNNRNHENFSYANNKNVLN-PPGFTPQSQESKKSLEDLVGAFI
        QIV     G+ Q ++S  + +S  QE  +  EQ QY+   NFN RG    Y   HYHP  RNHEN SY NN+N L  PPGF  Q+ + K  LED++G FI
Subjt:  QIVHAKGTGSAQSIESAAALASQTQEENL--EQVQYVS--NFNSRGYNNSYTPTHYHPNNRNHENFSYANNKNVLN-PPGFTPQSQESKKSLEDLVGAFI

Query:  AESSNRSNKLEEAVIAINTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPAEQEKSSLEYCKAVTV
        +E+ +R NK E  +  I T V+   A +KN+E Q+GQL + + +  KGK P++ E +  E+C A+T+
Subjt:  AESSNRSNKLEEAVIAINTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPAEQEKSSLEYCKAVTV

XP_022893883.1 uncharacterized protein LOC111408348 [Olea europaea var. sylvestris]1.1e-2140.4Show/hide
Query:  QIVHAKGTGSAQSIESAAALASQTQEENL--EQVQYVSNFNSRGYN--NSYTPTHYHPNNRNHENFSYANNKNVLN-PPGFTPQSQESKKSLEDLVGAFI
        QIV     G+ Q ++S  + +S  QE  +  EQ QYV   NSR YN   SY   HYHP  RNHEN SY NN+N L  PPGF  Q+ + K  LED++G FI
Subjt:  QIVHAKGTGSAQSIESAAALASQTQEENL--EQVQYVSNFNSRGYN--NSYTPTHYHPNNRNHENFSYANNKNVLN-PPGFTPQSQESKKSLEDLVGAFI

Query:  AESSNRSNKLEEAVIAINTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPAEQEKSSLEYCKAVTVH------------------DEEKTQVAEEDE
        +E+ +R NK E  +  I T V+   A +KN+E Q+ QL + + +  KGK P++ E +  E+CKAV +                   D+EK QV +E E
Subjt:  AESSNRSNKLEEAVIAINTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPAEQEKSSLEYCKAVTVH------------------DEEKTQVAEEDE

XP_024032903.1 uncharacterized protein LOC112095347 [Morus notabilis]3.9e-2238.78Show/hide
Query:  LGQIVHAKGTGSAQSIESAAALASQTQEENLEQVQYVSNFNSRGYNNSYTPTHYHPNNRNHENFSYANNKNVLNPP-GFTPQSQESKKSLEDLVGAFIAE
        +  + + + + S +++  A+ L +Q  E   EQVQ+V+N N   Y  +  P HYHP  RNHENFSYANN+NVL PP GF  Q  E K S+EDL+  FI E
Subjt:  LGQIVHAKGTGSAQSIESAAALASQTQEENLEQVQYVSNFNSRGYNNSYTPTHYHPNNRNHENFSYANNKNVLNPP-GFTPQSQESKKSLEDLVGAFIAE

Query:  SSNRSNKLEEAVIAINTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPAEQEKSSLEYCKAVTVHDEEKTQVAE-EDETTETEELTGEANQRKLR
        +  R NK E  +  I T  N  +A +K++E Q+GQL +VV   + GK P++ E +  ++CKA+T+   ++ +  + +++ TE EE+  E  +   R
Subjt:  SSNRSNKLEEAVIAINTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPAEQEKSSLEYCKAVTVHDEEKTQVAE-EDETTETEELTGEANQRKLR

TrEMBL top hitse value%identityAlignment
A0A2P5B1T0 Uncharacterized protein4.5e-1641.78Show/hide
Query:  NLEQVQYVS--NFNSRGYNN-SYTPTHYHPNNRNHENFSYANNKNVLNPP-GFTPQSQESKKSLEDLVGAFIAESSNRSNKLEEAVIAINTTVNGHSAAI
        +L QV Y++  NFN RG N  +  PTHYHP   NHENFSY NN+NVL PP G      E K SLED++  FI E+  R  K E  +  I    N  +A I
Subjt:  NLEQVQYVS--NFNSRGYNN-SYTPTHYHPNNRNHENFSYANNKNVLNPP-GFTPQSQESKKSLEDLVGAFIAESSNRSNKLEEAVIAINTTVNGHSAAI

Query:  KNIETQLGQLVSVVNTMNKGKAPAEQEKSSLEYCKAVTVHDEEKTQ
        K++E Q+GQL + +     GK P + E +   +CKA+T+   ++ +
Subjt:  KNIETQLGQLVSVVNTMNKGKAPAEQEKSSLEYCKAVTVHDEEKTQ

A0A2P5BPI6 Uncharacterized protein1.1e-1742.75Show/hide
Query:  SYTPTHYHPNNRNHENFSYANNKNVLN-PPGFTPQSQESKKSLEDLVGAFIAESSNRSNKLEEAVIAINTTVNGHSAAIKNIETQLGQLVSVVNTMNKGK
        S  PTHY+P  RNHENFSY N +NVL  PPGF P   E K SLEDL+  FI E+  + NK E  +  I T  N  +A +K++E Q+GQL + +     GK
Subjt:  SYTPTHYHPNNRNHENFSYANNKNVLN-PPGFTPQSQESKKSLEDLVGAFIAESSNRSNKLEEAVIAINTTVNGHSAAIKNIETQLGQLVSVVNTMNKGK

Query:  APAEQEKSSLEYCKAVTVHDEEKTQVAEEDE
         P++ E +  ++CKA+T+ + ++ +V+   E
Subjt:  APAEQEKSSLEYCKAVTVHDEEKTQVAEEDE

A0A6P9DWY0 uncharacterized protein LOC1183440261.1e-1739.51Show/hide
Query:  SAAALASQTQEENLEQVQYVSNFNSRGYNNSYTPTHYHPNNRNHENFSYANNKNVLNP-PGFTPQSQESKKSLEDLVGAFIAESSNRSNKLEEAVIAINT
        +A ++   + E + EQVQY++N N   Y  +  P +YH   RNHEN SY N KNVL P PGF  Q  E K SLED + +F+ E++ R  K +  +  I T
Subjt:  SAAALASQTQEENLEQVQYVSNFNSRGYNNSYTPTHYHPNNRNHENFSYANNKNVLNP-PGFTPQSQESKKSLEDLVGAFIAESSNRSNKLEEAVIAINT

Query:  TVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPAEQEKSSLEYCKAVTVHDEEKTQVAEEDET
          +   AAIKNIE Q+GQL + +N   +G  P+  E +  E CKA+T+    +   +  +ET
Subjt:  TVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPAEQEKSSLEYCKAVTVHDEEKTQVAEEDET

A0A6P9F5T6 uncharacterized protein LOC1089899764.9e-1837.07Show/hide
Query:  VHAKGTGSAQSIESAAALASQT---QEENLEQVQYVSNFNSRGYNNSYTPTHYHPNNRNHENFSYANNKNVLN---PPGFTPQSQESKKSLEDLVGAFIA
        V A GT  ++++E   A  S T    EE+ EQVQY++N+N   Y  +  P +Y+P  +NHEN SY N KNVL    PPGF  QS E K SLED + +F+ 
Subjt:  VHAKGTGSAQSIESAAALASQT---QEENLEQVQYVSNFNSRGYNNSYTPTHYHPNNRNHENFSYANNKNVLN---PPGFTPQSQESKKSLEDLVGAFIA

Query:  ESSNRSNKLEEAVIAINTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPAEQEKSSLEYCKAVTVHDEEKTQVAEEDETTETEELTGEANQR-KLRLRV
        E++ R  K +  +  I T  +   A IKN+E Q+GQL   +N+  +G  P+  E +  E  KA+T+    + + +   ET  T +L   A  + KL+ R 
Subjt:  ESSNRSNKLEEAVIAINTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPAEQEKSSLEYCKAVTVHDEEKTQVAEEDETTETEELTGEANQR-KLRLRV

Query:  PATDR
           +R
Subjt:  PATDR

A0A803P9R0 Uncharacterized protein1.6e-1637.76Show/hide
Query:  RLGQIVHAKGTGSAQSIESAAALASQTQEENLEQVQYVSNFNSRGYNNSY----TPTHYHPNNRNHENFSYANNKNVLN-PPGFTPQSQESKKSLEDLVG
        ++  +V  K T + +++   AA  SQ  + ++EQ QY++N     YNN+Y     P +YHP  RNHEN SY N KN+L  PPGF  Q Q  KKSLED++G
Subjt:  RLGQIVHAKGTGSAQSIESAAALASQTQEENLEQVQYVSNFNSRGYNNSY----TPTHYHPNNRNHENFSYANNKNVLN-PPGFTPQSQESKKSLEDLVG

Query:  AFIAESSNRSNKLEEAVIAINTTVNGHSAAIKNIETQLGQLVSVV-----NTMNKGKAPAEQEKSSLEYCKAVTVHDEEKTQVAEEDETTETEELT
         F+ ESS R NK E  +  I T ++   A++KNIE Q+GQL   +       ++ G+A  E E    +    V   D+E+ QV ++++  ++E+ T
Subjt:  AFIAESSNRSNKLEEAVIAINTTVNGHSAAIKNIETQLGQLVSVV-----NTMNKGKAPAEQEKSSLEYCKAVTVHDEEKTQVAEEDETTETEELT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G49920.1 MuDR family transposase3.6e-0534.85Show/hide
Query:  GSVNIHTRTCTCREFDCFKLSCSHAITACIYCNVSYLDICSPCYHVEAVLATYAEPIYPLGHVSEW
        G V ++  TCTC EF   K  C HA+  C    ++ L     CY VE    TY+    P+  +S W
Subjt:  GSVNIHTRTCTCREFDCFKLSCSHAITACIYCNVSYLDICSPCYHVEAVLATYAEPIYPLGHVSEW

AT1G64260.1 MuDR family transposase3.6e-0534.38Show/hide
Query:  VNIHTRTCTCREFDCFKLSCSHAITACIYCNVSYLDICSPCYHVEAVLATYAEPIYPLGHVSEW
        V ++  TCTCR+F  +K  C HA+       ++ L     CY VE    TYA    P+  V+ W
Subjt:  VNIHTRTCTCREFDCFKLSCSHAITACIYCNVSYLDICSPCYHVEAVLATYAEPIYPLGHVSEW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGCTCGGGAGAGGTTAGGTCAGATTGTGCATGCGAAAGGTACAGGGAGTGCTCAATCGATTGAGTCTGCAGCTGCCCTTGCATCCCAGACTCAGGAGGAAAATCT
CGAGCAGGTTCAGTATGTCTCTAATTTTAATTCTAGGGGGTACAATAATAGTTATACACCTACACATTATCACCCTAATAATAGAAATCATGAGAATTTTTCGTATGCAA
ATAATAAGAATGTTCTGAATCCTCCTGGCTTTACTCCTCAAAGTCAAGAAAGTAAAAAGTCTCTAGAGGATCTCGTTGGAGCTTTTATTGCAGAATCAAGTAATAGGTCA
AATAAGCTCGAGGAGGCCGTGATTGCCATAAACACCACTGTCAATGGTCATTCTGCAGCCATCAAGAACATAGAGACTCAGCTGGGACAACTGGTAAGTGTTGTCAACAC
CATGAATAAAGGTAAAGCCCCAGCCGAGCAAGAGAAATCTTCATTGGAGTACTGCAAGGCCGTCACTGTGCATGACGAGGAGAAGACTCAAGTAGCTGAGGAGGATGAGA
CTACTGAAACTGAGGAACTCACTGGAGAAGCCAACCAGAGAAAACTCAGGTTAAGGGTCCCTGCAACAGATAGGGATATCGGGTTCAATTGCATGTGGGAGAATCATGTA
TGCTCGGGAGAGATCCATGCTCGGCTTCGTGTCGCCTTGGGCGCGGCCTCCCTTCGGAAAGTGTTTGCATGGGTCAATAACAAGGTGAATGGGGAGAATGTCTCTAATTC
ATCCAACGAAGGTGCTGTTGGAATTTTGAGCAAAGGGTTGAGAATTGGTGAATTCGGTCAAGTCTTCAAACGAAAAGAGTATGAAGACGATGTTAACCCGGACAGTGATT
TCCATGATTGGGGAGAATACGGAGAAGAGAAGTCGAGCACATATACAGATGGAGCACATGAGAGTGGGGAGGAAGATTTGTATGAAGATGATGTAAATGCCCAAGATATG
GAGGAAAACATCGGGGTTCAGCAAGTGGTACCTGAAATTGCACAGAACGTGGATCCTCCTTCTATGCCGTTGCGTGGTAGCGTCAACATCCACACGAGGACGTGTACTTG
TCGTGAATTCGATTGCTTCAAACTTTCGTGCTCCCATGCAATCACAGCCTGCATATACTGTAATGTGTCGTACTTGGATATCTGTTCTCCATGCTACCATGTTGAAGCAG
TGCTAGCTACTTATGCAGAACCCATATATCCACTAGGACATGTGTCGGAGTGGAAACATCCGAAAATTTTGTGGATTTCGAAGTCTTGCCTTCGAAGAAGGGTTGAAGAG
TGGGTCGACGACAAACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGCTCGGGAGAGGTTAGGTCAGATTGTGCATGCGAAAGGTACAGGGAGTGCTCAATCGATTGAGTCTGCAGCTGCCCTTGCATCCCAGACTCAGGAGGAAAATCT
CGAGCAGGTTCAGTATGTCTCTAATTTTAATTCTAGGGGGTACAATAATAGTTATACACCTACACATTATCACCCTAATAATAGAAATCATGAGAATTTTTCGTATGCAA
ATAATAAGAATGTTCTGAATCCTCCTGGCTTTACTCCTCAAAGTCAAGAAAGTAAAAAGTCTCTAGAGGATCTCGTTGGAGCTTTTATTGCAGAATCAAGTAATAGGTCA
AATAAGCTCGAGGAGGCCGTGATTGCCATAAACACCACTGTCAATGGTCATTCTGCAGCCATCAAGAACATAGAGACTCAGCTGGGACAACTGGTAAGTGTTGTCAACAC
CATGAATAAAGGTAAAGCCCCAGCCGAGCAAGAGAAATCTTCATTGGAGTACTGCAAGGCCGTCACTGTGCATGACGAGGAGAAGACTCAAGTAGCTGAGGAGGATGAGA
CTACTGAAACTGAGGAACTCACTGGAGAAGCCAACCAGAGAAAACTCAGGTTAAGGGTCCCTGCAACAGATAGGGATATCGGGTTCAATTGCATGTGGGAGAATCATGTA
TGCTCGGGAGAGATCCATGCTCGGCTTCGTGTCGCCTTGGGCGCGGCCTCCCTTCGGAAAGTGTTTGCATGGGTCAATAACAAGGTGAATGGGGAGAATGTCTCTAATTC
ATCCAACGAAGGTGCTGTTGGAATTTTGAGCAAAGGGTTGAGAATTGGTGAATTCGGTCAAGTCTTCAAACGAAAAGAGTATGAAGACGATGTTAACCCGGACAGTGATT
TCCATGATTGGGGAGAATACGGAGAAGAGAAGTCGAGCACATATACAGATGGAGCACATGAGAGTGGGGAGGAAGATTTGTATGAAGATGATGTAAATGCCCAAGATATG
GAGGAAAACATCGGGGTTCAGCAAGTGGTACCTGAAATTGCACAGAACGTGGATCCTCCTTCTATGCCGTTGCGTGGTAGCGTCAACATCCACACGAGGACGTGTACTTG
TCGTGAATTCGATTGCTTCAAACTTTCGTGCTCCCATGCAATCACAGCCTGCATATACTGTAATGTGTCGTACTTGGATATCTGTTCTCCATGCTACCATGTTGAAGCAG
TGCTAGCTACTTATGCAGAACCCATATATCCACTAGGACATGTGTCGGAGTGGAAACATCCGAAAATTTTGTGGATTTCGAAGTCTTGCCTTCGAAGAAGGGTTGAAGAG
TGGGTCGACGACAAACCTTGA
Protein sequenceShow/hide protein sequence
MYARERLGQIVHAKGTGSAQSIESAAALASQTQEENLEQVQYVSNFNSRGYNNSYTPTHYHPNNRNHENFSYANNKNVLNPPGFTPQSQESKKSLEDLVGAFIAESSNRS
NKLEEAVIAINTTVNGHSAAIKNIETQLGQLVSVVNTMNKGKAPAEQEKSSLEYCKAVTVHDEEKTQVAEEDETTETEELTGEANQRKLRLRVPATDRDIGFNCMWENHV
CSGEIHARLRVALGAASLRKVFAWVNNKVNGENVSNSSNEGAVGILSKGLRIGEFGQVFKRKEYEDDVNPDSDFHDWGEYGEEKSSTYTDGAHESGEEDLYEDDVNAQDM
EENIGVQQVVPEIAQNVDPPSMPLRGSVNIHTRTCTCREFDCFKLSCSHAITACIYCNVSYLDICSPCYHVEAVLATYAEPIYPLGHVSEWKHPKILWISKSCLRRRVEE
WVDDKP