CuGenDBv2

Gene ID	Spg006707
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Translation factor GUF1 homolog, chloroplastic
Genome location	scaffold1:56487255..56489427
RNA-Seq Expression	Spg006707
Synteny	Spg006707
Gene Ontology terms	GO:0045727 - positive regulation of translation (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0005759 - mitochondrial matrix (cellular component) GO:0009507 - chloroplast (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function) GO:0043022 - ribosome binding (molecular function)
InterPro domains	IPR000640 - Elongation factor EFG, domain V-like IPR006297 - Elongation factor 4 IPR035647 - EF-G domain III/V-like

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0062440.1 translation factor GUF1-like protein [Cucumis melo var. makuwa]

2.7e-49

98.08

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Query:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP
        MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITE+RASITYALP
Subjt:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP

Query:  LAEV
        LAE+
Subjt:  LAEV

XP_008449438.1 PREDICTED: translation factor GUF1 homolog, chloroplastic [Cucumis melo]

2.7e-49

98.08

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Query:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP
        MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITE+RASITYALP
Subjt:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP

Query:  LAEV
        LAE+
Subjt:  LAEV

XP_011653860.1 translation factor GUF1 homolog, chloroplastic isoform X1 [Cucumis sativus]

2.7e-49

98.08

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Query:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP
        MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITE+RASITYALP
Subjt:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP

Query:  LAEV
        LAE+
Subjt:  LAEV

XP_031740277.1 translation factor GUF1 homolog, chloroplastic isoform X3 [Cucumis sativus]

2.7e-49

98.08

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Query:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP
        MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITE+RASITYALP
Subjt:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP

Query:  LAEV
        LAE+
Subjt:  LAEV

XP_031740279.1 translation factor GUF1 homolog, chloroplastic isoform X5 [Cucumis sativus]

2.7e-49

98.08

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Query:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP
        MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITE+RASITYALP
Subjt:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP

Query:  LAEV
        LAE+
Subjt:  LAEV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KYH8 Translation factor GUF1 homolog, mitochondrial

1.3e-49

98.08

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Query:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP
        MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITE+RASITYALP
Subjt:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP

Query:  LAEV
        LAE+
Subjt:  LAEV

A0A1S3BMN9 Translation factor GUF1 homolog, chloroplastic

1.3e-49

98.08

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Query:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP
        MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITE+RASITYALP
Subjt:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP

Query:  LAEV
        LAE+
Subjt:  LAEV

A0A5A7V5D5 Translation factor GUF1 homolog, mitochondrial

1.3e-49

98.08

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Query:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP
        MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITE+RASITYALP
Subjt:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP

Query:  LAEV
        LAE+
Subjt:  LAEV

A0A6J1EAZ6 Translation factor GUF1 homolog, chloroplastic

2.9e-49

98.08

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Query:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP
        MEIVQERLEREYNLSLITTAPSVVYRVNCVNG+TVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP
Subjt:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP

Query:  LAEV
        LAE+
Subjt:  LAEV

A0A6J1HRW4 Translation factor GUF1 homolog, chloroplastic

2.9e-49

98.08

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Query:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP
        MEIVQERLEREYNLSLITTAPSVVYRVNCVNG+TVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP
Subjt:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP

Query:  LAEV
        LAE+
Subjt:  LAEV

SwissProt top hits

e value

%identity

Alignment

A5B4D2 Translation factor GUF1 homolog, chloroplastic

4.1e-48

89.42

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Query:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP
        MEI+QERLEREYNL+LITTAPSVVYRVNC+NGDTVECSNPSLLPEPGKR SIEEP+VKIEMLTPK+YIGPLMELAQ+RRGEF+EMKFITE RASITY LP
Subjt:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP

Query:  LAEV
        LAE+
Subjt:  LAEV

B8AI54 Translation factor GUF1 homolog, chloroplastic

1.8e-43

82.69

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Query:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP
        MEIVQERLEREYNL+LI TAPSVVY VN  +G+TVECSNPSLLPEPGKRRSIEEP+VKI+MLTPKEYIGP+MEL QERRGEF+EM FITE RAS+ Y LP
Subjt:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP

Query:  LAEV
        LAE+
Subjt:  LAEV

B9F2U5 Translation factor GUF1 homolog, chloroplastic

1.8e-43

82.69

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Query:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP
        MEIVQERLEREYNL+LI TAPSVVY VN  +G+TVECSNPSLLPEPGKRRSIEEP+VKI+MLTPKEYIGP+MEL QERRGEF+EM FITE RAS+ Y LP
Subjt:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP

Query:  LAEV
        LAE+
Subjt:  LAEV

B9GHA6 Translation factor GUF1 homolog, chloroplastic

1.1e-45

87.5

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Query:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP
        MEIVQERLEREYNLSLITTAPSVVYRV+CV+ D VECSNPSLLPEPGKRRS+EEPFVKIE+LTPK+YIG LMELAQERRGEF+EMK+ITE RASITY LP
Subjt:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP

Query:  LAEV
        LAE+
Subjt:  LAEV

B9RHQ5 Translation factor GUF1 homolog, chloroplastic

1.2e-47

90.38

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Query:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP
        MEIVQERLEREYNLSLITTAPSVVYRVNCV+GDTVECSNPSLLPEPGKRRSIEEP VKIEMLTPK+YIGPLMELAQ+RRGEF+EM+FIT  RASITY LP
Subjt:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP

Query:  LAEV
        LAE+
Subjt:  LAEV

Arabidopsis top hits

e value

%identity

Alignment

AT5G08650.1 Small GTP-binding protein

4.1e-43

80.77

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Query:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP
        MEIVQERLEREYNL+LITTAPSVVYRVN VNGDT  CSNPS LP+PG+R+S+EEP+VKIE+LTPK+YIG LMELAQERRGEF+EMK+I E RASI Y LP
Subjt:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALP

Query:  LAEV
        LAE+
Subjt:  LAEV

AT5G39900.1 Small GTP-binding protein

3.4e-13

34.23

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Query:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRR--SIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYA
        M++  +RLE+EY   +I+T P+V Y     +G  ++  NP+ LP   K R  +  EP V   ++ P EY+G ++ L  +RRG+  E  FI   R  + Y 
Subjt:  MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRR--SIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYA

Query:  LPLAEVSLSHF
        LPL E+ +  +
Subjt:  LPLAEVSLSHF

Sequences

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CDS sequence

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ATGGAAATCGTCCAGGAAAGACTTGAAAGGGAATACAACCTGAGCCTGATCACTACAGCTCCAAGTGTTGTATATAGAGTTAACTGTGTAAACGGTGATACTGTTGAATG
CTCAAATCCATCTTTACTTCCAGAACCTGGAAAAAGGAGGTCAATTGAGGAACCATTTGTCAAGATTGAGATGCTTACACCAAAAGAGTATATTGGACCACTGATGGAGT
TGGCCCAAGAAAGAAGAGGAGAGTTTCAAGAAATGAAATTTATTACAGAAATTCGAGCATCAATCACCTATGCACTACCACTAGCGGAAGTAAGTTTGTCTCACTTCCAT
GCTTAA

mRNA sequence

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Protein sequence

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MEIVQERLEREYNLSLITTAPSVVYRVNCVNGDTVECSNPSLLPEPGKRRSIEEPFVKIEMLTPKEYIGPLMELAQERRGEFQEMKFITEIRASITYALPLAEVSLSHFH
A

Spg006707 (gene) of Sponge gourd (cylindrica) v1 genome