CuGenDBv2

Gene ID	Spg006786
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Translation factor GUF1 homolog, chloroplastic
Genome location	scaffold1:56451507..56453980
RNA-Seq Expression	Spg006786
Synteny	Spg006786
Gene Ontology terms	GO:0006414 - translational elongation (biological process) GO:0045727 - positive regulation of translation (biological process) GO:0005743 - mitochondrial inner membrane (cellular component) GO:0005759 - mitochondrial matrix (cellular component) GO:0009507 - chloroplast (cellular component) GO:0003746 - translation elongation factor activity (molecular function) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function) GO:0043022 - ribosome binding (molecular function)
InterPro domains	IPR006297 - Elongation factor 4 IPR013842 - GTP-binding protein LepA, C-terminal IPR038363 - LepA, C-terminal domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

CAD6248041.1 unnamed protein product [Miscanthus lutarioriparius]

8.1e-28

59.69

Show/hide

Query:  LVEVTGRSYRVVGCRLHSHEASESSVRSYSRIILKSMASGVHVSNAEVDIVNDIWNCSKACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAE
        L E+ G  +  +  R   + + E S+  Y    L  +   + ++   V+ ++ I +  KACIG+KVIASE LSAIRKDVL+KCYGGDITRKKKLL+KQAE
Subjt:  LVEVTGRSYRVVGCRLHSHEASESSVRSYSRIILKSMASGVHVSNAEVDIVNDIWNCSKACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAE

Query:  GKKRMKAIGRVDVPQEAFMAVLKLEKEVL
        GKKRMKAIGRVDVPQEAFMAVLKLEKEVL
Subjt:  GKKRMKAIGRVDVPQEAFMAVLKLEKEVL

KAG6595718.1 Translation factor GUF1-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

3.1e-27

97.18

Show/hide

Query:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
        +ACIGSKVIASET+SAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
Subjt:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL

XP_008449438.1 PREDICTED: translation factor GUF1 homolog, chloroplastic [Cucumis melo]

3.1e-27

97.18

Show/hide

Query:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
        +ACIGSKVIASET+SAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
Subjt:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL

XP_022925039.1 translation factor GUF1 homolog, chloroplastic [Cucurbita moschata]

3.1e-27

97.18

Show/hide

Query:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
        +ACIGSKVIASET+SAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
Subjt:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL

XP_023518730.1 translation factor GUF1 homolog, chloroplastic [Cucurbita pepo subsp. pepo]

3.1e-27

97.18

Show/hide

Query:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
        +ACIGSKVIASET+SAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
Subjt:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KYH8 Translation factor GUF1 homolog, mitochondrial

1.9e-27

95.77

Show/hide

Query:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
        +ACIGSK+IASET+SAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
Subjt:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL

A0A1S3BMN9 Translation factor GUF1 homolog, chloroplastic

1.5e-27

97.18

Show/hide

Query:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
        +ACIGSKVIASET+SAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
Subjt:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL

A0A5A7V5D5 Translation factor GUF1 homolog, mitochondrial

1.5e-27

97.18

Show/hide

Query:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
        +ACIGSKVIASET+SAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
Subjt:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL

A0A6J1EAZ6 Translation factor GUF1 homolog, chloroplastic

1.5e-27

97.18

Show/hide

Query:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
        +ACIGSKVIASET+SAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
Subjt:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL

A0A6J1HRW4 Translation factor GUF1 homolog, chloroplastic

1.5e-27

97.18

Show/hide

Query:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
        +ACIGSKVIASET+SAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
Subjt:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL

SwissProt top hits

e value

%identity

Alignment

A5B4D2 Translation factor GUF1 homolog, chloroplastic

1.7e-28

91.55

Show/hide

Query:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
        +ACIG+KVIASE+LSAIRKDVL+KCYGGDITRKKKLL+KQAEGKKRMKAIG+VDVPQEAFMAVLKLEKEVL
Subjt:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL

B8AI54 Translation factor GUF1 homolog, chloroplastic

2.9e-28

91.55

Show/hide

Query:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
        +ACIG+KVIASE LSAIRKDVL+KCYGGDI+RKKKLL+KQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
Subjt:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL

B9F2U5 Translation factor GUF1 homolog, chloroplastic

2.9e-28

91.55

Show/hide

Query:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
        +ACIG+KVIASE LSAIRKDVL+KCYGGDI+RKKKLL+KQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
Subjt:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL

B9GHA6 Translation factor GUF1 homolog, chloroplastic

1.1e-27

90.14

Show/hide

Query:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
        +ACIG+KVIASE+LSAIRKDVLAKCYGGDI+RKKKLL+KQA GKKRMKAIG+VDVPQEAFMAVLKLEKEVL
Subjt:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL

Q9FNM5 Translation factor GUF1 homolog, chloroplastic

6.4e-28

91.55

Show/hide

Query:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
        +ACIGSKVIASE LSAIRKDVLAKCYGGDI+RKKKLL+KQA GKKRMKAIGRVDVPQEAFMAVLKLE+EVL
Subjt:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL

Arabidopsis top hits

e value

%identity

Alignment

AT5G08650.1 Small GTP-binding protein

4.6e-29

91.55

Show/hide

Query:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL
        +ACIGSKVIASE LSAIRKDVLAKCYGGDI+RKKKLL+KQA GKKRMKAIGRVDVPQEAFMAVLKLE+EVL
Subjt:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL

AT5G39900.1 Small GTP-binding protein

7.8e-21

71.21

Show/hide

Query:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKL
        +A IGSK+IA +T+SA+RK+VLAKCYGGDITRKKKLL KQ EGKKRMK +G VD+P EAF  +LK+
Subjt:  KACIGSKVIASETLSAIRKDVLAKCYGGDITRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCCAGAGGCGCTAGCCAATCGGTCGCGAGTTGGTGGGTGGTGCGAGTTGACAGACGGCGGCAACTTGTAGAGGTGACTGGTCGTAGTTACAGAGTCGTGGGTTGTAG
GTTGCATTCTCACGAGGCGTCTGAGAGTAGTGTTAGGTCTTACAGTAGAATTATTCTCAAGTCTATGGCTTCAGGTGTTCACGTCTCAAATGCAGAGGTTGATATAGTGA
ATGACATTTGGAACTGCTCAAAGGCATGTATTGGCTCTAAAGTGATTGCTAGTGAAACTCTATCGGCAATTAGAAAGGATGTCCTTGCCAAATGCTACGGTGGAGATATT
ACGAGGAAGAAGAAATTGCTTAGGAAACAGGCTGAAGGAAAGAAGAGGATGAAAGCGATTGGAAGAGTTGATGTACCTCAAGAAGCTTTTATGGCTGTTTTGAAGCTTGA
AAAAGAGGTTTTGTAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MARGASQSVASWWVVRVDRRRQLVEVTGRSYRVVGCRLHSHEASESSVRSYSRIILKSMASGVHVSNAEVDIVNDIWNCSKACIGSKVIASETLSAIRKDVLAKCYGGDI
TRKKKLLRKQAEGKKRMKAIGRVDVPQEAFMAVLKLEKEVL

Spg006786 (gene) of Sponge gourd (cylindrica) v1 genome