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Spg006768 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006768
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDNA-directed DNA polymerase
Genome locationscaffold1:55348793..55349850
RNA-Seq ExpressionSpg006768
SyntenySpg006768
Gene Ontology termsGO:0006261 - DNA-dependent DNA replication (biological process)
GO:0071897 - DNA biosynthetic process (biological process)
GO:0003677 - DNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038899891.1 DNA polymerase I isoform X1 [Benincasa hispida]1.4e-5685.21Show/hide
Query:  MVLMACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQ
        MVLMACHHLH+ATASASH+CRNFLGFIFTS+F +P R SSSSSSLRIQSL HHS PSFSVLLSPKGYC SSGSI+ ANTVDS +T+HGSSASSRSQQMLQ
Subjt:  MVLMACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQ

Query:  LQDSLSNSLTCKEETGIDTPSDARVMLIDGTSIIYRAYYKLL
         QDSLS+SLT KEETGI+ PSDARVMLIDGTS+IYRAYYKLL
Subjt:  LQDSLSNSLTCKEETGIDTPSDARVMLIDGTSIIYRAYYKLL

XP_038899892.1 DNA polymerase I isoform X2 [Benincasa hispida]1.4e-5685.21Show/hide
Query:  MVLMACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQ
        MVLMACHHLH+ATASASH+CRNFLGFIFTS+F +P R SSSSSSLRIQSL HHS PSFSVLLSPKGYC SSGSI+ ANTVDS +T+HGSSASSRSQQMLQ
Subjt:  MVLMACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQ

Query:  LQDSLSNSLTCKEETGIDTPSDARVMLIDGTSIIYRAYYKLL
         QDSLS+SLT KEETGI+ PSDARVMLIDGTS+IYRAYYKLL
Subjt:  LQDSLSNSLTCKEETGIDTPSDARVMLIDGTSIIYRAYYKLL

XP_038899895.1 DNA polymerase I isoform X4 [Benincasa hispida]1.4e-5685.21Show/hide
Query:  MVLMACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQ
        MVLMACHHLH+ATASASH+CRNFLGFIFTS+F +P R SSSSSSLRIQSL HHS PSFSVLLSPKGYC SSGSI+ ANTVDS +T+HGSSASSRSQQMLQ
Subjt:  MVLMACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQ

Query:  LQDSLSNSLTCKEETGIDTPSDARVMLIDGTSIIYRAYYKLL
         QDSLS+SLT KEETGI+ PSDARVMLIDGTS+IYRAYYKLL
Subjt:  LQDSLSNSLTCKEETGIDTPSDARVMLIDGTSIIYRAYYKLL

XP_038899896.1 DNA polymerase I isoform X5 [Benincasa hispida]1.4e-5685.21Show/hide
Query:  MVLMACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQ
        MVLMACHHLH+ATASASH+CRNFLGFIFTS+F +P R SSSSSSLRIQSL HHS PSFSVLLSPKGYC SSGSI+ ANTVDS +T+HGSSASSRSQQMLQ
Subjt:  MVLMACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQ

Query:  LQDSLSNSLTCKEETGIDTPSDARVMLIDGTSIIYRAYYKLL
         QDSLS+SLT KEETGI+ PSDARVMLIDGTS+IYRAYYKLL
Subjt:  LQDSLSNSLTCKEETGIDTPSDARVMLIDGTSIIYRAYYKLL

XP_038899897.1 DNA polymerase I isoform X6 [Benincasa hispida]1.4e-5685.21Show/hide
Query:  MVLMACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQ
        MVLMACHHLH+ATASASH+CRNFLGFIFTS+F +P R SSSSSSLRIQSL HHS PSFSVLLSPKGYC SSGSI+ ANTVDS +T+HGSSASSRSQQMLQ
Subjt:  MVLMACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQ

Query:  LQDSLSNSLTCKEETGIDTPSDARVMLIDGTSIIYRAYYKLL
         QDSLS+SLT KEETGI+ PSDARVMLIDGTS+IYRAYYKLL
Subjt:  LQDSLSNSLTCKEETGIDTPSDARVMLIDGTSIIYRAYYKLL

TrEMBL top hitse value%identityAlignment
A0A6J1D7Q6 DNA-directed DNA polymerase6.7e-5282.39Show/hide
Query:  MACHHLHS--ATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHG-SSASSRSQQMLQ
        MACHHLHS  ATA+ASH+CRNFLG+IFTSR+ASPLR  SSSSSL+IQSL+HHSFPSFS+L SPKGYC SSG +NAAN VDSN+TYHG SSASS+SQQMLQ
Subjt:  MACHHLHS--ATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHG-SSASSRSQQMLQ

Query:  LQDSLSNSLTCKEETGIDTPSDARVMLIDGTSIIYRAYYKLL
         QDSL NSL  KEE GID+PSDARVMLIDGTSIIYRAYYKLL
Subjt:  LQDSLSNSLTCKEETGIDTPSDARVMLIDGTSIIYRAYYKLL

A0A6J1D847 uncharacterized protein LOC111017796 isoform X26.7e-5282.39Show/hide
Query:  MACHHLHS--ATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHG-SSASSRSQQMLQ
        MACHHLHS  ATA+ASH+CRNFLG+IFTSR+ASPLR  SSSSSL+IQSL+HHSFPSFS+L SPKGYC SSG +NAAN VDSN+TYHG SSASS+SQQMLQ
Subjt:  MACHHLHS--ATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHG-SSASSRSQQMLQ

Query:  LQDSLSNSLTCKEETGIDTPSDARVMLIDGTSIIYRAYYKLL
         QDSL NSL  KEE GID+PSDARVMLIDGTSIIYRAYYKLL
Subjt:  LQDSLSNSLTCKEETGIDTPSDARVMLIDGTSIIYRAYYKLL

A0A6J1EY78 DNA-directed DNA polymerase9.4e-5484.17Show/hide
Query:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD
        MACHHLH+ATASASH+CRNFLG+IFTS+FASPLR SSSSSSLRIQS  HH FPSFSVLL PKGYC SS S+NAA  VDSN+TYHGS ASS SQQMLQ+QD
Subjt:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD

Query:  SLSNSLTCKEETGIDTPSDARVMLIDGTSIIYRAYYKLL
        SLSNS TCKEET ID PSDARVMLIDGTSIIYRAY+KLL
Subjt:  SLSNSLTCKEETGIDTPSDARVMLIDGTSIIYRAYYKLL

A0A6J1F3S3 DNA-directed DNA polymerase9.4e-5484.17Show/hide
Query:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD
        MACHHLH+ATASASH+CRNFLG+IFTS+FASPLR SSSSSSLRIQS  HH FPSFSVLL PKGYC SS S+NAA  VDSN+TYHGS ASS SQQMLQ+QD
Subjt:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD

Query:  SLSNSLTCKEETGIDTPSDARVMLIDGTSIIYRAYYKLL
        SLSNS TCKEET ID PSDARVMLIDGTSIIYRAY+KLL
Subjt:  SLSNSLTCKEETGIDTPSDARVMLIDGTSIIYRAYYKLL

A0A6J1HVF9 DNA-directed DNA polymerase8.5e-5584.89Show/hide
Query:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD
        MACHHLH+ATASASH+CRNFLG+IFTS+FASPLR SSSSSSLRIQS  HH FPSFSVLLSPKGYC SS S+NAA  VDSN+TYHGS ASS SQQMLQ+QD
Subjt:  MACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQD

Query:  SLSNSLTCKEETGIDTPSDARVMLIDGTSIIYRAYYKLL
        SLSNS TCKEET ID+PSDARVMLIDGTSIIYRAY+KLL
Subjt:  SLSNSLTCKEETGIDTPSDARVMLIDGTSIIYRAYYKLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCTCATGGCCTGCCACCATCTTCATAGTGCGACTGCTAGTGCATCTCATGTTTGCAGAAATTTTTTGGGATTCATTTTCACGTCCAGATTTGCTTCTCCTCTTCG
TTCCTCTTCCTCTTCTTCTTCTTTGAGGATACAATCTCTTGTTCACCATTCTTTTCCGTCTTTCTCCGTTCTGCTATCCCCGAAGGGATACTGTATTTCATCCGGAAGTA
TCAATGCTGCCAATACTGTAGATAGCAATTCAACTTATCATGGCAGTTCTGCATCTTCTAGAAGCCAGCAAATGCTGCAACTCCAAGATTCATTGTCAAATTCACTCACG
TGCAAAGAAGAAACTGGAATTGACACTCCTTCAGATGCCAGAGTCATGCTAATTGATGGCACATCAATCATTTATAGAGCATATTACAAGCTTTTGGGTATGGTTAGACT
TGTCAATCAGAACGTTATAATTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTCTCATGGCCTGCCACCATCTTCATAGTGCGACTGCTAGTGCATCTCATGTTTGCAGAAATTTTTTGGGATTCATTTTCACGTCCAGATTTGCTTCTCCTCTTCG
TTCCTCTTCCTCTTCTTCTTCTTTGAGGATACAATCTCTTGTTCACCATTCTTTTCCGTCTTTCTCCGTTCTGCTATCCCCGAAGGGATACTGTATTTCATCCGGAAGTA
TCAATGCTGCCAATACTGTAGATAGCAATTCAACTTATCATGGCAGTTCTGCATCTTCTAGAAGCCAGCAAATGCTGCAACTCCAAGATTCATTGTCAAATTCACTCACG
TGCAAAGAAGAAACTGGAATTGACACTCCTTCAGATGCCAGAGTCATGCTAATTGATGGCACATCAATCATTTATAGAGCATATTACAAGCTTTTGGGTATGGTTAGACT
TGTCAATCAGAACGTTATAATTTAA
Protein sequenceShow/hide protein sequence
MVLMACHHLHSATASASHVCRNFLGFIFTSRFASPLRSSSSSSSLRIQSLVHHSFPSFSVLLSPKGYCISSGSINAANTVDSNSTYHGSSASSRSQQMLQLQDSLSNSLT
CKEETGIDTPSDARVMLIDGTSIIYRAYYKLLGMVRLVNQNVII