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Spg006668 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006668
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransmembrane protein
Genome locationscaffold7:46970028..46971697
RNA-Seq ExpressionSpg006668
SyntenySpg006668
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN51411.1 hypothetical protein Csa_007923 [Cucumis sativus]6.1e-2579.76Show/hide
Query:  MKSVASPSSVEALRNGSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKD
        MKS  S SSVEALRN  +GIAS+LSS D SR LLATRPP R+VVS+ TCSKLCA+CFV GVVVGYSLKRCVNRW+SKLLRRLKD
Subjt:  MKSVASPSSVEALRNGSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKD

XP_022956291.1 uncharacterized protein LOC111458016 [Cucurbita moschata]1.3e-2788.24Show/hide
Query:  MKSVASPSSVEALRNGSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD
        MKS A PSSVEALRNG +GIASALSSSDQSRLLLATRPP R+VVS+LTCSKLC ICFVAGVVVGYSLKR VNRWVSKLLRRLK+D
Subjt:  MKSVASPSSVEALRNGSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD

XP_022974252.1 uncharacterized protein LOC111472885 [Cucurbita maxima]1.6e-2888.24Show/hide
Query:  MKSVASPSSVEALRNGSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD
        MKS A PSSVEALR+G +GIASALSSSDQSRLLLATRPP R+VVS+LTCSKLC ICFVAGV+VGYSLKRCVNRWVSKLLRRLKDD
Subjt:  MKSVASPSSVEALRNGSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD

XP_023540347.1 uncharacterized protein LOC111800746 [Cucurbita pepo subsp. pepo]4.5e-2889.41Show/hide
Query:  MKSVASPSSVEALRNGSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD
        MKS A PSSVEALRNG +GIASALSSSDQSRLLLATRPP R+VVS+LTCSKLC ICFVAGVVVGYSLKR VNRWVSKLLRRLKDD
Subjt:  MKSVASPSSVEALRNGSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD

XP_038893067.1 uncharacterized protein LOC120081950 [Benincasa hispida]5.9e-2885.88Show/hide
Query:  MKSVASPSSVEALRNGSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD
        MKS  S SSVE LRN  +GIASALSSSDQSRLLLATRPP R+VVS+ TCSKLCA+CFVAGVVVGYSLKRCVNRWVSKLLRRLKDD
Subjt:  MKSVASPSSVEALRNGSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD

TrEMBL top hitse value%identityAlignment
A0A0A0KUK2 Uncharacterized protein3.0e-2579.76Show/hide
Query:  MKSVASPSSVEALRNGSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKD
        MKS  S SSVEALRN  +GIAS+LSS D SR LLATRPP R+VVS+ TCSKLCA+CFV GVVVGYSLKRCVNRW+SKLLRRLKD
Subjt:  MKSVASPSSVEALRNGSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKD

A0A540LSP8 Uncharacterized protein1.2e-1564.29Show/hide
Query:  GSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD
        G++G+A+ALSSSDQSR+LL    P+R+VVS+ TCSKLC +CFVAG+VVGY+LKR V  W SKLL++++DD
Subjt:  GSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD

A0A6J1GW53 uncharacterized protein LOC1114580166.4e-2888.24Show/hide
Query:  MKSVASPSSVEALRNGSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD
        MKS A PSSVEALRNG +GIASALSSSDQSRLLLATRPP R+VVS+LTCSKLC ICFVAGVVVGYSLKR VNRWVSKLLRRLK+D
Subjt:  MKSVASPSSVEALRNGSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD

A0A6J1I9S5 uncharacterized protein LOC1114728857.5e-2988.24Show/hide
Query:  MKSVASPSSVEALRNGSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD
        MKS A PSSVEALR+G +GIASALSSSDQSRLLLATRPP R+VVS+LTCSKLC ICFVAGV+VGYSLKRCVNRWVSKLLRRLKDD
Subjt:  MKSVASPSSVEALRNGSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD

W9RT53 Uncharacterized protein6.6e-1765.48Show/hide
Query:  KSVASPSSVEALRNGSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD
        KS +S SS   +   ++GI++ALSS DQSRLL+ +RPP R VVS+ TCSKLCAICFV GVVVGY+LKR V RW S+LL+RLKDD
Subjt:  KSVASPSSVEALRNGSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G19240.1 unknown protein9.8e-1351.09Show/hide
Query:  KSVASPSSVEALRNGSDGI--------ASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD
        KS AS SS  +L + +D +         +  ++ D     L TRPPS   VS+ TCSKLCA+ FVAGV VGY+LKR V RW SKLLRR+KDD
Subjt:  KSVASPSSVEALRNGSDGI--------ASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCGGTGGCTTCACCTTCTTCAGTCGAAGCTTTGAGGAATGGAAGTGATGGAATCGCCTCCGCTCTATCTTCTTCCGATCAGTCTCGTTTGTTGCTTGCCACCAG
ACCTCCCAGCAGGAAAGTAGTATCAATGTTGACTTGTTCGAAGCTATGCGCTATTTGCTTTGTTGCCGGGGTGGTTGTTGGTTACTCGTTAAAGCGATGTGTCAATCGAT
GGGTTTCCAAACTGTTGAGGAGATTGAAAGATGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCGGTGGCTTCACCTTCTTCAGTCGAAGCTTTGAGGAATGGAAGTGATGGAATCGCCTCCGCTCTATCTTCTTCCGATCAGTCTCGTTTGTTGCTTGCCACCAG
ACCTCCCAGCAGGAAAGTAGTATCAATGTTGACTTGTTCGAAGCTATGCGCTATTTGCTTTGTTGCCGGGGTGGTTGTTGGTTACTCGTTAAAGCGATGTGTCAATCGAT
GGGTTTCCAAACTGTTGAGGAGATTGAAAGATGATTGA
Protein sequenceShow/hide protein sequence
MKSVASPSSVEALRNGSDGIASALSSSDQSRLLLATRPPSRKVVSMLTCSKLCAICFVAGVVVGYSLKRCVNRWVSKLLRRLKDD