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Spg006702 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006702
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionTransaldolase
Genome locationscaffold1:55169472..55170266
RNA-Seq ExpressionSpg006702
SyntenySpg006702
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0006098 - pentose-phosphate shunt (biological process)
GO:0009749 - response to glucose (biological process)
GO:0009809 - lignin biosynthetic process (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004801 - sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity (molecular function)
InterPro domainsIPR001585 - Transaldolase/Fructose-6-phosphate aldolase
IPR013785 - Aldolase-type TIM barrel


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008454148.1 PREDICTED: transaldolase [Cucumis melo]2.5e-1990Show/hide
Query:  SVSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKL
        +VSRTIDSNVSE EGIYSALEKLG DW EVGNQLEVEGVDSFKKSFDSLLNTLQDKA  L
Subjt:  SVSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKL
XP_022158675.1 uncharacterized protein LOC111025138 [Momordica charantia]2.5e-1990Show/hide
Query:  SVSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKL
        +VSRTIDSNVSE EGIYSALEKLG DW EVGNQLEVEGVDSFKKSFDSLLNTLQDKA  L
Subjt:  SVSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKL
XP_022955732.1 uncharacterized protein LOC111457643 [Cucurbita moschata]7.2e-1988.33Show/hide
Query:  SVSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKL
        +VSRTIDSNVSE EGIYSALEKLG DW EVGNQLEVEGVDSFKKSF+SLLNTLQDKA  L
Subjt:  SVSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKL
XP_022980880.1 uncharacterized protein LOC111480133 [Cucurbita maxima]7.2e-1988.33Show/hide
Query:  SVSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKL
        +VSRTIDSNVSE EGIYSALEKLG DW EVGNQLEVEGVDSFKKSF+SLLNTLQDKA  L
Subjt:  SVSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKL
XP_023528027.1 uncharacterized protein LOC111791070 [Cucurbita pepo subsp. pepo]7.2e-1988.33Show/hide
Query:  SVSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKL
        +VSRTIDSNVSE EGIYSALEKLG DW EVGNQLEVEGVDSFKKSF+SLLNTLQDKA  L
Subjt:  SVSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKL
TrEMBL top hitse value%identityAlignment
A0A1S3BYP7 Transaldolase1.2e-1990Show/hide
Query:  SVSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKL
        +VSRTIDSNVSE EGIYSALEKLG DW EVGNQLEVEGVDSFKKSFDSLLNTLQDKA  L
Subjt:  SVSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKL
A0A5D3E1I6 Transaldolase1.2e-1990Show/hide
Query:  SVSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKL
        +VSRTIDSNVSE EGIYSALEKLG DW EVGNQLEVEGVDSFKKSFDSLLNTLQDKA  L
Subjt:  SVSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKL
A0A6J1DWH7 Transaldolase1.2e-1990Show/hide
Query:  SVSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKL
        +VSRTIDSNVSE EGIYSALEKLG DW EVGNQLEVEGVDSFKKSFDSLLNTLQDKA  L
Subjt:  SVSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKL
A0A6J1GUF1 Transaldolase3.5e-1988.33Show/hide
Query:  SVSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKL
        +VSRTIDSNVSE EGIYSALEKLG DW EVGNQLEVEGVDSFKKSF+SLLNTLQDKA  L
Subjt:  SVSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKL
A0A6J1IXT7 Transaldolase3.5e-1988.33Show/hide
Query:  SVSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKL
        +VSRTIDSNVSE EGIYSALEKLG DW EVGNQLEVEGVDSFKKSF+SLLNTLQDKA  L
Subjt:  SVSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G13420.1 Aldolase-type TIM barrel family protein3.5e-1982.14Show/hide
Query:  VSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKA
        V RTID+NVSE EGIYSALEKLG DW +VG QLE EGVDSFKKSF+SLL TLQDKA
Subjt:  VSRTIDSNVSEVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACAGCAGCAACCACCGTCGAAGCTCGACCTTCGACGATTCCAGCAGCACCAGTCGAGGTCCACGGCAGCGAAATTGCAGCGTCTCCTCGTCGGAATATGGTAGGAA
GATGGCACACAACAGACTAGTCGTGAACAAACCCACGAACAGCCACAGATCTCGAGATCTGGAGACGGGGGAGATGTGGGTTTCGTCGTGGGTTACAGATTTGGAGATCT
GGAGACGTGGGTTTTGCCAGAAACGTGGGTGTCGCGCTAGATGCTCGCCAGCGGCAGCTCGCTGGAAAACCGGACACTCTGTTTCGAGGACTATCGATTCAAACGTATCT
GAGGTCGAAGGGATATACAGTGCACTTGAGAAGCTGGGAAATGACTGGACTGAAGTTGGGAATCAACTTGAAGTTGAGGGAGTGGATTCTTTCAAGAAGAGCTTTGACAG
CCTGCTTAATACTCTCCAAGACAAGGCCATTAAACTCTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTACAGCAGCAACCACCGTCGAAGCTCGACCTTCGACGATTCCAGCAGCACCAGTCGAGGTCCACGGCAGCGAAATTGCAGCGTCTCCTCGTCGGAATATGGTAGGAA
GATGGCACACAACAGACTAGTCGTGAACAAACCCACGAACAGCCACAGATCTCGAGATCTGGAGACGGGGGAGATGTGGGTTTCGTCGTGGGTTACAGATTTGGAGATCT
GGAGACGTGGGTTTTGCCAGAAACGTGGGTGTCGCGCTAGATGCTCGCCAGCGGCAGCTCGCTGGAAAACCGGACACTCTGTTTCGAGGACTATCGATTCAAACGTATCT
GAGGTCGAAGGGATATACAGTGCACTTGAGAAGCTGGGAAATGACTGGACTGAAGTTGGGAATCAACTTGAAGTTGAGGGAGTGGATTCTTTCAAGAAGAGCTTTGACAG
CCTGCTTAATACTCTCCAAGACAAGGCCATTAAACTCTCTTAA
Protein sequenceShow/hide protein sequence
MYSSNHRRSSTFDDSSSTSRGPRQRNCSVSSSEYGRKMAHNRLVVNKPTNSHRSRDLETGEMWVSSWVTDLEIWRRGFCQKRGCRARCSPAAARWKTGHSVSRTIDSNVS
EVEGIYSALEKLGNDWTEVGNQLEVEGVDSFKKSFDSLLNTLQDKAIKLS