; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006780 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006780
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold1:54753738..54758969
RNA-Seq ExpressionSpg006780
SyntenySpg006780
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022142767.1 uncharacterized protein LOC111012805 [Momordica charantia]3.7e-2645Show/hide
Query:  EETLQVEGYSDGAALVAITVGLEDERLLNSIGKNQPRTYVEFVSMAQKYMSAKELLRSKRSEREHKRHSSFDQDRKKDKKQRTDDGGRG-RAHPFGKFEK
        +E LQVEG +D  +L+A   G+ DE L  S GK  P T+ E +S AQ+YMSA E   SKR     +     ++   K +  R +   R  +  P  KFEK
Subjt:  EETLQVEGYSDGAALVAITVGLEDERLLNSIGKNQPRTYVEFVSMAQKYMSAKELLRSKRSEREHKRHSSFDQDRKKDKKQRTDDGGRG-RAHPFGKFEK

Query:  YTPTVILQEQVLMEIRNTGLLKFPRRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDDV
        YT T +  EQVLMEI+N  LLK+P RM ++  KR K ++CLFHWDHGH+T++C  LK++V
Subjt:  YTPTVILQEQVLMEIRNTGLLKFPRRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDDV

XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]4.8e-2648.21Show/hide
Query:  EETLQVEGYSDGAALVAITVGLEDERLLNSIGKNQPRTYVEFVSMAQKYMSAKELLRSKRSEREHKRHSSFDQDRKKDKKQRTDDGGRGRA---HPFGKF
        EE LQVEG +D  +L+A   G+ DE L  S GK  P T+ E +S AQ+YMSA E   SKR E + KR +   ++R  DK Q +    R R+    P  KF
Subjt:  EETLQVEGYSDGAALVAITVGLEDERLLNSIGKNQPRTYVEFVSMAQKYMSAKELLRSKRSEREHKRHSSFDQDRKKDKKQRTDDGGRGRA---HPFGKF

Query:  EKYTPTVILQEQVLMEIRNTGLLKFPRRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDDVATSSRR
        EKYTPT +  EQVLMEI++  LLK+P RMK++  KR K ++CLFH DHGH+T++C  LK++V    RR
Subjt:  EKYTPTVILQEQVLMEIRNTGLLKFPRRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDDVATSSRR

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]1.0e-2044.83Show/hide
Query:  GLEDERLLNSIGKNQPRTYVEFVSMAQKYMSAKEL------LRSKRSEREHKRHSSFDQDRKKDKKQRTDDGGRGRAHPFGKFEKYTPTVILQEQVLMEI
        G++DE L  S GK  P T+ E +S AQKYMSA+E       L  KR++++ +R        K +K+ R      G+     KFEKYTPT +  EQVLMEI
Subjt:  GLEDERLLNSIGKNQPRTYVEFVSMAQKYMSAKEL------LRSKRSEREHKRHSSFDQDRKKDKKQRTDDGGRGRAHPFGKFEKYTPTVILQEQVLMEI

Query:  RNTGLLKFPRRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDDV
        ++  LLK+P  MK+ P+KR K ++CLFH DHGH+T +C  LK++V
Subjt:  RNTGLLKFPRRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDDV

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]5.5e-2245.24Show/hide
Query:  EETLQVEGYSDGAALVAITVGLEDERLLNSIGKNQPRTYVEFVSMAQKYMSAKELLRSKRSEREHKRHSSFDQDRKKDKKQRTDDGGRGRA---HPFGKF
        +E LQ+E  +D  +L+A   G+ DE L  S GK  P T+ E +S AQ+YMSA E   SKR E + KR +   ++R  DK Q +    R R+    P  KF
Subjt:  EETLQVEGYSDGAALVAITVGLEDERLLNSIGKNQPRTYVEFVSMAQKYMSAKELLRSKRSEREHKRHSSFDQDRKKDKKQRTDDGGRGRA---HPFGKF

Query:  EKYTPTVILQEQVLMEIRNTGLLKFPRRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDDVATSSRR
        EKYTPT +  EQVLMEI++  LLK+P RMK    KR K ++CLFH DH H+T++   LK++V    RR
Subjt:  EKYTPTVILQEQVLMEIRNTGLLKFPRRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDDVATSSRR

XP_024042801.1 uncharacterized protein LOC112099618 [Citrus clementina]1.5e-1936.84Show/hide
Query:  EETLQVEGYSDGAALVAITVGLEDERLLNSIGKNQPRTYVEFVSMAQKYMSAKELLRSKRSERE------HKRHSSFDQDRKKDKKQRTDDGGRGRAHPF
        +E ++VE YSD  AL  I VGL+  +   S+ KN  RT+ E +S AQKY +  EL  +KR           KR    +Q + K+K  R +   +G     
Subjt:  EETLQVEGYSDGAALVAITVGLEDERLLNSIGKNQPRTYVEFVSMAQKYMSAKELLRSKRSERE------HKRHSSFDQDRKKDKKQRTDDGGRGRAHPF

Query:  GKFEKYTPTVILQEQVLMEIRNTGLLKFPRRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDDVATSSRR
         +F +YTP  + +EQVLM+IRN  LL+ P+ +K  P++RD+S++C +H DH H+  +C  LK+++ +  +R
Subjt:  GKFEKYTPTVILQEQVLMEIRNTGLLKFPRRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDDVATSSRR

TrEMBL top hitse value%identityAlignment
A0A6J1CNT2 uncharacterized protein LOC1110128051.8e-2645Show/hide
Query:  EETLQVEGYSDGAALVAITVGLEDERLLNSIGKNQPRTYVEFVSMAQKYMSAKELLRSKRSEREHKRHSSFDQDRKKDKKQRTDDGGRG-RAHPFGKFEK
        +E LQVEG +D  +L+A   G+ DE L  S GK  P T+ E +S AQ+YMSA E   SKR     +     ++   K +  R +   R  +  P  KFEK
Subjt:  EETLQVEGYSDGAALVAITVGLEDERLLNSIGKNQPRTYVEFVSMAQKYMSAKELLRSKRSEREHKRHSSFDQDRKKDKKQRTDDGGRG-RAHPFGKFEK

Query:  YTPTVILQEQVLMEIRNTGLLKFPRRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDDV
        YT T +  EQVLMEI+N  LLK+P RM ++  KR K ++CLFHWDHGH+T++C  LK++V
Subjt:  YTPTVILQEQVLMEIRNTGLLKFPRRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDDV

A0A6J1DWY0 uncharacterized protein LOC1110252932.3e-2648.21Show/hide
Query:  EETLQVEGYSDGAALVAITVGLEDERLLNSIGKNQPRTYVEFVSMAQKYMSAKELLRSKRSEREHKRHSSFDQDRKKDKKQRTDDGGRGRA---HPFGKF
        EE LQVEG +D  +L+A   G+ DE L  S GK  P T+ E +S AQ+YMSA E   SKR E + KR +   ++R  DK Q +    R R+    P  KF
Subjt:  EETLQVEGYSDGAALVAITVGLEDERLLNSIGKNQPRTYVEFVSMAQKYMSAKELLRSKRSEREHKRHSSFDQDRKKDKKQRTDDGGRGRA---HPFGKF

Query:  EKYTPTVILQEQVLMEIRNTGLLKFPRRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDDVATSSRR
        EKYTPT +  EQVLMEI++  LLK+P RMK++  KR K ++CLFH DHGH+T++C  LK++V    RR
Subjt:  EKYTPTVILQEQVLMEIRNTGLLKFPRRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDDVATSSRR

A0A6J1DYL6 uncharacterized protein LOC1110257852.7e-2245.24Show/hide
Query:  EETLQVEGYSDGAALVAITVGLEDERLLNSIGKNQPRTYVEFVSMAQKYMSAKELLRSKRSEREHKRHSSFDQDRKKDKKQRTDDGGRGRA---HPFGKF
        +E LQ+E  +D  +L+A   G+ DE L  S GK  P T+ E +S AQ+YMSA E   SKR E + KR +   ++R  DK Q +    R R+    P  KF
Subjt:  EETLQVEGYSDGAALVAITVGLEDERLLNSIGKNQPRTYVEFVSMAQKYMSAKELLRSKRSEREHKRHSSFDQDRKKDKKQRTDDGGRGRA---HPFGKF

Query:  EKYTPTVILQEQVLMEIRNTGLLKFPRRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDDVATSSRR
        EKYTPT +  EQVLMEI++  LLK+P RMK    KR K ++CLFH DH H+T++   LK++V    RR
Subjt:  EKYTPTVILQEQVLMEIRNTGLLKFPRRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDDVATSSRR

A0A6J1DZ52 uncharacterized protein LOC1110256125.0e-2144.83Show/hide
Query:  GLEDERLLNSIGKNQPRTYVEFVSMAQKYMSAKEL------LRSKRSEREHKRHSSFDQDRKKDKKQRTDDGGRGRAHPFGKFEKYTPTVILQEQVLMEI
        G++DE L  S GK  P T+ E +S AQKYMSA+E       L  KR++++ +R        K +K+ R      G+     KFEKYTPT +  EQVLMEI
Subjt:  GLEDERLLNSIGKNQPRTYVEFVSMAQKYMSAKEL------LRSKRSEREHKRHSSFDQDRKKDKKQRTDDGGRGRAHPFGKFEKYTPTVILQEQVLMEI

Query:  RNTGLLKFPRRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDDV
        ++  LLK+P  MK+ P+KR K ++CLFH DHGH+T +C  LK++V
Subjt:  RNTGLLKFPRRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDDV

A0A6J1E1B3 uncharacterized protein LOC1110255212.6e-1735.39Show/hide
Query:  EETLQVEGYSDGAALVAITVGLEDERLLNSIGKNQPRTYVEFVSMAQKYMSAKELLRSKRSEREHK-------RHSSFDQDRKKDK---------KQRTD
        EE L+V   SD +A+     GL DE L   +G+  P T+ E +  A+K +  +ELLR+K    E K       +       + KDK           R  
Subjt:  EETLQVEGYSDGAALVAITVGLEDERLLNSIGKNQPRTYVEFVSMAQKYMSAKELLRSKRSEREHK-------RHSSFDQDRKKDK---------KQRTD

Query:  DGGRGRAHPFGKFEKYTPTVILQEQVLMEIRNTG---LLKFPRRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDDV
        D  R R+ P   +E+YTPT I   ++L  I  TG   LLK P++++ +P+KR+K ++C FH DHGH+T NC +LK  +
Subjt:  DGGRGRAHPFGKFEKYTPTVILQEQVLMEIRNTG---LLKFPRRMKSNPDKRDKSQHCLFHWDHGHSTRNCIQLKDDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCCACATCCGCCGTGCCGACGACCTTCTTCCGCCGCTCTGTCGAGACTTCTGCTCGCCCCACATCCTCCATCGATTCTTCTTCTGCCGAGGACTGTACAATTTCTC
AGAAATTCAAACTAAGGAAGAAGTTGACGCAAGCGCCGATACGAGGGAAGACCATTCTATTGAAGACGATTACTCCTCAAGCGATAGCGGAGACGAAGGAGATAGCAAGA
AAAAGAAAACGGTAGACAAAAAGGATGCGAAGAGACCTAAAGGGAAGGACAGACGGACAAAAAGGGATGAAAGTGAGGAGGTCAAACCCACCAGAGCGCCCCACTCGTCT
TCATCTCAATTCGCCAGCCTTCATCTCCCTCGTCAGCCTTCGGTTTCATCTCCTTTCGCCAGTTCGCCTTCAGCCTTCGACCTTCGCCTTCACCAGTTCGCCTTCATCTC
CCTCGTGGACGATTCATCTACCAACTCAAAGACACTACCAGGAAGTGGACCCCGGAGGAGATGTGCAAAAGGAATTGGGCCAAGGCCTAAAACCATTGGACTTGGCCTCG
ACCTAGTCGGCCCACTTTGGTGGGTCGAGTCTTCTCCCCTTCGCTTGGTCCCTGGCATCCTAGCATCAGAGGCGTGTGGCAAGCACCACACCGGTGTGTCGGTTTACCTT
GTCTTGCAGGCGTCTTCCCCCTTTCATGCAAATTTACCGTTGGTGTCACATGAAGGTCAGAACCTTCAGAAAATAACCGCAATCCGCAGAGGTCACGAGAAGAAAATCAC
TCGCAGAGATCGCAAGAAGAAGGTCAAGGTCGGCCTCGGTACCCTCGACCTTCATCCTGAGAGAGCCAGACTGATGTCAAAATTGCTGTCCTTGAGGACAAAAATGGCCA
AAGCTTCCGAGGTCGAGGCCAAAGTTGTCGAGGCCGAGGAAACACTTCAAGTAGAAGGATACAGTGATGGGGCGGCCCTGGTAGCAATAACCGTTGGACTGGAAGATGAG
AGACTGCTTAATTCGATAGGTAAGAACCAACCTCGAACCTATGTTGAGTTTGTTTCCATGGCCCAGAAGTACATGAGCGCAAAAGAGCTGTTGAGATCAAAGAGGTCAGA
ACGAGAGCACAAGAGGCATTCCTCATTCGACCAGGACAGGAAGAAGGACAAAAAACAGCGGACAGACGATGGTGGCCGAGGCAGAGCACATCCCTTTGGCAAGTTTGAGA
AATACACGCCAACTGTTATCCTGCAAGAGCAAGTTCTGATGGAGATCCGAAACACGGGACTTCTTAAATTCCCAAGGAGAATGAAGTCAAATCCCGATAAAAGAGACAAG
AGCCAGCACTGCCTTTTCCATTGGGACCATGGGCATTCAACCAGAAACTGTATTCAGTTGAAGGATGATGTCGCAACGTCATCGCGACGCAGAGCGGCCGACGTCCTTTC
CTAA
mRNA sequenceShow/hide mRNA sequence
ATGACCCACATCCGCCGTGCCGACGACCTTCTTCCGCCGCTCTGTCGAGACTTCTGCTCGCCCCACATCCTCCATCGATTCTTCTTCTGCCGAGGACTGTACAATTTCTC
AGAAATTCAAACTAAGGAAGAAGTTGACGCAAGCGCCGATACGAGGGAAGACCATTCTATTGAAGACGATTACTCCTCAAGCGATAGCGGAGACGAAGGAGATAGCAAGA
AAAAGAAAACGGTAGACAAAAAGGATGCGAAGAGACCTAAAGGGAAGGACAGACGGACAAAAAGGGATGAAAGTGAGGAGGTCAAACCCACCAGAGCGCCCCACTCGTCT
TCATCTCAATTCGCCAGCCTTCATCTCCCTCGTCAGCCTTCGGTTTCATCTCCTTTCGCCAGTTCGCCTTCAGCCTTCGACCTTCGCCTTCACCAGTTCGCCTTCATCTC
CCTCGTGGACGATTCATCTACCAACTCAAAGACACTACCAGGAAGTGGACCCCGGAGGAGATGTGCAAAAGGAATTGGGCCAAGGCCTAAAACCATTGGACTTGGCCTCG
ACCTAGTCGGCCCACTTTGGTGGGTCGAGTCTTCTCCCCTTCGCTTGGTCCCTGGCATCCTAGCATCAGAGGCGTGTGGCAAGCACCACACCGGTGTGTCGGTTTACCTT
GTCTTGCAGGCGTCTTCCCCCTTTCATGCAAATTTACCGTTGGTGTCACATGAAGGTCAGAACCTTCAGAAAATAACCGCAATCCGCAGAGGTCACGAGAAGAAAATCAC
TCGCAGAGATCGCAAGAAGAAGGTCAAGGTCGGCCTCGGTACCCTCGACCTTCATCCTGAGAGAGCCAGACTGATGTCAAAATTGCTGTCCTTGAGGACAAAAATGGCCA
AAGCTTCCGAGGTCGAGGCCAAAGTTGTCGAGGCCGAGGAAACACTTCAAGTAGAAGGATACAGTGATGGGGCGGCCCTGGTAGCAATAACCGTTGGACTGGAAGATGAG
AGACTGCTTAATTCGATAGGTAAGAACCAACCTCGAACCTATGTTGAGTTTGTTTCCATGGCCCAGAAGTACATGAGCGCAAAAGAGCTGTTGAGATCAAAGAGGTCAGA
ACGAGAGCACAAGAGGCATTCCTCATTCGACCAGGACAGGAAGAAGGACAAAAAACAGCGGACAGACGATGGTGGCCGAGGCAGAGCACATCCCTTTGGCAAGTTTGAGA
AATACACGCCAACTGTTATCCTGCAAGAGCAAGTTCTGATGGAGATCCGAAACACGGGACTTCTTAAATTCCCAAGGAGAATGAAGTCAAATCCCGATAAAAGAGACAAG
AGCCAGCACTGCCTTTTCCATTGGGACCATGGGCATTCAACCAGAAACTGTATTCAGTTGAAGGATGATGTCGCAACGTCATCGCGACGCAGAGCGGCCGACGTCCTTTC
CTAA
Protein sequenceShow/hide protein sequence
MTHIRRADDLLPPLCRDFCSPHILHRFFFCRGLYNFSEIQTKEEVDASADTREDHSIEDDYSSSDSGDEGDSKKKKTVDKKDAKRPKGKDRRTKRDESEEVKPTRAPHSS
SSQFASLHLPRQPSVSSPFASSPSAFDLRLHQFAFISLVDDSSTNSKTLPGSGPRRRCAKGIGPRPKTIGLGLDLVGPLWWVESSPLRLVPGILASEACGKHHTGVSVYL
VLQASSPFHANLPLVSHEGQNLQKITAIRRGHEKKITRRDRKKKVKVGLGTLDLHPERARLMSKLLSLRTKMAKASEVEAKVVEAEETLQVEGYSDGAALVAITVGLEDE
RLLNSIGKNQPRTYVEFVSMAQKYMSAKELLRSKRSEREHKRHSSFDQDRKKDKKQRTDDGGRGRAHPFGKFEKYTPTVILQEQVLMEIRNTGLLKFPRRMKSNPDKRDK
SQHCLFHWDHGHSTRNCIQLKDDVATSSRRRAADVLS