; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006790 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006790
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationscaffold1:54937099..54938950
RNA-Seq ExpressionSpg006790
SyntenySpg006790
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB49850.1 hypothetical protein L484_000844 [Morus notabilis]3.4e-1129.61Show/hide
Query:  FAKRPRTS-----SMDASSAAPPTST----PVKPKFKSPKAPKNLFPEVFKDVNFQEKMEIMRKRDFLNEKGF-SNRAGTL--PDFVTKVITQYKWQEFC
        FAKRP +S     ++D ++AA P+S+        KF    A K     ++              R+ + EKGF  + + TL  P F++ VI    WQ FC
Subjt:  FAKRPRTS-----SMDASSAAPPTST----PVKPKFKSPKAPKNLFPEVFKDVNFQEKMEIMRKRDFLNEKGF-SNRAGTL--PDFVTKVITQYKWQEFC

Query:  VHPQEVVVPLVREFYPRLREESMS--------------------------------MTVVRGKMMKEALKMVANKGVQWKESQTKVKTLVPSDLKPESAV
         HP + +VPLV+EFY  L+ +  +                                +T    + +KE LK +A  G QW  S     T    +L+P + V
Subjt:  VHPQEVVVPLVREFYPRLREESMS--------------------------------MTVVRGKMMKEALKMVANKGVQWKESQTKVKTLVPSDLKPESAV

Query:  WLHFIKNRRIPKTHDSTISVERVMLLYSIMKGK
        W HF+ +R +  TH  TIS  R +LLY+++ GK
Subjt:  WLHFIKNRRIPKTHDSTISVERVMLLYSIMKGK

EXB53755.1 hypothetical protein L484_022412 [Morus notabilis]4.0e-1230.87Show/hide
Query:  PDFVTKVITQYKWQEFCVHPQEVVVPLVREFYPRLREESMSMTVVRG--------------------------------KMMKEALKMVANKGVQWKESQ
        P F+T+VI Q+ W++FC HP   +VPLVREFY  L + +     V+                                 + ++  L  VA +G  W+ S 
Subjt:  PDFVTKVITQYKWQEFCVHPQEVVVPLVREFYPRLREESMSMTVVRG--------------------------------KMMKEALKMVANKGVQWKESQ

Query:  TKVKTLVPSDLKPESAVWLHFIKNRRIPKTHDSTISVERVMLLYSIMKG
            T +  +LK  + +W HF+  R +P TH  T++ +RV+LLYSI+ G
Subjt:  TKVKTLVPSDLKPESAVWLHFIKNRRIPKTHDSTISVERVMLLYSIMKG

PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]7.9e-1632.95Show/hide
Query:  MRKRDFLNEKGF----SNRAGTLPDFVTKVITQYKWQEFCVHPQEVVVPLVREFYPRLREESMSMTVVRGKMMK--------------------------
        ++ R    EKGF    S   G LP F+ +VITQ+ W++FC HP++ +VPLVREFY  L +   +   VRG  +                           
Subjt:  MRKRDFLNEKGF----SNRAGTLPDFVTKVITQYKWQEFCVHPQEVVVPLVREFYPRLREESMSMTVVRGKMMK--------------------------

Query:  ------EALKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRRIPKTHDSTISVERVMLLYSIMKGK
                L+ VA  G +W  S     T + S L P + VW HF+K+  +P TH  T+S +R++LL+S++ GK
Subjt:  ------EALKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRRIPKTHDSTISVERVMLLYSIMKGK

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]1.2e-1633.53Show/hide
Query:  MRKRDFLNEKGF----SNRAGTLPDFVTKVITQYKWQEFCVHPQEVVVPLVREFYPRLREESMSMTVVRGKMMK--------------------------
        ++ R    EKGF    S   G LP F+ +VITQ+ W++FC HP++ +VPLVREFY  L +   +   VRG  +                           
Subjt:  MRKRDFLNEKGF----SNRAGTLPDFVTKVITQYKWQEFCVHPQEVVVPLVREFYPRLREESMSMTVVRGKMMK--------------------------

Query:  ------EALKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRRIPKTHDSTISVERVMLLYSIMKGK
                L+ VA  G +W  S     T + S L P + VW HF+K+R +P TH  T+S +R++LL+S++ GK
Subjt:  ------EALKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRRIPKTHDSTISVERVMLLYSIMKGK

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]3.3e-1432.28Show/hide
Query:  KDVNFQEKM------EIMRKRDFLNEKGF---SNRAGTLPDFVTKVITQYKWQEFCVHPQEVVVPLVREFYPRLREESMSMTVVRG---KMMKEA-----
        K V F+ K       E ++ R    EK F   +++    P F+  VI Q+ WQ FC HP++ +VPLVREFY  +         +RG    +  EA     
Subjt:  KDVNFQEKM------EIMRKRDFLNEKGF---SNRAGTLPDFVTKVITQYKWQEFCVHPQEVVVPLVREFYPRLREESMSMTVVRG---KMMKEA-----

Query:  ------------------------LKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRRIPKTHDSTISVERVMLLYSIMKGK
                                L+ VA  G +W  S     T + S L P + VW HF+K+R +P TH  T+S E V LLYS++ GK
Subjt:  ------------------------LKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRRIPKTHDSTISVERVMLLYSIMKGK

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)3.8e-1632.95Show/hide
Query:  MRKRDFLNEKGF----SNRAGTLPDFVTKVITQYKWQEFCVHPQEVVVPLVREFYPRLREESMSMTVVRGKMMK--------------------------
        ++ R    EKGF    S   G LP F+ +VITQ+ W++FC HP++ +VPLVREFY  L +   +   VRG  +                           
Subjt:  MRKRDFLNEKGF----SNRAGTLPDFVTKVITQYKWQEFCVHPQEVVVPLVREFYPRLREESMSMTVVRGKMMK--------------------------

Query:  ------EALKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRRIPKTHDSTISVERVMLLYSIMKGK
                L+ VA  G +W  S     T + S L P + VW HF+K+  +P TH  T+S +R++LL+S++ GK
Subjt:  ------EALKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRRIPKTHDSTISVERVMLLYSIMKGK

A0A2P5BCG4 Uncharacterized protein (Fragment)5.9e-1733.53Show/hide
Query:  MRKRDFLNEKGF----SNRAGTLPDFVTKVITQYKWQEFCVHPQEVVVPLVREFYPRLREESMSMTVVRGKMMK--------------------------
        ++ R    EKGF    S   G LP F+ +VITQ+ W++FC HP++ +VPLVREFY  L +   +   VRG  +                           
Subjt:  MRKRDFLNEKGF----SNRAGTLPDFVTKVITQYKWQEFCVHPQEVVVPLVREFYPRLREESMSMTVVRGKMMK--------------------------

Query:  ------EALKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRRIPKTHDSTISVERVMLLYSIMKGK
                L+ VA  G +W  S     T + S L P + VW HF+K+R +P TH  T+S +R++LL+S++ GK
Subjt:  ------EALKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRRIPKTHDSTISVERVMLLYSIMKGK

A0A2P5DAQ2 Uncharacterized protein1.6e-1432.28Show/hide
Query:  KDVNFQEKM------EIMRKRDFLNEKGF---SNRAGTLPDFVTKVITQYKWQEFCVHPQEVVVPLVREFYPRLREESMSMTVVRG---KMMKEA-----
        K V F+ K       E ++ R    EK F   +++    P F+  VI Q+ WQ FC HP++ +VPLVREFY  +         +RG    +  EA     
Subjt:  KDVNFQEKM------EIMRKRDFLNEKGF---SNRAGTLPDFVTKVITQYKWQEFCVHPQEVVVPLVREFYPRLREESMSMTVVRG---KMMKEA-----

Query:  ------------------------LKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRRIPKTHDSTISVERVMLLYSIMKGK
                                L+ VA  G +W  S     T + S L P + VW HF+K+R +P TH  T+S E V LLYS++ GK
Subjt:  ------------------------LKMVANKGVQWKESQTKVKTLVPSDLKPESAVWLHFIKNRRIPKTHDSTISVERVMLLYSIMKGK

W9QTD9 Uncharacterized protein2.0e-1230.87Show/hide
Query:  PDFVTKVITQYKWQEFCVHPQEVVVPLVREFYPRLREESMSMTVVRG--------------------------------KMMKEALKMVANKGVQWKESQ
        P F+T+VI Q+ W++FC HP   +VPLVREFY  L + +     V+                                 + ++  L  VA +G  W+ S 
Subjt:  PDFVTKVITQYKWQEFCVHPQEVVVPLVREFYPRLREESMSMTVVRG--------------------------------KMMKEALKMVANKGVQWKESQ

Query:  TKVKTLVPSDLKPESAVWLHFIKNRRIPKTHDSTISVERVMLLYSIMKG
            T +  +LK  + +W HF+  R +P TH  T++ +RV+LLYSI+ G
Subjt:  TKVKTLVPSDLKPESAVWLHFIKNRRIPKTHDSTISVERVMLLYSIMKG

W9RBS1 Uncharacterized protein1.7e-1129.61Show/hide
Query:  FAKRPRTS-----SMDASSAAPPTST----PVKPKFKSPKAPKNLFPEVFKDVNFQEKMEIMRKRDFLNEKGF-SNRAGTL--PDFVTKVITQYKWQEFC
        FAKRP +S     ++D ++AA P+S+        KF    A K     ++              R+ + EKGF  + + TL  P F++ VI    WQ FC
Subjt:  FAKRPRTS-----SMDASSAAPPTST----PVKPKFKSPKAPKNLFPEVFKDVNFQEKMEIMRKRDFLNEKGF-SNRAGTL--PDFVTKVITQYKWQEFC

Query:  VHPQEVVVPLVREFYPRLREESMS--------------------------------MTVVRGKMMKEALKMVANKGVQWKESQTKVKTLVPSDLKPESAV
         HP + +VPLV+EFY  L+ +  +                                +T    + +KE LK +A  G QW  S     T    +L+P + V
Subjt:  VHPQEVVVPLVREFYPRLREESMS--------------------------------MTVVRGKMMKEALKMVANKGVQWKESQTKVKTLVPSDLKPESAV

Query:  WLHFIKNRRIPKTHDSTISVERVMLLYSIMKGK
        W HF+ +R +  TH  TIS  R +LLY+++ GK
Subjt:  WLHFIKNRRIPKTHDSTISVERVMLLYSIMKGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGCAAGAAGATGAGTTTGCAAGAAAAAGGAACTTGGAAGAGGAAAAAGAAGTTGAGAAAAAGAAGGAAGAAGAAAAACAAGAGGCCGAGAGGGCCATTCAAGCTGA
AAAAGAGAGAAAAGAAGAAAAAGAACTCAGGAGAGTGGCTGCTGACCTCCACCTCCTCAAGCAAGAAAAAGAAAGAAGAGAAAATTTGAAAGAAGAAGAACCAAGAAGAA
AAGAGGCTGAAGTGAGGTTGAACAGTTGCAAGAAGTTGAAGAAGAGGCCCTTGAAGGACCAAGAAGGCCAAGAGAAGGCCAATGAAGAAGGCCAAGTTAATGAGGCCCTT
GACCCGCTGTTTGACTATGACATTAGGGGACCTCCACTAGCTGCTGATAGTACCTCTTTGGAAGAGAAGAAGAATGAAGAGAAAATTGAAAAAGAGGAGGTCGGGACCTC
CAATGAATCAGAAATTGAGTCAAATTCTAAGATAAAGGAATTGGATGATGACCAAATTCCTATCTCTGCAGCTTTGAGGAAGAAAAGAAGAAGAGAACTGAGAGCCGAGA
GGAGGACCAATAACAAAAATGACCCTATTTTTGCCAAGAGGCCGAGGACAAGTTCCATGGACGCCTCTTCTGCAGCTCCTCCTACCTCCACACCTGTCAAACCGAAATTC
AAATCACCTAAAGCTCCAAAGAATCTGTTTCCTGAAGTCTTCAAGGATGTCAATTTCCAAGAGAAGATGGAAATTATGAGAAAAAGAGACTTTCTGAACGAGAAGGGATT
CTCCAACAGAGCAGGGACCTTGCCAGACTTTGTGACCAAAGTCATCACCCAATACAAGTGGCAGGAGTTCTGTGTTCACCCTCAGGAGGTCGTGGTGCCTTTAGTTCGAG
AATTCTATCCTCGCTTGAGGGAAGAGAGCATGAGCATGACGGTGGTGAGAGGTAAGATGATGAAAGAAGCTTTAAAAATGGTGGCCAACAAGGGAGTTCAATGGAAGGAG
TCTCAAACAAAGGTGAAGACATTAGTGCCCAGTGATCTCAAGCCAGAATCAGCAGTATGGCTTCACTTTATCAAGAACAGACGGATACCCAAAACCCACGACAGTACCAT
TTCAGTAGAGAGGGTTATGCTTCTCTACAGCATCATGAAGGGAAAGGACAAGGCTTCCACTTCCCAAGCTACTCCACCACCGGGGCTGACACCTACTTCACCTCCTGATC
ATACTCCTATTTTAGGGCCTACACTATCATTAGAGGCCCTTGCATTCGTCTTCCGACAGCTAGACCAGATTAAAGAAAAGCTGAAGGCTTACTGGGTCTATGCTAAGGAG
AGAGATGAAGCTATTAAAGAGTTCTACATCTCTATCGCCCCCGTGTTCCCTGACTTCCCTCAATCGTTGCTGCCTCAAGAAGAGAAAGAATTTGAAGATGAAGATGAGGA
TGAAGAAGATGAAAGAGAGAGTTCCTCGGACGAGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGCAAGAAGATGAGTTTGCAAGAAAAAGGAACTTGGAAGAGGAAAAAGAAGTTGAGAAAAAGAAGGAAGAAGAAAAACAAGAGGCCGAGAGGGCCATTCAAGCTGA
AAAAGAGAGAAAAGAAGAAAAAGAACTCAGGAGAGTGGCTGCTGACCTCCACCTCCTCAAGCAAGAAAAAGAAAGAAGAGAAAATTTGAAAGAAGAAGAACCAAGAAGAA
AAGAGGCTGAAGTGAGGTTGAACAGTTGCAAGAAGTTGAAGAAGAGGCCCTTGAAGGACCAAGAAGGCCAAGAGAAGGCCAATGAAGAAGGCCAAGTTAATGAGGCCCTT
GACCCGCTGTTTGACTATGACATTAGGGGACCTCCACTAGCTGCTGATAGTACCTCTTTGGAAGAGAAGAAGAATGAAGAGAAAATTGAAAAAGAGGAGGTCGGGACCTC
CAATGAATCAGAAATTGAGTCAAATTCTAAGATAAAGGAATTGGATGATGACCAAATTCCTATCTCTGCAGCTTTGAGGAAGAAAAGAAGAAGAGAACTGAGAGCCGAGA
GGAGGACCAATAACAAAAATGACCCTATTTTTGCCAAGAGGCCGAGGACAAGTTCCATGGACGCCTCTTCTGCAGCTCCTCCTACCTCCACACCTGTCAAACCGAAATTC
AAATCACCTAAAGCTCCAAAGAATCTGTTTCCTGAAGTCTTCAAGGATGTCAATTTCCAAGAGAAGATGGAAATTATGAGAAAAAGAGACTTTCTGAACGAGAAGGGATT
CTCCAACAGAGCAGGGACCTTGCCAGACTTTGTGACCAAAGTCATCACCCAATACAAGTGGCAGGAGTTCTGTGTTCACCCTCAGGAGGTCGTGGTGCCTTTAGTTCGAG
AATTCTATCCTCGCTTGAGGGAAGAGAGCATGAGCATGACGGTGGTGAGAGGTAAGATGATGAAAGAAGCTTTAAAAATGGTGGCCAACAAGGGAGTTCAATGGAAGGAG
TCTCAAACAAAGGTGAAGACATTAGTGCCCAGTGATCTCAAGCCAGAATCAGCAGTATGGCTTCACTTTATCAAGAACAGACGGATACCCAAAACCCACGACAGTACCAT
TTCAGTAGAGAGGGTTATGCTTCTCTACAGCATCATGAAGGGAAAGGACAAGGCTTCCACTTCCCAAGCTACTCCACCACCGGGGCTGACACCTACTTCACCTCCTGATC
ATACTCCTATTTTAGGGCCTACACTATCATTAGAGGCCCTTGCATTCGTCTTCCGACAGCTAGACCAGATTAAAGAAAAGCTGAAGGCTTACTGGGTCTATGCTAAGGAG
AGAGATGAAGCTATTAAAGAGTTCTACATCTCTATCGCCCCCGTGTTCCCTGACTTCCCTCAATCGTTGCTGCCTCAAGAAGAGAAAGAATTTGAAGATGAAGATGAGGA
TGAAGAAGATGAAAGAGAGAGTTCCTCGGACGAGGAATAA
Protein sequenceShow/hide protein sequence
MRQEDEFARKRNLEEEKEVEKKKEEEKQEAERAIQAEKERKEEKELRRVAADLHLLKQEKERRENLKEEEPRRKEAEVRLNSCKKLKKRPLKDQEGQEKANEEGQVNEAL
DPLFDYDIRGPPLAADSTSLEEKKNEEKIEKEEVGTSNESEIESNSKIKELDDDQIPISAALRKKRRRELRAERRTNNKNDPIFAKRPRTSSMDASSAAPPTSTPVKPKF
KSPKAPKNLFPEVFKDVNFQEKMEIMRKRDFLNEKGFSNRAGTLPDFVTKVITQYKWQEFCVHPQEVVVPLVREFYPRLREESMSMTVVRGKMMKEALKMVANKGVQWKE
SQTKVKTLVPSDLKPESAVWLHFIKNRRIPKTHDSTISVERVMLLYSIMKGKDKASTSQATPPPGLTPTSPPDHTPILGPTLSLEALAFVFRQLDQIKEKLKAYWVYAKE
RDEAIKEFYISIAPVFPDFPQSLLPQEEKEFEDEDEDEEDERESSSDEE