; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006717 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006717
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold1:56461550..56464867
RNA-Seq ExpressionSpg006717
SyntenySpg006717
Gene Ontology termsGO:0006950 - response to stress (biological process)
GO:0090304 - nucleic acid metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBH07150.1 TatD related DNase [Prunus dulcis]4.6e-4736.09Show/hide
Query:  QLKEIQPFLPLLLKT------------ISNSKDVGWVNVKSWGRSGGLLVLWDESKLKIVEFLQGGYTLSIKVSFQQHKECWVTNVYGPNDYRERKFLWE
        QL+ ++P + +LL+T            +  S+   WV   S GRSGG+ VLW+   + +++ + G +++SI++      + W++ +YGP   RER   WE
Subjt:  QLKEIQPFLPLLLKT------------ISNSKDVGWVNVKSWGRSGGLLVLWDESKLKIVEFLQGGYTLSIKVSFQQHKECWVTNVYGPNDYRERKFLWE

Query:  ELRSLLLYCEGPWCIGGDFNVTRWIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWSRPGDDSSQSLIDRFLISKEWDVMFDNSRVSKQVRTIS
        EL  L  YC   WC+GGDFNV R+  E+    R T+ MR FN  I E  L +  L +  FTWS   +++    +DRFL+S  W+  F + R     R  S
Subjt:  ELRSLLLYCEGPWCIGGDFNVTRWIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWSRPGDDSSQSLIDRFLISKEWDVMFDNSRVSKQVRTIS

Query:  DHFPLLLEAGNFAWGPSPFRFFNSWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNW
        DH P+ L+     WGPSPFRF N WL   D  + ++L   +D++ GW G+   S+L+ LK  +K W
Subjt:  DHFPLLLEAGNFAWGPSPFRFFNSWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNW

KAA0056838.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]2.9e-4922.73Show/hide
Query:  LLKFVETKPVENISKKSKYEVSSKQVNNTSKNLDRSYADMVRVNSGEPHFGSHTKKLPEISSFWVRKEKEVVDLK--------LDEFCVVSRMFAHNDWK
        L+ F  + P + I  + + E  S   ++ S + D S     +V S       + K+    S     +    +  K         ++  +++R   H+DW 
Subjt:  LLKFVETKPVENISKKSKYEVSSKQVNNTSKNLDRSYADMVRVNSGEPHFGSHTKKLPEISSFWVRKEKEVVDLK--------LDEFCVVSRMFAHNDWK

Query:  EVKQALENYFHSKVLLNPFMADKALVKLKDSSSKLKFDGK----WKLIGNFHLKIENWSCHKHFHPEVIEGYGGWIALKNLPLPFWNRFIFEIIGNHFGG
         +  +L           PF ADKA++ L    +KL    K    W  +GN+ +K E+W  + H    VI  YGGW+  + +PL  WN   F+ IG+  GG
Subjt:  EVKQALENYFHSKVLLNPFMADKALVKLKDSSSKLKFDGK----WKLIGNFHLKIENWSCHKHFHPEVIEGYGGWIALKNLPLPFWNRFIFEIIGNHFGG

Query:  LVSISSQTLNLLDCSEARMEVKRNFCGFLPAEIVVTDKIHGNFALRFGDISPLDPPRFIPMDLSLSDFDNEIDLKRVSQVRMDEEISSLQEDINSFNGQG
         + ++ +T+ +    +A+++V+ N+ GF+PA I++TD    NF +    + P +    +  ++ +         K   +      ++    +  ++NG  
Subjt:  LVSISSQTLNLLDCSEARMEVKRNFCGFLPAEIVVTDKIHGNFALRFGDISPLDPPRFIPMDLSLSDFDNEIDLKRVSQVRMDEEISSLQEDINSFNGQG

Query:  LNPPAKQNRVNQEISSSSKDPNGIFVECREIMNEGGLIIEESVELSKKKAELLQENTFNASVSCSKEALIEKDINANVSVIKDALIDGAVHESQELLFTP
          PP +  R + + S  + D +                I    +  K  +   + + F+  +S  +     K+    + +I D         S+ +    
Subjt:  LNPPAKQNRVNQEISSSSKDPNGIFVECREIMNEGGLIIEESVELSKKKAELLQENTFNASVSCSKEALIEKDINANVSVIKDALIDGAVHESQELLFTP

Query:  VYDPTSGLKRSNAAGFEENESSSKDPNDIMDDSLEKLNDGSSYLVNSVELLHENAFSDLVSRSKEALIKEINCNLIGPVEISKEKSVLLQERYFNANGKG
        V   + G  +SN++  E N                    G S  ++++    E  +S    ++K  L   I  +   P E +++ ++ L+E      G+G
Subjt:  VYDPTSGLKRSNAAGFEENESSSKDPNDIMDDSLEKLNDGSSYLVNSVELLHENAFSDLVSRSKEALIKEINCNLIGPVEISKEKSVLLQERYFNANGKG

Query:  INAIGSYIQGALTDGALNESQDLLLTPIHDQPSDLKSCNAAGLKENEQNVSKALKKKYESFPLHYSRRKCKKSDILDSIPINSNYNPDVIEESCSQFLLS
                        +N S D  + PI    S ++S N  G                                 LD++   +N  PD   +S       
Subjt:  INAIGSYIQGALTDGALNESQDLLLTPIHDQPSDLKSCNAAGLKENEQNVSKALKKKYESFPLHYSRRKCKKSDILDSIPINSNYNPDVIEESCSQFLLS

Query:  ALNQPRCCQTNLNELSNSTSSNQYILSNIQSNPSLTKGVFIPSSKVEIKVDQSYSSPIDSDDDSVVSISSVEAENQYLNDENNELLEEDSFAMAFNRIFQ
                 T+  E  N T S   +      N S ++     +SK             D+   S + I     E   +  + NEL     +         
Subjt:  ALNQPRCCQTNLNELSNSTSSNQYILSNIQSNPSLTKGVFIPSSKVEIKVDQSYSSPIDSDDDSVVSISSVEAENQYLNDENNELLEEDSFAMAFNRIFQ

Query:  NNDDASEVQLNACDVLATPLVSVPSKFSSLLEDCDIQLKEIQPFLPLLLKTISNSKDVGWVNVKSWGRSGGLLVLWDESKLKIVEFLQGGYTLSIKVSFQ
         ND                 V   S F  ++ D ++ +    P                       G  GG+LVLWD++K K+ +   G Y++S+ +   
Subjt:  NNDDASEVQLNACDVLATPLVSVPSKFSSLLEDCDIQLKEIQPFLPLLLKTISNSKDVGWVNVKSWGRSGGLLVLWDESKLKIVEFLQGGYTLSIKVSFQ

Query:  QHKECWVTNVYGPNDYRERKFLWEELRSLLLYCEGPWCIGGDFNVTRWIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWSRPGDDSSQSLIDR
         +   W+T+VYGP  Y +R  LW EL  L   C   W I GDFN+ RW  E    S   R M  FN  I    L++ PL +  FTWS    + + S +DR
Subjt:  QHKECWVTNVYGPNDYRERKFLWEELRSLLLYCEGPWCIGGDFNVTRWIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWSRPGDDSSQSLIDR

Query:  FLISKEWDVMFDNSRVSKQVRTISDHFPLLLEAGNFAWGPSPFRFFNSWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNW
        FL+SK W+  F         R ISDHFP+LLE+    WGP PFR  NS L   D  K      +  K  G+ G+     L  L   IK W
Subjt:  FLISKEWDVMFDNSRVSKQVRTISDHFPLLLEAGNFAWGPSPFRFFNSWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNW

TYJ98683.1 hypothetical protein E5676_scaffold429G00120 [Cucumis melo var. makuwa]1.2e-7451.18Show/hide
Query:  LLKTISNSKDVGWVNVKSWGRSGGLLVLWDESKLKIVEFLQGGYTLSIKVSFQQHKECWVTNVYGPNDYRERKFLWEELRSLLLYCEGPWCIGGDFNVTR
        L+K++ +SKD+GW  V+S+GR GG+L +WD SK+K+VE L+GGY+LSI       K CW+TNVYGP DY ER+F+W  L SL  YC G WCIGG  N+TR
Subjt:  LLKTISNSKDVGWVNVKSWGRSGGLLVLWDESKLKIVEFLQGGYTLSIKVSFQQHKECWVTNVYGPNDYRERKFLWEELRSLLLYCEGPWCIGGDFNVTR

Query:  WIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWSRPGDDSSQSLIDRFLISKEWDVMFDNSRVSKQVRTISDHFPLLLEAGNFAWGPSPFRFFN
        W HE  P+ + TRGMRQFN  ID L + ELPL +G+ TWSR G   S+SL+D F I KEWD + +NSRV ++  TISDHFPLLLEAG+  WGPSPFRF N
Subjt:  WIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWSRPGDDSSQSLIDRFLISKEWDVMFDNSRVSKQVRTISDHFPLLLEAGNFAWGPSPFRFFN

Query:  SWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNWFAVFEERGSRK
        SWL  ++C +I++   +      W GFV+     +   +    F   +  G  K
Subjt:  SWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNWFAVFEERGSRK

VVA20479.1 Hypothetical predicted protein, partial [Prunus dulcis]3.5e-4736.09Show/hide
Query:  QLKEIQPFLPLLLKT------------ISNSKDVGWVNVKSWGRSGGLLVLWDESKLKIVEFLQGGYTLSIKVSFQQHKECWVTNVYGPNDYRERKFLWE
        QL+ ++P + +LL+T            +  S+   WV   S GRSGG+ VLW+   + +++ + G +++SI++      + W++ +YGP   RER   WE
Subjt:  QLKEIQPFLPLLLKT------------ISNSKDVGWVNVKSWGRSGGLLVLWDESKLKIVEFLQGGYTLSIKVSFQQHKECWVTNVYGPNDYRERKFLWE

Query:  ELRSLLLYCEGPWCIGGDFNVTRWIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWSRPGDDSSQSLIDRFLISKEWDVMFDNSRVSKQVRTIS
        EL  L  YC   WC+GGDFNV R+  E+    R T+ MR FN  I E  L +  L +  FTWS   +++    +DRFL+S  W+  F + R     R  S
Subjt:  ELRSLLLYCEGPWCIGGDFNVTRWIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWSRPGDDSSQSLIDRFLISKEWDVMFDNSRVSKQVRTIS

Query:  DHFPLLLEAGNFAWGPSPFRFFNSWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNW
        DH P+ L+     WGPSPFRF N WL   D  + ++L   +D++ GW G+   S+L+ LK  +K W
Subjt:  DHFPLLLEAGNFAWGPSPFRFFNSWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNW

XP_038904301.1 uncharacterized protein LOC120090656 [Benincasa hispida]1.6e-4751.1Show/hide
Query:  LWEELRSLLLYCEGPWCIGGDFNVTRWIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWSRPGDDSSQSLIDRFLISKEWDVMFDNSRVSKQVR
        +W EL SL    + PWCIG +FN  R  HER PV R TR M  FNK I    LLE PLS+G+FTWSR GD +S+SL+D FL+S  W+ +FDNSRV++Q R
Subjt:  LWEELRSLLLYCEGPWCIGGDFNVTRWIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWSRPGDDSSQSLIDRFLISKEWDVMFDNSRVSKQVR

Query:  TISDHFPLLLEAGNFAWGPSPFRFFNSWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNWFAVFEERGSRKKK
        T+SDHFPL LEAG F WGPS FRF NSWLN  +  K++E +L + +++ W    +++ LRK K ++K WF  F +    K++
Subjt:  TISDHFPLLLEAGNFAWGPSPFRFFNSWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNWFAVFEERGSRKKK

TrEMBL top hitse value%identityAlignment
A0A5D3BHE3 Uncharacterized protein5.7e-7551.18Show/hide
Query:  LLKTISNSKDVGWVNVKSWGRSGGLLVLWDESKLKIVEFLQGGYTLSIKVSFQQHKECWVTNVYGPNDYRERKFLWEELRSLLLYCEGPWCIGGDFNVTR
        L+K++ +SKD+GW  V+S+GR GG+L +WD SK+K+VE L+GGY+LSI       K CW+TNVYGP DY ER+F+W  L SL  YC G WCIGG  N+TR
Subjt:  LLKTISNSKDVGWVNVKSWGRSGGLLVLWDESKLKIVEFLQGGYTLSIKVSFQQHKECWVTNVYGPNDYRERKFLWEELRSLLLYCEGPWCIGGDFNVTR

Query:  WIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWSRPGDDSSQSLIDRFLISKEWDVMFDNSRVSKQVRTISDHFPLLLEAGNFAWGPSPFRFFN
        W HE  P+ + TRGMRQFN  ID L + ELPL +G+ TWSR G   S+SL+D F I KEWD + +NSRV ++  TISDHFPLLLEAG+  WGPSPFRF N
Subjt:  WIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWSRPGDDSSQSLIDRFLISKEWDVMFDNSRVSKQVRTISDHFPLLLEAGNFAWGPSPFRFFN

Query:  SWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNWFAVFEERGSRK
        SWL  ++C +I++   +      W GFV+     +   +    F   +  G  K
Subjt:  SWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNWFAVFEERGSRK

A0A5D3BKT8 LINE-1 retrotransposable element ORF2 protein1.4e-4922.73Show/hide
Query:  LLKFVETKPVENISKKSKYEVSSKQVNNTSKNLDRSYADMVRVNSGEPHFGSHTKKLPEISSFWVRKEKEVVDLK--------LDEFCVVSRMFAHNDWK
        L+ F  + P + I  + + E  S   ++ S + D S     +V S       + K+    S     +    +  K         ++  +++R   H+DW 
Subjt:  LLKFVETKPVENISKKSKYEVSSKQVNNTSKNLDRSYADMVRVNSGEPHFGSHTKKLPEISSFWVRKEKEVVDLK--------LDEFCVVSRMFAHNDWK

Query:  EVKQALENYFHSKVLLNPFMADKALVKLKDSSSKLKFDGK----WKLIGNFHLKIENWSCHKHFHPEVIEGYGGWIALKNLPLPFWNRFIFEIIGNHFGG
         +  +L           PF ADKA++ L    +KL    K    W  +GN+ +K E+W  + H    VI  YGGW+  + +PL  WN   F+ IG+  GG
Subjt:  EVKQALENYFHSKVLLNPFMADKALVKLKDSSSKLKFDGK----WKLIGNFHLKIENWSCHKHFHPEVIEGYGGWIALKNLPLPFWNRFIFEIIGNHFGG

Query:  LVSISSQTLNLLDCSEARMEVKRNFCGFLPAEIVVTDKIHGNFALRFGDISPLDPPRFIPMDLSLSDFDNEIDLKRVSQVRMDEEISSLQEDINSFNGQG
         + ++ +T+ +    +A+++V+ N+ GF+PA I++TD    NF +    + P +    +  ++ +         K   +      ++    +  ++NG  
Subjt:  LVSISSQTLNLLDCSEARMEVKRNFCGFLPAEIVVTDKIHGNFALRFGDISPLDPPRFIPMDLSLSDFDNEIDLKRVSQVRMDEEISSLQEDINSFNGQG

Query:  LNPPAKQNRVNQEISSSSKDPNGIFVECREIMNEGGLIIEESVELSKKKAELLQENTFNASVSCSKEALIEKDINANVSVIKDALIDGAVHESQELLFTP
          PP +  R + + S  + D +                I    +  K  +   + + F+  +S  +     K+    + +I D         S+ +    
Subjt:  LNPPAKQNRVNQEISSSSKDPNGIFVECREIMNEGGLIIEESVELSKKKAELLQENTFNASVSCSKEALIEKDINANVSVIKDALIDGAVHESQELLFTP

Query:  VYDPTSGLKRSNAAGFEENESSSKDPNDIMDDSLEKLNDGSSYLVNSVELLHENAFSDLVSRSKEALIKEINCNLIGPVEISKEKSVLLQERYFNANGKG
        V   + G  +SN++  E N                    G S  ++++    E  +S    ++K  L   I  +   P E +++ ++ L+E      G+G
Subjt:  VYDPTSGLKRSNAAGFEENESSSKDPNDIMDDSLEKLNDGSSYLVNSVELLHENAFSDLVSRSKEALIKEINCNLIGPVEISKEKSVLLQERYFNANGKG

Query:  INAIGSYIQGALTDGALNESQDLLLTPIHDQPSDLKSCNAAGLKENEQNVSKALKKKYESFPLHYSRRKCKKSDILDSIPINSNYNPDVIEESCSQFLLS
                        +N S D  + PI    S ++S N  G                                 LD++   +N  PD   +S       
Subjt:  INAIGSYIQGALTDGALNESQDLLLTPIHDQPSDLKSCNAAGLKENEQNVSKALKKKYESFPLHYSRRKCKKSDILDSIPINSNYNPDVIEESCSQFLLS

Query:  ALNQPRCCQTNLNELSNSTSSNQYILSNIQSNPSLTKGVFIPSSKVEIKVDQSYSSPIDSDDDSVVSISSVEAENQYLNDENNELLEEDSFAMAFNRIFQ
                 T+  E  N T S   +      N S ++     +SK             D+   S + I     E   +  + NEL     +         
Subjt:  ALNQPRCCQTNLNELSNSTSSNQYILSNIQSNPSLTKGVFIPSSKVEIKVDQSYSSPIDSDDDSVVSISSVEAENQYLNDENNELLEEDSFAMAFNRIFQ

Query:  NNDDASEVQLNACDVLATPLVSVPSKFSSLLEDCDIQLKEIQPFLPLLLKTISNSKDVGWVNVKSWGRSGGLLVLWDESKLKIVEFLQGGYTLSIKVSFQ
         ND                 V   S F  ++ D ++ +    P                       G  GG+LVLWD++K K+ +   G Y++S+ +   
Subjt:  NNDDASEVQLNACDVLATPLVSVPSKFSSLLEDCDIQLKEIQPFLPLLLKTISNSKDVGWVNVKSWGRSGGLLVLWDESKLKIVEFLQGGYTLSIKVSFQ

Query:  QHKECWVTNVYGPNDYRERKFLWEELRSLLLYCEGPWCIGGDFNVTRWIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWSRPGDDSSQSLIDR
         +   W+T+VYGP  Y +R  LW EL  L   C   W I GDFN+ RW  E    S   R M  FN  I    L++ PL +  FTWS    + + S +DR
Subjt:  QHKECWVTNVYGPNDYRERKFLWEELRSLLLYCEGPWCIGGDFNVTRWIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWSRPGDDSSQSLIDR

Query:  FLISKEWDVMFDNSRVSKQVRTISDHFPLLLEAGNFAWGPSPFRFFNSWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNW
        FL+SK W+  F         R ISDHFP+LLE+    WGP PFR  NS L   D  K      +  K  G+ G+     L  L   IK W
Subjt:  FLISKEWDVMFDNSRVSKQVRTISDHFPLLLEAGNFAWGPSPFRFFNSWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNW

A0A5E4F090 Reverse transcriptase domain-containing protein (Fragment)1.7e-4736.09Show/hide
Query:  QLKEIQPFLPLLLKT------------ISNSKDVGWVNVKSWGRSGGLLVLWDESKLKIVEFLQGGYTLSIKVSFQQHKECWVTNVYGPNDYRERKFLWE
        QL+ ++P + +LL+T            +  S+   WV   S GRSGG+ VLW+   + +++ + G +++SI++      + W++ +YGP   RER   WE
Subjt:  QLKEIQPFLPLLLKT------------ISNSKDVGWVNVKSWGRSGGLLVLWDESKLKIVEFLQGGYTLSIKVSFQQHKECWVTNVYGPNDYRERKFLWE

Query:  ELRSLLLYCEGPWCIGGDFNVTRWIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWSRPGDDSSQSLIDRFLISKEWDVMFDNSRVSKQVRTIS
        EL  L  YC   WC+GGDFNV R+  E+    R T+ MR FN  I E  L +  L +  FTWS   +++    +DRFL+S  W+  F + R     R  S
Subjt:  ELRSLLLYCEGPWCIGGDFNVTRWIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWSRPGDDSSQSLIDRFLISKEWDVMFDNSRVSKQVRTIS

Query:  DHFPLLLEAGNFAWGPSPFRFFNSWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNW
        DH P+ L+     WGPSPFRF N WL   D  + ++L   +D++ GW G+   S+L+ LK  +K W
Subjt:  DHFPLLLEAGNFAWGPSPFRFFNSWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNW

M5WJ76 Reverse transcriptase domain-containing protein (Fragment)7.7e-4836.09Show/hide
Query:  QLKEIQPFLPLLLKT------------ISNSKDVGWVNVKSWGRSGGLLVLWDESKLKIVEFLQGGYTLSIKVSFQQHKECWVTNVYGPNDYRERKFLWE
        QL+ ++P + +LL+T            +  S+   WV   S GRSGG+ VLW+   + +++ + G +++SI++      + W++ +YGP   RER   WE
Subjt:  QLKEIQPFLPLLLKT------------ISNSKDVGWVNVKSWGRSGGLLVLWDESKLKIVEFLQGGYTLSIKVSFQQHKECWVTNVYGPNDYRERKFLWE

Query:  ELRSLLLYCEGPWCIGGDFNVTRWIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWSRPGDDSSQSLIDRFLISKEWDVMFDNSRVSKQVRTIS
        EL  L  YC   WC+GGDFNV R+  E+    R T+ MR FN  I E  L +  L +  FTWS   +++    +DRFL+S  W+  F + R     R  S
Subjt:  ELRSLLLYCEGPWCIGGDFNVTRWIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWSRPGDDSSQSLIDRFLISKEWDVMFDNSRVSKQVRTIS

Query:  DHFPLLLEAGNFAWGPSPFRFFNSWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNW
        DH P+ L+     WGPSPFRF N WLN  D  + ++L   +D+  GW G+   ++L+ LK  +K W
Subjt:  DHFPLLLEAGNFAWGPSPFRFFNSWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNW

M5WPQ5 Reverse transcriptase domain-containing protein7.7e-4836.09Show/hide
Query:  QLKEIQPFLPLLLKT------------ISNSKDVGWVNVKSWGRSGGLLVLWDESKLKIVEFLQGGYTLSIKVSFQQHKECWVTNVYGPNDYRERKFLWE
        QL+ ++P + +LL+T            +  S+   WV   S GRSGG+ VLW+   + +++ + G +++SI++      + W++ +YGP   RER   WE
Subjt:  QLKEIQPFLPLLLKT------------ISNSKDVGWVNVKSWGRSGGLLVLWDESKLKIVEFLQGGYTLSIKVSFQQHKECWVTNVYGPNDYRERKFLWE

Query:  ELRSLLLYCEGPWCIGGDFNVTRWIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWSRPGDDSSQSLIDRFLISKEWDVMFDNSRVSKQVRTIS
        EL  L  YC   WC+GGDFNV R+  E+    R T+ MR FN  I E  L +  L +  FTWS   +++    +DRFL+S  W+  F + R     R  S
Subjt:  ELRSLLLYCEGPWCIGGDFNVTRWIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWSRPGDDSSQSLIDRFLISKEWDVMFDNSRVSKQVRTIS

Query:  DHFPLLLEAGNFAWGPSPFRFFNSWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNW
        DH P+ L++    WGPSPFRF N WLN  D  + ++L   +D+  GW G+   ++L+ LK  +K W
Subjt:  DHFPLLLEAGNFAWGPSPFRFFNSWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAGAAGCTTTCTTTTGAAATTTGTGGAAACAAAGCCTGTTGAGAATATTTCAAAGAAGTCTAAATATGAAGTATCATCCAAGCAGGTTAATAATACTAGTAAGAA
TTTGGATAGAAGTTATGCTGATATGGTGAGGGTTAACTCCGGGGAACCTCATTTCGGTTCTCACACTAAGAAGCTGCCAGAAATTTCTTCATTTTGGGTTAGAAAAGAAA
AAGAAGTGGTGGACTTAAAGCTAGATGAATTTTGTGTGGTATCTAGAATGTTTGCACATAATGATTGGAAGGAAGTAAAGCAAGCTTTGGAAAATTATTTTCATTCTAAG
GTTTTACTCAATCCTTTTATGGCCGATAAAGCTTTGGTAAAACTGAAAGATAGCTCTTCTAAGCTGAAATTTGATGGCAAATGGAAACTTATTGGAAACTTTCATTTGAA
AATTGAAAATTGGTCGTGTCACAAGCATTTTCATCCTGAGGTGATTGAAGGATATGGAGGTTGGATAGCCTTGAAGAACTTACCTTTGCCATTCTGGAATCGTTTCATTT
TTGAAATCATTGGAAATCACTTTGGTGGATTGGTTAGCATTTCTTCTCAAACATTGAATCTTTTAGATTGTTCAGAAGCTCGAATGGAGGTGAAAAGGAATTTTTGTGGA
TTTTTACCTGCTGAAATTGTGGTTACGGATAAGATTCATGGAAACTTTGCTCTTCGTTTTGGTGATATATCTCCTTTAGACCCTCCACGTTTTATTCCTATGGATTTATC
ATTGAGTGATTTTGATAATGAAATTGATTTAAAAAGAGTTTCCCAGGTTAGGATGGATGAAGAAATTTCCTCATTACAAGAAGATATTAATTCCTTCAATGGTCAAGGAC
TAAACCCTCCAGCCAAGCAAAATCGGGTAAATCAAGAAATCTCTTCATCTTCTAAAGACCCCAACGGCATTTTTGTTGAATGTAGGGAAATAATGAATGAGGGAGGTTTA
ATTATAGAAGAGTCGGTTGAATTATCAAAGAAAAAGGCTGAGTTGTTGCAAGAAAATACCTTTAATGCATCAGTTTCATGTTCCAAGGAAGCATTAATTGAAAAGGACAT
TAATGCAAATGTTTCAGTTATTAAGGATGCATTAATTGATGGTGCTGTGCATGAGTCCCAGGAGTTATTATTCACGCCTGTTTATGATCCTACTTCAGGTTTGAAGAGAA
GTAATGCTGCTGGTTTTGAAGAAAATGAATCATCTTCTAAAGATCCCAACGACATTATGGATGATTCACTGGAAAAATTGAATGATGGAAGTTCATATTTAGTAAATTCG
GTTGAGTTATTACACGAAAATGCCTTTAGTGACTTGGTTTCACGTTCCAAGGAAGCATTAATTAAAGAGATTAATTGTAATTTAATTGGGCCAGTTGAGATTTCAAAAGA
GAAGAGTGTTTTGTTGCAAGAAAGATATTTTAATGCCAACGGAAAGGGTATTAATGCCATCGGTTCATATATTCAAGGAGCTTTAACTGATGGAGCTTTGAATGAGTCCC
AGGATTTATTACTCACGCCTATTCATGACCAACCTTCGGATTTGAAGAGTTGTAATGCAGCTGGATTGAAAGAAAACGAACAGAATGTTTCTAAGGCTTTAAAGAAGAAA
TATGAATCATTTCCTCTTCATTATTCTCGAAGGAAATGTAAAAAGTCAGATATTTTGGACTCAATTCCCATTAATTCCAATTATAACCCTGATGTTATTGAAGAATCTTG
TTCTCAATTTTTGCTCTCTGCTTTGAATCAGCCTAGGTGCTGTCAAACTAATCTTAATGAGTTATCAAATTCCACTTCATCCAATCAGTACATTCTTTCAAACATTCAAT
CCAACCCTTCTTTAACAAAGGGGGTTTTTATTCCTTCATCCAAAGTTGAAATTAAAGTTGATCAATCATATTCATCTCCTATTGATTCTGATGATGATTCAGTGGTGAGT
ATTAGTAGTGTTGAGGCTGAAAATCAGTATTTGAATGATGAAAACAATGAATTATTGGAGGAAGACTCTTTTGCAATGGCTTTTAATCGGATTTTCCAGAATAATGATGA
TGCTTCTGAAGTTCAGTTGAATGCTTGTGATGTTTTGGCAACACCCTTAGTCTCGGTTCCAAGCAAATTTTCATCTCTTTTGGAAGATTGTGACATTCAGCTAAAGGAAA
TTCAACCTTTTTTACCCCTGTTATTAAAAACAATTAGCAACTCTAAAGATGTTGGTTGGGTTAATGTGAAATCTTGGGGAAGATCGGGAGGATTACTGGTTTTGTGGGAT
GAGAGCAAATTGAAAATTGTGGAATTTCTTCAAGGTGGTTATACTTTATCTATTAAAGTTTCTTTTCAGCAACATAAAGAATGTTGGGTAACAAATGTTTATGGTCCGAA
TGATTATAGAGAAAGAAAATTTCTGTGGGAAGAGTTGCGTTCTTTGCTTTTATATTGTGAAGGCCCCTGGTGTATAGGTGGAGATTTTAATGTGACCCGTTGGATTCATG
AAAGAATTCCAGTTAGTAGAGGAACAAGAGGGATGAGACAATTTAATAAGCTTATTGATGAATTAGGCTTATTAGAGTTGCCTTTATCCCATGGTAAATTTACATGGTCA
AGACCAGGGGATGATTCTTCTCAATCTCTTATCGACAGATTTCTGATTTCTAAGGAATGGGATGTGATGTTTGATAATTCTAGAGTCTCCAAACAGGTCCGTACTATTTC
TGATCATTTCCCTCTCCTTCTTGAAGCTGGTAATTTTGCATGGGGTCCATCCCCATTTCGGTTTTTTAATAGTTGGTTGAATATGGCTGATTGTACCAAAATTGTGGAGC
TTACTTTATCTCAAGATAAATCCTATGGCTGGGTTGGTTTTGTTATTGCTTCTAAGCTCAGAAAATTGAAAATCAGCATTAAAAATTGGTTTGCTGTGTTTGAAGAGAGA
GGAAGTAGAAAGAAAAAAGTCTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTAGAAGCTTTCTTTTGAAATTTGTGGAAACAAAGCCTGTTGAGAATATTTCAAAGAAGTCTAAATATGAAGTATCATCCAAGCAGGTTAATAATACTAGTAAGAA
TTTGGATAGAAGTTATGCTGATATGGTGAGGGTTAACTCCGGGGAACCTCATTTCGGTTCTCACACTAAGAAGCTGCCAGAAATTTCTTCATTTTGGGTTAGAAAAGAAA
AAGAAGTGGTGGACTTAAAGCTAGATGAATTTTGTGTGGTATCTAGAATGTTTGCACATAATGATTGGAAGGAAGTAAAGCAAGCTTTGGAAAATTATTTTCATTCTAAG
GTTTTACTCAATCCTTTTATGGCCGATAAAGCTTTGGTAAAACTGAAAGATAGCTCTTCTAAGCTGAAATTTGATGGCAAATGGAAACTTATTGGAAACTTTCATTTGAA
AATTGAAAATTGGTCGTGTCACAAGCATTTTCATCCTGAGGTGATTGAAGGATATGGAGGTTGGATAGCCTTGAAGAACTTACCTTTGCCATTCTGGAATCGTTTCATTT
TTGAAATCATTGGAAATCACTTTGGTGGATTGGTTAGCATTTCTTCTCAAACATTGAATCTTTTAGATTGTTCAGAAGCTCGAATGGAGGTGAAAAGGAATTTTTGTGGA
TTTTTACCTGCTGAAATTGTGGTTACGGATAAGATTCATGGAAACTTTGCTCTTCGTTTTGGTGATATATCTCCTTTAGACCCTCCACGTTTTATTCCTATGGATTTATC
ATTGAGTGATTTTGATAATGAAATTGATTTAAAAAGAGTTTCCCAGGTTAGGATGGATGAAGAAATTTCCTCATTACAAGAAGATATTAATTCCTTCAATGGTCAAGGAC
TAAACCCTCCAGCCAAGCAAAATCGGGTAAATCAAGAAATCTCTTCATCTTCTAAAGACCCCAACGGCATTTTTGTTGAATGTAGGGAAATAATGAATGAGGGAGGTTTA
ATTATAGAAGAGTCGGTTGAATTATCAAAGAAAAAGGCTGAGTTGTTGCAAGAAAATACCTTTAATGCATCAGTTTCATGTTCCAAGGAAGCATTAATTGAAAAGGACAT
TAATGCAAATGTTTCAGTTATTAAGGATGCATTAATTGATGGTGCTGTGCATGAGTCCCAGGAGTTATTATTCACGCCTGTTTATGATCCTACTTCAGGTTTGAAGAGAA
GTAATGCTGCTGGTTTTGAAGAAAATGAATCATCTTCTAAAGATCCCAACGACATTATGGATGATTCACTGGAAAAATTGAATGATGGAAGTTCATATTTAGTAAATTCG
GTTGAGTTATTACACGAAAATGCCTTTAGTGACTTGGTTTCACGTTCCAAGGAAGCATTAATTAAAGAGATTAATTGTAATTTAATTGGGCCAGTTGAGATTTCAAAAGA
GAAGAGTGTTTTGTTGCAAGAAAGATATTTTAATGCCAACGGAAAGGGTATTAATGCCATCGGTTCATATATTCAAGGAGCTTTAACTGATGGAGCTTTGAATGAGTCCC
AGGATTTATTACTCACGCCTATTCATGACCAACCTTCGGATTTGAAGAGTTGTAATGCAGCTGGATTGAAAGAAAACGAACAGAATGTTTCTAAGGCTTTAAAGAAGAAA
TATGAATCATTTCCTCTTCATTATTCTCGAAGGAAATGTAAAAAGTCAGATATTTTGGACTCAATTCCCATTAATTCCAATTATAACCCTGATGTTATTGAAGAATCTTG
TTCTCAATTTTTGCTCTCTGCTTTGAATCAGCCTAGGTGCTGTCAAACTAATCTTAATGAGTTATCAAATTCCACTTCATCCAATCAGTACATTCTTTCAAACATTCAAT
CCAACCCTTCTTTAACAAAGGGGGTTTTTATTCCTTCATCCAAAGTTGAAATTAAAGTTGATCAATCATATTCATCTCCTATTGATTCTGATGATGATTCAGTGGTGAGT
ATTAGTAGTGTTGAGGCTGAAAATCAGTATTTGAATGATGAAAACAATGAATTATTGGAGGAAGACTCTTTTGCAATGGCTTTTAATCGGATTTTCCAGAATAATGATGA
TGCTTCTGAAGTTCAGTTGAATGCTTGTGATGTTTTGGCAACACCCTTAGTCTCGGTTCCAAGCAAATTTTCATCTCTTTTGGAAGATTGTGACATTCAGCTAAAGGAAA
TTCAACCTTTTTTACCCCTGTTATTAAAAACAATTAGCAACTCTAAAGATGTTGGTTGGGTTAATGTGAAATCTTGGGGAAGATCGGGAGGATTACTGGTTTTGTGGGAT
GAGAGCAAATTGAAAATTGTGGAATTTCTTCAAGGTGGTTATACTTTATCTATTAAAGTTTCTTTTCAGCAACATAAAGAATGTTGGGTAACAAATGTTTATGGTCCGAA
TGATTATAGAGAAAGAAAATTTCTGTGGGAAGAGTTGCGTTCTTTGCTTTTATATTGTGAAGGCCCCTGGTGTATAGGTGGAGATTTTAATGTGACCCGTTGGATTCATG
AAAGAATTCCAGTTAGTAGAGGAACAAGAGGGATGAGACAATTTAATAAGCTTATTGATGAATTAGGCTTATTAGAGTTGCCTTTATCCCATGGTAAATTTACATGGTCA
AGACCAGGGGATGATTCTTCTCAATCTCTTATCGACAGATTTCTGATTTCTAAGGAATGGGATGTGATGTTTGATAATTCTAGAGTCTCCAAACAGGTCCGTACTATTTC
TGATCATTTCCCTCTCCTTCTTGAAGCTGGTAATTTTGCATGGGGTCCATCCCCATTTCGGTTTTTTAATAGTTGGTTGAATATGGCTGATTGTACCAAAATTGTGGAGC
TTACTTTATCTCAAGATAAATCCTATGGCTGGGTTGGTTTTGTTATTGCTTCTAAGCTCAGAAAATTGAAAATCAGCATTAAAAATTGGTTTGCTGTGTTTGAAGAGAGA
GGAAGTAGAAAGAAAAAAGTCTTTTAG
Protein sequenceShow/hide protein sequence
MIRSFLLKFVETKPVENISKKSKYEVSSKQVNNTSKNLDRSYADMVRVNSGEPHFGSHTKKLPEISSFWVRKEKEVVDLKLDEFCVVSRMFAHNDWKEVKQALENYFHSK
VLLNPFMADKALVKLKDSSSKLKFDGKWKLIGNFHLKIENWSCHKHFHPEVIEGYGGWIALKNLPLPFWNRFIFEIIGNHFGGLVSISSQTLNLLDCSEARMEVKRNFCG
FLPAEIVVTDKIHGNFALRFGDISPLDPPRFIPMDLSLSDFDNEIDLKRVSQVRMDEEISSLQEDINSFNGQGLNPPAKQNRVNQEISSSSKDPNGIFVECREIMNEGGL
IIEESVELSKKKAELLQENTFNASVSCSKEALIEKDINANVSVIKDALIDGAVHESQELLFTPVYDPTSGLKRSNAAGFEENESSSKDPNDIMDDSLEKLNDGSSYLVNS
VELLHENAFSDLVSRSKEALIKEINCNLIGPVEISKEKSVLLQERYFNANGKGINAIGSYIQGALTDGALNESQDLLLTPIHDQPSDLKSCNAAGLKENEQNVSKALKKK
YESFPLHYSRRKCKKSDILDSIPINSNYNPDVIEESCSQFLLSALNQPRCCQTNLNELSNSTSSNQYILSNIQSNPSLTKGVFIPSSKVEIKVDQSYSSPIDSDDDSVVS
ISSVEAENQYLNDENNELLEEDSFAMAFNRIFQNNDDASEVQLNACDVLATPLVSVPSKFSSLLEDCDIQLKEIQPFLPLLLKTISNSKDVGWVNVKSWGRSGGLLVLWD
ESKLKIVEFLQGGYTLSIKVSFQQHKECWVTNVYGPNDYRERKFLWEELRSLLLYCEGPWCIGGDFNVTRWIHERIPVSRGTRGMRQFNKLIDELGLLELPLSHGKFTWS
RPGDDSSQSLIDRFLISKEWDVMFDNSRVSKQVRTISDHFPLLLEAGNFAWGPSPFRFFNSWLNMADCTKIVELTLSQDKSYGWVGFVIASKLRKLKISIKNWFAVFEER
GSRKKKVF