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Spg006745 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006745
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein starmaker-like isoform X1
Genome locationscaffold1:54370112..54371376
RNA-Seq ExpressionSpg006745
SyntenySpg006745
Gene Ontology termsGO:0006281 - DNA repair (biological process)
GO:0007064 - mitotic sister chromatid cohesion (biological process)
GO:0009556 - microsporogenesis (biological process)
GO:0035825 - homologous recombination (biological process)
GO:0000785 - chromatin (cellular component)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR039776 - Sister chromatid cohesion protein Pds5


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7029481.1 Sister chromatid cohesion protein PDS5-like B-B [Cucurbita argyrosperma subsp. argyrosperma]4.6e-1977.5Show/hide
Query:  MQSVLTPSLKALVSDQLHRHLDIDVKVAV-ACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL
        MQS LTPSLKAL+SDQL RH DIDVKVAV ACI EITRIT    P     + EVFHLIVSSFENLSDKSSRSYA RASIL
Subjt:  MQSVLTPSLKALVSDQLHRHLDIDVKVAV-ACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL

XP_022961960.1 protein starmaker-like isoform X1 [Cucurbita moschata]4.6e-1977.5Show/hide
Query:  MQSVLTPSLKALVSDQLHRHLDIDVKVAV-ACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL
        MQS LTPSLKAL+SDQL RH DIDVKVAV ACI EITRIT    P     + EVFHLIVSSFENLSDKSSRSYA RASIL
Subjt:  MQSVLTPSLKALVSDQLHRHLDIDVKVAV-ACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL

XP_022996452.1 protein starmaker-like isoform X1 [Cucurbita maxima]4.6e-1977.5Show/hide
Query:  MQSVLTPSLKALVSDQLHRHLDIDVKVAVA-CIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL
        MQS LTPSLKAL+SDQL RH DIDVKVAVA CI EITRIT    P     + EVFHLIVSSFENLSDKSSRSYA RASIL
Subjt:  MQSVLTPSLKALVSDQLHRHLDIDVKVAVA-CIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL

XP_022996453.1 protein starmaker-like isoform X2 [Cucurbita maxima]4.6e-1977.5Show/hide
Query:  MQSVLTPSLKALVSDQLHRHLDIDVKVAVA-CIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL
        MQS LTPSLKAL+SDQL RH DIDVKVAVA CI EITRIT    P     + EVFHLIVSSFENLSDKSSRSYA RASIL
Subjt:  MQSVLTPSLKALVSDQLHRHLDIDVKVAVA-CIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL

XP_023545878.1 E3 ubiquitin-protein ligase RBBP6-like isoform X1 [Cucurbita pepo subsp. pepo]4.6e-1977.5Show/hide
Query:  MQSVLTPSLKALVSDQLHRHLDIDVKVAV-ACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL
        MQS LTPSLKAL+SDQL RH DIDVKVAV ACI EITRIT    P     + EVFHLIVSSFENLSDKSSRSYA RASIL
Subjt:  MQSVLTPSLKALVSDQLHRHLDIDVKVAV-ACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL

TrEMBL top hitse value%identityAlignment
A0A6J1HBT1 protein starmaker-like isoform X22.2e-1977.5Show/hide
Query:  MQSVLTPSLKALVSDQLHRHLDIDVKVAV-ACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL
        MQS LTPSLKAL+SDQL RH DIDVKVAV ACI EITRIT    P     + EVFHLIVSSFENLSDKSSRSYA RASIL
Subjt:  MQSVLTPSLKALVSDQLHRHLDIDVKVAV-ACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL

A0A6J1HDP8 protein starmaker-like isoform X12.2e-1977.5Show/hide
Query:  MQSVLTPSLKALVSDQLHRHLDIDVKVAV-ACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL
        MQS LTPSLKAL+SDQL RH DIDVKVAV ACI EITRIT    P     + EVFHLIVSSFENLSDKSSRSYA RASIL
Subjt:  MQSVLTPSLKALVSDQLHRHLDIDVKVAV-ACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL

A0A6J1K1Y9 protein starmaker-like isoform X12.2e-1977.5Show/hide
Query:  MQSVLTPSLKALVSDQLHRHLDIDVKVAVA-CIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL
        MQS LTPSLKAL+SDQL RH DIDVKVAVA CI EITRIT    P     + EVFHLIVSSFENLSDKSSRSYA RASIL
Subjt:  MQSVLTPSLKALVSDQLHRHLDIDVKVAVA-CIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL

A0A6J1KAT2 protein starmaker-like isoform X22.2e-1977.5Show/hide
Query:  MQSVLTPSLKALVSDQLHRHLDIDVKVAVA-CIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL
        MQS LTPSLKAL+SDQL RH DIDVKVAVA CI EITRIT    P     + EVFHLIVSSFENLSDKSSRSYA RASIL
Subjt:  MQSVLTPSLKALVSDQLHRHLDIDVKVAVA-CIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL

A0A6J1KIV6 protein starmaker-like isoform X16.4e-1977.5Show/hide
Query:  MQSVLTPSLKALVSDQLHRHLDIDVKVAV-ACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL
        MQS L PSLKALVSDQL RH DIDVKVAV ACI EITRIT    P     + EVFHLIVSSFENLSDKSSRSYA RASIL
Subjt:  MQSVLTPSLKALVSDQLHRHLDIDVKVAV-ACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G15940.1 Tudor/PWWP/MBT superfamily protein1.5e-0741.25Show/hide
Query:  MQSVLTPSLKALVSDQLHRHLDIDVKVA-VACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL
        +Q  L P ++ALVS  L R+ D DV+V+ V+C+ EI RIT    P     + ++F + + +FE L+D SSRSY     IL
Subjt:  MQSVLTPSLKALVSDQLHRHLDIDVKVA-VACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL

AT1G80810.1 Tudor/PWWP/MBT superfamily protein2.0e-0946.34Show/hide
Query:  MQSVLTPSLKALVSDQLHRHLDIDVKVA-VACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASILMN
        MQS L PS  ALVS  L  H D DV+V+ V+C+ EI RIT    P     + E+F L + +FE L+D SSRSY     +L N
Subjt:  MQSVLTPSLKALVSDQLHRHLDIDVKVA-VACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASILMN

AT1G80810.2 Tudor/PWWP/MBT superfamily protein2.0e-0946.34Show/hide
Query:  MQSVLTPSLKALVSDQLHRHLDIDVKVA-VACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASILMN
        MQS L PS  ALVS  L  H D DV+V+ V+C+ EI RIT    P     + E+F L + +FE L+D SSRSY     +L N
Subjt:  MQSVLTPSLKALVSDQLHRHLDIDVKVA-VACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASILMN

AT4G31880.1 LOCATED IN: cytosol, chloroplast1.3e-1662.5Show/hide
Query:  MQSVLTPSLKALVSDQLHRHLDIDVKVAV-ACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL
        MQ+ LTP +K LV  +L +H D+DVKVAV ACI EITRIT    P     + EVF LIVSSFE+L DKSSRSYA R SIL
Subjt:  MQSVLTPSLKALVSDQLHRHLDIDVKVAV-ACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL

AT4G31880.2 LOCATED IN: cytosol1.3e-1662.5Show/hide
Query:  MQSVLTPSLKALVSDQLHRHLDIDVKVAV-ACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL
        MQ+ LTP +K LV  +L +H D+DVKVAV ACI EITRIT    P     + EVF LIVSSFE+L DKSSRSYA R SIL
Subjt:  MQSVLTPSLKALVSDQLHRHLDIDVKVAV-ACIGEITRITLHLKP-----LTEVFHLIVSSFENLSDKSSRSYANRASIL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGTGTGCTCACTCCATCTTTGAAAGCACTGGTTTCTGATCAGCTTCATAGGCATTTGGACATCGATGTCAAAGTTGCAGTTGCATGCATTGGTGAAATAACTAG
GATCACACTGCACCTGAAGCCCCTTACAGAGGTATTTCATCTTATAGTATCATCCTTTGAAAATCTCTCTGACAAGTCAAGTCGATCATATGCAAATAGGGCATCCATTC
TTATGAATAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGTGTGCTCACTCCATCTTTGAAAGCACTGGTTTCTGATCAGCTTCATAGGCATTTGGACATCGATGTCAAAGTTGCAGTTGCATGCATTGGTGAAATAACTAG
GATCACACTGCACCTGAAGCCCCTTACAGAGGTATTTCATCTTATAGTATCATCCTTTGAAAATCTCTCTGACAAGTCAAGTCGATCATATGCAAATAGGGCATCCATTC
TTATGAATAATTGA
Protein sequenceShow/hide protein sequence
MQSVLTPSLKALVSDQLHRHLDIDVKVAVACIGEITRITLHLKPLTEVFHLIVSSFENLSDKSSRSYANRASILMNN