; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006775 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006775
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold1:54986115..54994053
RNA-Seq ExpressionSpg006775
SyntenySpg006775
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.1e-2034.35Show/hide
Query:  IRFVNELARAKYREMLK-RDFLFERGFGED-------LPHFLRAGIANHGWSQF--------------------------FMVRGVAVDWSPGAINSLFN
        ++F  E A  +Y   ++ R    E+GF  D       LP F+   I  H W QF                            VRGV V WS  AIN++F 
Subjt:  IRFVNELARAKYREMLK-RDFLFERGFGED-------LPHFLRAGIANHGWSQF--------------------------FMVRGVAVDWSPGAINSLFN

Query:  LQDFL--HAGFNEMVVAPSNDKLNAAVREVGIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVFLLFAILHSLSIDVGKIIS
        L D +  H+ F E +   +   L   +  V + GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS+DR+ LL ++L   SI+VG++I 
Subjt:  LQDFL--HAGFNEMVVAPSNDKLNAAVREVGIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVFLLFAILHSLSIDVGKIIS

Query:  SEIYNCWRKKVGKLFLPNTITMLCSTAGVP
        SEI  C  +K G LF P+ IT LC  A  P
Subjt:  SEIYNCWRKKVGKLFLPNTITMLCSTAGVP

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]8.5e-2628.8Show/hide
Query:  IRFVNELARAKYREMLK-RDFLFERGFGED-------LPHFLRAGIANHGWSQF--------------------------FMVRGVAVDWSPGAINSLFN
        ++F  E A  +Y   ++ R    E+GF  D       LP F+   I  H W QF                            VRGV V WS  AIN++F 
Subjt:  IRFVNELARAKYREMLK-RDFLFERGFGED-------LPHFLRAGIANHGWSQF--------------------------FMVRGVAVDWSPGAINSLFN

Query:  LQDFLHAGFNEMVVAPSNDKLNAAVREVGIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVFLLFAILHSLSIDVGKIISSE
        L D +    +E +   +   L   +  V   GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS+DR+ LL ++L   SI+VG++I SE
Subjt:  LQDFLHAGFNEMVVAPSNDKLNAAVREVGIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVFLLFAILHSLSIDVGKIISSE

Query:  IYNCWRKKVGKLFLPNTITMLCSTAGVP---------------------------------------------TSPEDILEQLALSASR------QEY--
        I  C  +K G LF P+ IT LC  A  P                                              +  DIL+QL     R      Q+Y  
Subjt:  IYNCWRKKVGKLFLPNTITMLCSTAGVP---------------------------------------------TSPEDILEQLALSASR------QEY--

Query:  ------AERQDQTYWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDLFNPWIPPPPVEREEEEEDEQEYNAERLE
                +Q Q +W Y+K RD  L++ALQ+NF++P   FP FP ++         ++ E E E +++ + E  E
Subjt:  ------AERQDQTYWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDLFNPWIPPPPVEREEEEEDEQEYNAERLE

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]5.0e-1830.13Show/hide
Query:  IRFVNELARAKYRE-------MLKRDFLFERGFGEDLPHFLRAGIANHGWSQF--------------------------FMVRGVAVDWSPGAINSLFNL
        ++F ++ A  +Y E        ++++F+++     + P F+   I  H W  F                            +RGV V  S  AIN++F+L
Subjt:  IRFVNELARAKYRE-------MLKRDFLFERGFGEDLPHFLRAGIANHGWSQF--------------------------FMVRGVAVDWSPGAINSLFNL

Query:  QDFL--HAGFNEMVVAPSNDKLNAAVREVGIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVFLLFAILHSLSIDVGKIISS
         D +  H+ F E +  P   +L   +  V I GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS++ V LL+++L   SI+VG++I  
Subjt:  QDFL--HAGFNEMVVAPSNDKLNAAVREVGIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVFLLFAILHSLSIDVGKIISS

Query:  EIYNCWRKKVGKLFLPNTITMLCSTAGVP
        EI  C  +K G LF P+ IT +C     P
Subjt:  EIYNCWRKKVGKLFLPNTITMLCSTAGVP

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]2.6e-2732.62Show/hide
Query:  VRGVAVDWSPGAINSLFNLQDFL--HAGFNEMVVAPSNDKLNAAVREVGIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVF
        VRGV V WS  AIN++F L D +  H+ F E +  P   +L   +  V   GA+W +S     T   + L   A  W  F+K  LLPTTH   VS+DR+ 
Subjt:  VRGVAVDWSPGAINSLFNLQDFL--HAGFNEMVVAPSNDKLNAAVREVGIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVF

Query:  LLFAILHSLSIDVGKIISSEIYNCWRKKVGKLFLPNTITMLCSTAGVPTSPE-------------------------------------------DILEQ
        LL ++L+  SI+VG++I SEI  C  +K G LF P+ IT LC  A    + E                                           D+L+Q
Subjt:  LLFAILHSLSIDVGKIISSEIYNCWRKKVGKLFLPNTITMLCSTAGVPTSPE-------------------------------------------DILEQ

Query:  LAL---SASRQEYAERQDQTYWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDLFNPWIPPPPVEREEEEEDEQEYNAERLE
        L       S+QE+  +Q Q +W Y+K RD  L++ALQ+NF++P   FP FP ++         ++ E E E +++ + E  E
Subjt:  LAL---SASRQEYAERQDQTYWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDLFNPWIPPPPVEREEEEEDEQEYNAERLE

XP_024971944.1 uncharacterized protein LOC112510826 [Cynara cardunculus var. scolymus]2.6e-1937.66Show/hide
Query:  VRGVAVDWSPGAINSLFNLQDFLHAGFNEMVVAPSNDKLNAAVREVGIEGAQWRL-SKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVFL
        VRGV V     AIN L  L       F  +  + S  KL    RE+G  G +W   S    RT++A+ LK  AN W+ FI+  L PTTHDS++S +++ L
Subjt:  VRGVAVDWSPGAINSLFNLQDFLHAGFNEMVVAPSNDKLNAAVREVGIEGAQWRL-SKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVFL

Query:  LFAILHSLSIDVGKIISSEIYNCWRKKVGKLFLPNTITMLCSTAGVPTSPEDIL
        L+ ++   +I+VGK++   I  C +++ GKLF P+ I  L   AGVP   +D++
Subjt:  LFAILHSLSIDVGKIISSEIYNCWRKKVGKLFLPNTITMLCSTAGVPTSPEDIL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)5.2e-2134.35Show/hide
Query:  IRFVNELARAKYREMLK-RDFLFERGFGED-------LPHFLRAGIANHGWSQF--------------------------FMVRGVAVDWSPGAINSLFN
        ++F  E A  +Y   ++ R    E+GF  D       LP F+   I  H W QF                            VRGV V WS  AIN++F 
Subjt:  IRFVNELARAKYREMLK-RDFLFERGFGED-------LPHFLRAGIANHGWSQF--------------------------FMVRGVAVDWSPGAINSLFN

Query:  LQDFL--HAGFNEMVVAPSNDKLNAAVREVGIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVFLLFAILHSLSIDVGKIIS
        L D +  H+ F E +   +   L   +  V + GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS+DR+ LL ++L   SI+VG++I 
Subjt:  LQDFL--HAGFNEMVVAPSNDKLNAAVREVGIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVFLLFAILHSLSIDVGKIIS

Query:  SEIYNCWRKKVGKLFLPNTITMLCSTAGVP
        SEI  C  +K G LF P+ IT LC  A  P
Subjt:  SEIYNCWRKKVGKLFLPNTITMLCSTAGVP

A0A2P5BCG4 Uncharacterized protein (Fragment)4.1e-2628.8Show/hide
Query:  IRFVNELARAKYREMLK-RDFLFERGFGED-------LPHFLRAGIANHGWSQF--------------------------FMVRGVAVDWSPGAINSLFN
        ++F  E A  +Y   ++ R    E+GF  D       LP F+   I  H W QF                            VRGV V WS  AIN++F 
Subjt:  IRFVNELARAKYREMLK-RDFLFERGFGED-------LPHFLRAGIANHGWSQF--------------------------FMVRGVAVDWSPGAINSLFN

Query:  LQDFLHAGFNEMVVAPSNDKLNAAVREVGIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVFLLFAILHSLSIDVGKIISSE
        L D +    +E +   +   L   +  V   GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS+DR+ LL ++L   SI+VG++I SE
Subjt:  LQDFLHAGFNEMVVAPSNDKLNAAVREVGIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVFLLFAILHSLSIDVGKIISSE

Query:  IYNCWRKKVGKLFLPNTITMLCSTAGVP---------------------------------------------TSPEDILEQLALSASR------QEY--
        I  C  +K G LF P+ IT LC  A  P                                              +  DIL+QL     R      Q+Y  
Subjt:  IYNCWRKKVGKLFLPNTITMLCSTAGVP---------------------------------------------TSPEDILEQLALSASR------QEY--

Query:  ------AERQDQTYWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDLFNPWIPPPPVEREEEEEDEQEYNAERLE
                +Q Q +W Y+K RD  L++ALQ+NF++P   FP FP ++         ++ E E E +++ + E  E
Subjt:  ------AERQDQTYWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDLFNPWIPPPPVEREEEEEDEQEYNAERLE

A0A2P5DAQ2 Uncharacterized protein2.4e-1830.13Show/hide
Query:  IRFVNELARAKYRE-------MLKRDFLFERGFGEDLPHFLRAGIANHGWSQF--------------------------FMVRGVAVDWSPGAINSLFNL
        ++F ++ A  +Y E        ++++F+++     + P F+   I  H W  F                            +RGV V  S  AIN++F+L
Subjt:  IRFVNELARAKYRE-------MLKRDFLFERGFGEDLPHFLRAGIANHGWSQF--------------------------FMVRGVAVDWSPGAINSLFNL

Query:  QDFL--HAGFNEMVVAPSNDKLNAAVREVGIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVFLLFAILHSLSIDVGKIISS
         D +  H+ F E +  P   +L   +  V I GA+W +S     T   + L   A  W  F+K  LLPTTH  TVS++ V LL+++L   SI+VG++I  
Subjt:  QDFL--HAGFNEMVVAPSNDKLNAAVREVGIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVFLLFAILHSLSIDVGKIISS

Query:  EIYNCWRKKVGKLFLPNTITMLCSTAGVP
        EI  C  +K G LF P+ IT +C     P
Subjt:  EIYNCWRKKVGKLFLPNTITMLCSTAGVP

A0A2P5DXM3 Uncharacterized protein1.3e-2732.62Show/hide
Query:  VRGVAVDWSPGAINSLFNLQDFL--HAGFNEMVVAPSNDKLNAAVREVGIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVF
        VRGV V WS  AIN++F L D +  H+ F E +  P   +L   +  V   GA+W +S     T   + L   A  W  F+K  LLPTTH   VS+DR+ 
Subjt:  VRGVAVDWSPGAINSLFNLQDFL--HAGFNEMVVAPSNDKLNAAVREVGIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVF

Query:  LLFAILHSLSIDVGKIISSEIYNCWRKKVGKLFLPNTITMLCSTAGVPTSPE-------------------------------------------DILEQ
        LL ++L+  SI+VG++I SEI  C  +K G LF P+ IT LC  A    + E                                           D+L+Q
Subjt:  LLFAILHSLSIDVGKIISSEIYNCWRKKVGKLFLPNTITMLCSTAGVPTSPE-------------------------------------------DILEQ

Query:  LAL---SASRQEYAERQDQTYWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDLFNPWIPPPPVEREEEEEDEQEYNAERLE
        L       S+QE+  +Q Q +W Y+K RD  L++ALQ+NF++P   FP FP ++         ++ E E E +++ + E  E
Subjt:  LAL---SASRQEYAERQDQTYWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDLFNPWIPPPPVEREEEEEDEQEYNAERLE

A0A5D2MA47 Uncharacterized protein2.4e-1838.51Show/hide
Query:  MVRGVAVDWSPGAINSLFNLQDFLHAGFNEMVVAPSNDKLNAAVREVGIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVFL
        +VR   V  +  +IN LFNL D     +  M+   + D L   +  V   G+QW + K    + +  YLK  AN W  F++   +P +H  T+S +R+ L
Subjt:  MVRGVAVDWSPGAINSLFNLQDFLHAGFNEMVVAPSNDKLNAAVREVGIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVFL

Query:  LFAILHSLSIDVGKIISSEIYNCWRKKVGKLFLPNTITMLCSTAGVPT
        L+AIL   SI+VGKII  EI+NC +KK G ++ P+ IT LC  A V T
Subjt:  LFAILHSLSIDVGKIISSEIYNCWRKKVGKLFLPNTITMLCSTAGVPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCTGGTAGAGTATAATGCTGAGCGACTTCAGGGAGCAAAAATCTGTGATCCAGTAAAGCAAGGAGCAAAATTGCCACATAAGCTCCGATATGAATCACTTCTTAG
TTTCAGGAATGATTTGAGAAGTAATTTGCATGGAAGATCTGGTGCTTCCACATGTCGCGTAGGGAAATCGAACGGTAGAGCCGTTGGACAGCACACCATTAAAAAGGTTG
TAAGAAAAGTAGTGGAAGACATTGCTGATGAAGTGGTTGAGGAAGAACAACCAAAGGAACCTGAGGAAAAAGATCCTGAACAAAGTGAGCCGGTAGTTGAAAATCCGCAA
GAAGTGACAGATACTCCATCGCCGTCGACGACAGAATCTGAGAAAGAAAACTTTGAAAAAGAAGCAAAAGAGAAAAAGGGGACAAAGGACCAGGAAAGAGAAGAAACAAA
AAAGAAGGTAGAGGAAGAAACTTTAACGAAGCATCAAGAAGACAGGGGCAAGGGAGTTGCCGAAGCAACAGATGAAGCAGAAGAGGAAGAAGCAGGAATGCCGTTTATTC
GCTTCGTCAATGAACTTGCCAGAGCAAAGTACAGAGAGATGCTGAAAAGGGATTTCCTATTTGAAAGAGGCTTCGGTGAAGATTTACCGCATTTCTTGAGGGCTGGAATA
GCAAATCATGGGTGGAGTCAATTCTTCATGGTCCGAGGGGTGGCTGTCGATTGGAGCCCAGGAGCAATAAATTCTCTCTTCAACCTCCAAGATTTTCTGCATGCTGGATT
TAATGAGATGGTGGTGGCACCATCTAACGATAAATTGAACGCGGCTGTTAGGGAGGTTGGCATTGAAGGGGCCCAATGGAGGTTGTCGAAGACGGAGAAGCGCACGTTTC
AAGCGACTTATTTGAAGAGTGAGGCTAACACATGGTTGGGCTTCATAAAACTGTGCTTGCTTCCGACAACCCACGACTCGACAGTATCCCAGGACAGAGTGTTTCTGTTA
TTTGCTATTCTGCATTCTTTGAGTATCGATGTTGGAAAAATTATTTCGAGTGAAATTTACAATTGCTGGCGTAAGAAGGTGGGAAAGTTGTTCTTACCAAACACGATTAC
AATGTTATGCAGTACGGCAGGAGTGCCCACGAGTCCAGAGGATATTTTAGAGCAACTGGCACTGTCAGCCAGTAGGCAAGAGTATGCTGAAAGGCAAGATCAAACCTACT
GGACTTATGCTAAACGGAGGGATGCCACACTTAGGAGGGCTTTGCAATCCAATTTCTCAAAACCTTATCAAGCCTTCCCTGTTTTCCCCGATGACCTGTTTAATCCCTGG
ATTCCACCGCCGCCAGTAGAAAGAGAAGAAGAGGAGGAAGATGAGCAGGAGTATAATGCTGAGCGACTTGAGGGAGCAAAAATCTGTGATCCAGTAAAGCAAAGAGCAAA
ACTGCCACGTGTGAGTTTGGTGCATGAGCGATCCGCCTGGGGTAAGGTTCGAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCTGGTAGAGTATAATGCTGAGCGACTTCAGGGAGCAAAAATCTGTGATCCAGTAAAGCAAGGAGCAAAATTGCCACATAAGCTCCGATATGAATCACTTCTTAG
TTTCAGGAATGATTTGAGAAGTAATTTGCATGGAAGATCTGGTGCTTCCACATGTCGCGTAGGGAAATCGAACGGTAGAGCCGTTGGACAGCACACCATTAAAAAGGTTG
TAAGAAAAGTAGTGGAAGACATTGCTGATGAAGTGGTTGAGGAAGAACAACCAAAGGAACCTGAGGAAAAAGATCCTGAACAAAGTGAGCCGGTAGTTGAAAATCCGCAA
GAAGTGACAGATACTCCATCGCCGTCGACGACAGAATCTGAGAAAGAAAACTTTGAAAAAGAAGCAAAAGAGAAAAAGGGGACAAAGGACCAGGAAAGAGAAGAAACAAA
AAAGAAGGTAGAGGAAGAAACTTTAACGAAGCATCAAGAAGACAGGGGCAAGGGAGTTGCCGAAGCAACAGATGAAGCAGAAGAGGAAGAAGCAGGAATGCCGTTTATTC
GCTTCGTCAATGAACTTGCCAGAGCAAAGTACAGAGAGATGCTGAAAAGGGATTTCCTATTTGAAAGAGGCTTCGGTGAAGATTTACCGCATTTCTTGAGGGCTGGAATA
GCAAATCATGGGTGGAGTCAATTCTTCATGGTCCGAGGGGTGGCTGTCGATTGGAGCCCAGGAGCAATAAATTCTCTCTTCAACCTCCAAGATTTTCTGCATGCTGGATT
TAATGAGATGGTGGTGGCACCATCTAACGATAAATTGAACGCGGCTGTTAGGGAGGTTGGCATTGAAGGGGCCCAATGGAGGTTGTCGAAGACGGAGAAGCGCACGTTTC
AAGCGACTTATTTGAAGAGTGAGGCTAACACATGGTTGGGCTTCATAAAACTGTGCTTGCTTCCGACAACCCACGACTCGACAGTATCCCAGGACAGAGTGTTTCTGTTA
TTTGCTATTCTGCATTCTTTGAGTATCGATGTTGGAAAAATTATTTCGAGTGAAATTTACAATTGCTGGCGTAAGAAGGTGGGAAAGTTGTTCTTACCAAACACGATTAC
AATGTTATGCAGTACGGCAGGAGTGCCCACGAGTCCAGAGGATATTTTAGAGCAACTGGCACTGTCAGCCAGTAGGCAAGAGTATGCTGAAAGGCAAGATCAAACCTACT
GGACTTATGCTAAACGGAGGGATGCCACACTTAGGAGGGCTTTGCAATCCAATTTCTCAAAACCTTATCAAGCCTTCCCTGTTTTCCCCGATGACCTGTTTAATCCCTGG
ATTCCACCGCCGCCAGTAGAAAGAGAAGAAGAGGAGGAAGATGAGCAGGAGTATAATGCTGAGCGACTTGAGGGAGCAAAAATCTGTGATCCAGTAAAGCAAAGAGCAAA
ACTGCCACGTGTGAGTTTGGTGCATGAGCGATCCGCCTGGGGTAAGGTTCGAGCTTGA
Protein sequenceShow/hide protein sequence
MVLVEYNAERLQGAKICDPVKQGAKLPHKLRYESLLSFRNDLRSNLHGRSGASTCRVGKSNGRAVGQHTIKKVVRKVVEDIADEVVEEEQPKEPEEKDPEQSEPVVENPQ
EVTDTPSPSTTESEKENFEKEAKEKKGTKDQEREETKKKVEEETLTKHQEDRGKGVAEATDEAEEEEAGMPFIRFVNELARAKYREMLKRDFLFERGFGEDLPHFLRAGI
ANHGWSQFFMVRGVAVDWSPGAINSLFNLQDFLHAGFNEMVVAPSNDKLNAAVREVGIEGAQWRLSKTEKRTFQATYLKSEANTWLGFIKLCLLPTTHDSTVSQDRVFLL
FAILHSLSIDVGKIISSEIYNCWRKKVGKLFLPNTITMLCSTAGVPTSPEDILEQLALSASRQEYAERQDQTYWTYAKRRDATLRRALQSNFSKPYQAFPVFPDDLFNPW
IPPPPVEREEEEEDEQEYNAERLEGAKICDPVKQRAKLPRVSLVHERSAWGKVRA