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Spg006676 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006676
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTranslation factor GUF1 homolog, chloroplastic
Genome locationscaffold1:56537696..56539951
RNA-Seq ExpressionSpg006676
SyntenySpg006676
Gene Ontology termsNA
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449438.1 PREDICTED: translation factor GUF1 homolog, chloroplastic [Cucumis melo]1.3e-07100Show/hide
Query:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE
        AARMRYMYKNEAYCLNLIDTPGHVDFSYE
Subjt:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE

XP_022158375.1 translation factor GUF1 homolog, chloroplastic [Momordica charantia]1.3e-07100Show/hide
Query:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE
        AARMRYMYKNEAYCLNLIDTPGHVDFSYE
Subjt:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE

XP_031740276.1 translation factor GUF1 homolog, chloroplastic isoform X2 [Cucumis sativus]1.3e-07100Show/hide
Query:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE
        AARMRYMYKNEAYCLNLIDTPGHVDFSYE
Subjt:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE

XP_031740278.1 translation factor GUF1 homolog, chloroplastic isoform X4 [Cucumis sativus]1.3e-07100Show/hide
Query:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE
        AARMRYMYKNEAYCLNLIDTPGHVDFSYE
Subjt:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE

XP_038889419.1 translation factor GUF1 homolog, chloroplastic [Benincasa hispida]1.3e-07100Show/hide
Query:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE
        AARMRYMYKNEAYCLNLIDTPGHVDFSYE
Subjt:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE

TrEMBL top hitse value%identityAlignment
A0A0A0L295 Tr-type G domain-containing protein6.5e-08100Show/hide
Query:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE
        AARMRYMYKNEAYCLNLIDTPGHVDFSYE
Subjt:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE

A0A1S3BMN9 Translation factor GUF1 homolog, chloroplastic6.5e-08100Show/hide
Query:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE
        AARMRYMYKNEAYCLNLIDTPGHVDFSYE
Subjt:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE

A0A2P5BIW9 Translation factor GUF1 homolog, chloroplastic1.9e-0796.55Show/hide
Query:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE
        AARMRYM+KNEAYCLNLIDTPGHVDFSYE
Subjt:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE

A0A6J1DVN5 Translation factor GUF1 homolog, chloroplastic6.5e-08100Show/hide
Query:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE
        AARMRYMYKNEAYCLNLIDTPGHVDFSYE
Subjt:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE

A0A6J1HRW4 Translation factor GUF1 homolog, chloroplastic6.5e-08100Show/hide
Query:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE
        AARMRYMYKNEAYCLNLIDTPGHVDFSYE
Subjt:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE

SwissProt top hitse value%identityAlignment
A5B4D2 Translation factor GUF1 homolog, chloroplastic1.6e-0886.21Show/hide
Query:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE
        AARMRY+++NE YCLNLIDTPGHVDFSYE
Subjt:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE

B8AI54 Translation factor GUF1 homolog, chloroplastic2.4e-0782.76Show/hide
Query:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE
        AARMRY+  +E YCLNLIDTPGHVDFSYE
Subjt:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE

B9F2U5 Translation factor GUF1 homolog, chloroplastic2.4e-0782.76Show/hide
Query:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE
        AARMRY+  +E YCLNLIDTPGHVDFSYE
Subjt:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE

B9GHA6 Translation factor GUF1 homolog, chloroplastic4.3e-0989.66Show/hide
Query:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE
        AARMRY+Y+NE YCLNLIDTPGHVDFSYE
Subjt:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE

B9RHQ5 Translation factor GUF1 homolog, chloroplastic1.6e-0886.21Show/hide
Query:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE
        AARMRY+Y+N+ YCLNLIDTPGHVDFSYE
Subjt:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE

Arabidopsis top hitse value%identityAlignment
AT5G08650.1 Small GTP-binding protein2.2e-0879.31Show/hide
Query:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE
        AARMRY+Y++  +CLNLIDTPGHVDFSYE
Subjt:  AARMRYMYKNEAYCLNLIDTPGHVDFSYE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGGTTTGGCCCAAAATGGTGGAGATGGATCCAGGGTTGTATTTCTTCGGCAGACTACTCCATCATTATCAATGGAAAATCGAGGGGCAGCCCGAATGCGTTA
CATGTATAAGAATGAAGCATATTGCTTGAATTTGATTGATACACCAGGTCATGTTGACTTCTCTTATGAGCGTGAGGGTAAGGTTGGACTTAAGCCGTTTTTGGAGGGGT
TTGATTGGTGTCCCATCTCTTTCATGGACAAGTCAGAGTTGGAGGCCCTGTTTATCCCAGAAGAAATCAGAAAAGTGCTTTTCAACTTTGATAAGTTCAAAGCTCCAGTC
CCGACGGTTTTTCTATGGCCTTTTCCTAGGATAGTTGGGATTGCATCAAGAGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGGGTTTGGCCCAAAATGGTGGAGATGGATCCAGGGTTGTATTTCTTCGGCAGACTACTCCATCATTATCAATGGAAAATCGAGGGGCAGCCCGAATGCGTTA
CATGTATAAGAATGAAGCATATTGCTTGAATTTGATTGATACACCAGGTCATGTTGACTTCTCTTATGAGCGTGAGGGTAAGGTTGGACTTAAGCCGTTTTTGGAGGGGT
TTGATTGGTGTCCCATCTCTTTCATGGACAAGTCAGAGTTGGAGGCCCTGTTTATCCCAGAAGAAATCAGAAAAGTGCTTTTCAACTTTGATAAGTTCAAAGCTCCAGTC
CCGACGGTTTTTCTATGGCCTTTTCCTAGGATAGTTGGGATTGCATCAAGAGGGTGA
Protein sequenceShow/hide protein sequence
MEKGLAQNGGDGSRVVFLRQTTPSLSMENRGAARMRYMYKNEAYCLNLIDTPGHVDFSYEREGKVGLKPFLEGFDWCPISFMDKSELEALFIPEEIRKVLFNFDKFKAPV
PTVFLWPFPRIVGIASRG