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Spg006688 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006688
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionVHS domain-containing protein
Genome locationscaffold1:55989499..55990425
RNA-Seq ExpressionSpg006688
SyntenySpg006688
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A0L323 VHS domain-containing protein6.7e-0590.32Show/hide
Query:  IIEKASNALEVLKEVLDAVDPRHPEVSSLAN
        IIEKA NALEVLKEVLDAVDPRHPEV SLA+
Subjt:  IIEKASNALEVLKEVLDAVDPRHPEVSSLAN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G63640.1 ENTH/VHS/GAT family protein9.6e-0472Show/hide
Query:  IIEKASNALEVLKEVLDAVDPRHPE
        I++KAS ALE+LKEVLDAVD ++PE
Subjt:  IIEKASNALEVLKEVLDAVDPRHPE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTCTGAAGAAGTTTTTATTGACCATCCTTTTATTGAAATCTCCCAAGCCTCTAACGATCCAAGAAAGAATTTTCATGATGGCATCCCCAATAAGAAGTTAAATGA
TATTGAGAGAATTTCTTTTAAACCTAAGAACCTGGTTCTATTGAACCTCGGGACCTTTGTCCATTGTTATTGGATTGATTGTATAATCGAAAAGGCTAGCAATGCTTTAG
AAGTTCTGAAAGAAGTTCTTGATGCTGTTGATCCTCGGCATCCTGAGGTATCTTCTCTTGCCAATTTGACTCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTCTGAAGAAGTTTTTATTGACCATCCTTTTATTGAAATCTCCCAAGCCTCTAACGATCCAAGAAAGAATTTTCATGATGGCATCCCCAATAAGAAGTTAAATGA
TATTGAGAGAATTTCTTTTAAACCTAAGAACCTGGTTCTATTGAACCTCGGGACCTTTGTCCATTGTTATTGGATTGATTGTATAATCGAAAAGGCTAGCAATGCTTTAG
AAGTTCTGAAAGAAGTTCTTGATGCTGTTGATCCTCGGCATCCTGAGGTATCTTCTCTTGCCAATTTGACTCTCTAA
Protein sequenceShow/hide protein sequence
MVSEEVFIDHPFIEISQASNDPRKNFHDGIPNKKLNDIERISFKPKNLVLLNLGTFVHCYWIDCIIEKASNALEVLKEVLDAVDPRHPEVSSLANLTL