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Spg006686 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006686
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA-directed DNA polymerase
Genome locationscaffold1:55276553..55278043
RNA-Seq ExpressionSpg006686
SyntenySpg006686
Gene Ontology termsGO:0006261 - DNA-dependent DNA replication (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008449676.1 PREDICTED: DNA polymerase I [Cucumis melo]1.4e-1192.5Show/hide
Query:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN
        +DNGEKFTSLLTAIGAYAE FSADPIIRRVLYLWKKL+KN
Subjt:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN
XP_022149355.1 uncharacterized protein LOC111017796 isoform X1 [Momordica charantia]1.3e-1295Show/hide
Query:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN
        +DNGEKFTSL+TAIGAYAEGFSADPIIRRVLYLWKKLEKN
Subjt:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN
XP_022149356.1 uncharacterized protein LOC111017796 isoform X2 [Momordica charantia]1.3e-1295Show/hide
Query:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN
        +DNGEKFTSL+TAIGAYAEGFSADPIIRRVLYLWKKLEKN
Subjt:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN
XP_022149357.1 uncharacterized protein LOC111017796 isoform X3 [Momordica charantia]1.3e-1295Show/hide
Query:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN
        +DNGEKFTSL+TAIGAYAEGFSADPIIRRVLYLWKKLEKN
Subjt:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN
XP_022149360.1 uncharacterized protein LOC111017796 isoform X5 [Momordica charantia]1.3e-1295Show/hide
Query:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN
        +DNGEKFTSL+TAIGAYAEGFSADPIIRRVLYLWKKLEKN
Subjt:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN
TrEMBL top hitse value%identityAlignment
A0A0A0L3M4 Uncharacterized protein6.8e-1292.5Show/hide
Query:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN
        +DNGEKFTSLLTAIGAYAE FSADPIIRRVLYLWKKL+KN
Subjt:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN
A0A6J1D5H5 DNA-directed DNA polymerase6.1e-1395Show/hide
Query:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN
        +DNGEKFTSL+TAIGAYAEGFSADPIIRRVLYLWKKLEKN
Subjt:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN
A0A6J1D5H7 DNA-directed DNA polymerase6.1e-1395Show/hide
Query:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN
        +DNGEKFTSL+TAIGAYAEGFSADPIIRRVLYLWKKLEKN
Subjt:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN
A0A6J1D7Q6 DNA-directed DNA polymerase6.1e-1395Show/hide
Query:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN
        +DNGEKFTSL+TAIGAYAEGFSADPIIRRVLYLWKKLEKN
Subjt:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN
A0A6J1D847 uncharacterized protein LOC111017796 isoform X26.1e-1395Show/hide
Query:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN
        +DNGEKFTSL+TAIGAYAEGFSADPIIRRVLYLWKKLEKN
Subjt:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52050.1 5'-3' exonuclease family protein8.2e-1071.05Show/hide
Query:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLE
        +DNGEK +SLL AI  YAEGFSADP+IRR   LW+KLE
Subjt:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLE
AT3G52050.2 5'-3' exonuclease family protein8.2e-1071.05Show/hide
Query:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLE
        +DNGEK +SLL AI  YAEGFSADP+IRR   LW+KLE
Subjt:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLE
AT3G52050.3 5'-3' exonuclease family protein8.2e-1071.05Show/hide
Query:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLE
        +DNGEK +SLL AI  YAEGFSADP+IRR   LW+KLE
Subjt:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLE
AT3G52050.4 5'-3' exonuclease family protein8.2e-1071.05Show/hide
Query:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLE
        +DNGEK +SLL AI  YAEGFSADP+IRR   LW+KLE
Subjt:  KDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCAGAATCTTACACCTCTAAGGAACCTCTGCTAGCAAAAACCGAAGGTGTGAGCAGCGTCCTTTTGGTTGCCTCTGCACAGGACTGCCAATTCTTATTGAGAGC
AAAGGTGGGATTCTGTTTTCGAATCATGTCAATTGTCTCGAAGGATAATGGGGAGAAATTTACAAGCCTGTTAACAGCTATTGGTGCGTATGCAGAAGGATTCTCAGCAG
ATCCAATCATCAGAAGAGTACTCTACTTGTGGAAGAAGCTCGAAAAAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTTCCAGAATCTTACACCTCTAAGGAACCTCTGCTAGCAAAAACCGAAGGTGTGAGCAGCGTCCTTTTGGTTGCCTCTGCACAGGACTGCCAATTCTTATTGAGAGC
AAAGGTGGGATTCTGTTTTCGAATCATGTCAATTGTCTCGAAGGATAATGGGGAGAAATTTACAAGCCTGTTAACAGCTATTGGTGCGTATGCAGAAGGATTCTCAGCAG
ATCCAATCATCAGAAGAGTACTCTACTTGTGGAAGAAGCTCGAAAAAAATTAG
Protein sequenceShow/hide protein sequence
MLPESYTSKEPLLAKTEGVSSVLLVASAQDCQFLLRAKVGFCFRIMSIVSKDNGEKFTSLLTAIGAYAEGFSADPIIRRVLYLWKKLEKN