| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6603961.1 putative pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia] | 1.7e-43 | 51.2 | Show/hide |
Query: GKCPQFSWPFSNIMILLRWQHVQRNFTVLVVAGTKTKDL-HCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNII
GKCPQ SW FS+IMIL R H+ RNFTVL +AGT+TKD H LNTKL PS NTHFANQVD+ E N ELK+LVR LKDA DMFD+MPQRD VSWTNII
Subjt: GKCPQFSWPFSNIMILLRWQHVQRNFTVLVVAGTKTKDL-HCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNII
Query: ----------------------------------------------YGT--------------------LLDMYMKIGEIERSCKVFDEMPRRNAVTWTT
YGT LLDMYMKIGE+ RSC+VFDEMP RN V WT
Subjt: ----------------------------------------------YGT--------------------LLDMYMKIGEIERSCKVFDEMPRRNAVTWTT
Query: IITGLVRAG
+ITGLVRAG
Subjt: IITGLVRAG
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| KAG7034130.1 putative pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyrosperma] | 1.7e-43 | 51.2 | Show/hide |
Query: GKCPQFSWPFSNIMILLRWQHVQRNFTVLVVAGTKTKDL-HCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNII
GKCPQ SW FS+IMIL R H+ RNFTVL +AGT+TKD H LNTKL PS NTHFANQVD+ E N ELK+LVR LKDA DMFD+MPQRD VSWTNII
Subjt: GKCPQFSWPFSNIMILLRWQHVQRNFTVLVVAGTKTKDL-HCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNII
Query: ----------------------------------------------YGT--------------------LLDMYMKIGEIERSCKVFDEMPRRNAVTWTT
YGT LLDMYMKIGE+ RSC+VFDEMP RN V WT
Subjt: ----------------------------------------------YGT--------------------LLDMYMKIGEIERSCKVFDEMPRRNAVTWTT
Query: IITGLVRAG
+ITGLVRAG
Subjt: IITGLVRAG
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| XP_022949984.1 putative pentatricopeptide repeat-containing protein At3g47840 isoform X1 [Cucurbita moschata] | 5.2e-45 | 52.15 | Show/hide |
Query: GKCPQFSWPFSNIMILLRWQHVQRNFTVLVVAGTKTKDL-HCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNII
GKCPQ SWPFS+IMIL R H+ RNFTVL +AGT+TKD H LNTKL PS NTHFANQVD+ E N ELK+LVR LKDA DMFD+MPQRD VSWTNII
Subjt: GKCPQFSWPFSNIMILLRWQHVQRNFTVLVVAGTKTKDL-HCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNII
Query: ----------------------------------------------YGT--------------------LLDMYMKIGEIERSCKVFDEMPRRNAVTWTT
YGT LLDMYMKIGE+ RSC+VFDEMP RN VTWT
Subjt: ----------------------------------------------YGT--------------------LLDMYMKIGEIERSCKVFDEMPRRNAVTWTT
Query: IITGLVRAG
+ITGLVRAG
Subjt: IITGLVRAG
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| XP_022978429.1 putative pentatricopeptide repeat-containing protein At3g47840 isoform X1 [Cucurbita maxima] | 7.5e-44 | 51.67 | Show/hide |
Query: GKCPQFSWPFSNIMILLRWQHVQRNFTVLVVAGTKTKDL-HCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNII
GKCPQ SWPFS+IMIL R H+ RNFTVL +AGT+TKD H LNTKL NTHFANQVD+AE N ELK+LVR LKDA DMFD+MPQRD VSWTNII
Subjt: GKCPQFSWPFSNIMILLRWQHVQRNFTVLVVAGTKTKDL-HCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNII
Query: ----------------------------------------------YGT--------------------LLDMYMKIGEIERSCKVFDEMPRRNAVTWTT
YGT LLDMYMKIGE+ RSC+VFDEMP RN VTWT
Subjt: ----------------------------------------------YGT--------------------LLDMYMKIGEIERSCKVFDEMPRRNAVTWTT
Query: IITGLVRAG
+ITGLVRAG
Subjt: IITGLVRAG
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| XP_023544313.1 putative pentatricopeptide repeat-containing protein At3g47840 isoform X1 [Cucurbita pepo subsp. pepo] | 5.2e-45 | 52.15 | Show/hide |
Query: GKCPQFSWPFSNIMILLRWQHVQRNFTVLVVAGTKTKDL-HCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNII
GKCPQ SWPFS+IMIL R H+ RNFTVL +AGT+TKD H LNTKL PS NTHFANQVD+ E N ELK+LVR LKDA DMFD+MPQRD VSWTNII
Subjt: GKCPQFSWPFSNIMILLRWQHVQRNFTVLVVAGTKTKDL-HCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNII
Query: ----------------------------------------------YGT--------------------LLDMYMKIGEIERSCKVFDEMPRRNAVTWTT
YGT LLDMYMKIGE+ RSC+VFDEMP RN VTWT
Subjt: ----------------------------------------------YGT--------------------LLDMYMKIGEIERSCKVFDEMPRRNAVTWTT
Query: IITGLVRAG
+ITGLVRAG
Subjt: IITGLVRAG
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A6J1DSK9 putative pentatricopeptide repeat-containing protein At3g47840 | 3.3e-37 | 48.21 | Show/hide |
Query: MILLRWQHVQRNFTVLVVAGTKTKDLHCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNII--------------
MIL R QH++RNFTV VVAGT+TKDLH LN+K N++ N ++VAEANI+LK+LVR HLKDA ++FDQMP++DEVSWTN+I
Subjt: MILLRWQHVQRNFTVLVVAGTKTKDLHCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNII--------------
Query: --------------------------------YGT--------------------LLDMYMKIGEIERSCKVFDEMPRRNAVTWTTIITGLVRAG
YGT LLDMYMKIGEI RSCKVFDEMP RNAVTWT +ITGLVRAG
Subjt: --------------------------------YGT--------------------LLDMYMKIGEIERSCKVFDEMPRRNAVTWTTIITGLVRAG
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| A0A6J1GEB4 putative pentatricopeptide repeat-containing protein At3g47840 isoform X2 | 2.5e-37 | 50 | Show/hide |
Query: MILLRWQHVQRNFTVLVVAGTKTKDL-HCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNII-------------
MIL R H+ RNFTVL +AGT+TKD H LNTKL PS NTHFANQVD+ E N ELK+LVR LKDA DMFD+MPQRD VSWTNII
Subjt: MILLRWQHVQRNFTVLVVAGTKTKDL-HCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNII-------------
Query: ---------------------------------YGT--------------------LLDMYMKIGEIERSCKVFDEMPRRNAVTWTTIITGLVRAG
YGT LLDMYMKIGE+ RSC+VFDEMP RN VTWT +ITGLVRAG
Subjt: ---------------------------------YGT--------------------LLDMYMKIGEIERSCKVFDEMPRRNAVTWTTIITGLVRAG
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| A0A6J1GEH8 putative pentatricopeptide repeat-containing protein At3g47840 isoform X1 | 2.5e-45 | 52.15 | Show/hide |
Query: GKCPQFSWPFSNIMILLRWQHVQRNFTVLVVAGTKTKDL-HCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNII
GKCPQ SWPFS+IMIL R H+ RNFTVL +AGT+TKD H LNTKL PS NTHFANQVD+ E N ELK+LVR LKDA DMFD+MPQRD VSWTNII
Subjt: GKCPQFSWPFSNIMILLRWQHVQRNFTVLVVAGTKTKDL-HCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNII
Query: ----------------------------------------------YGT--------------------LLDMYMKIGEIERSCKVFDEMPRRNAVTWTT
YGT LLDMYMKIGE+ RSC+VFDEMP RN VTWT
Subjt: ----------------------------------------------YGT--------------------LLDMYMKIGEIERSCKVFDEMPRRNAVTWTT
Query: IITGLVRAG
+ITGLVRAG
Subjt: IITGLVRAG
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| A0A6J1IMM7 putative pentatricopeptide repeat-containing protein At3g47840 isoform X2 | 3.7e-36 | 49.49 | Show/hide |
Query: MILLRWQHVQRNFTVLVVAGTKTKDL-HCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNII-------------
MIL R H+ RNFTVL +AGT+TKD H LNTKL NTHFANQVD+AE N ELK+LVR LKDA DMFD+MPQRD VSWTNII
Subjt: MILLRWQHVQRNFTVLVVAGTKTKDL-HCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNII-------------
Query: ---------------------------------YGT--------------------LLDMYMKIGEIERSCKVFDEMPRRNAVTWTTIITGLVRAG
YGT LLDMYMKIGE+ RSC+VFDEMP RN VTWT +ITGLVRAG
Subjt: ---------------------------------YGT--------------------LLDMYMKIGEIERSCKVFDEMPRRNAVTWTTIITGLVRAG
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| A0A6J1IU19 putative pentatricopeptide repeat-containing protein At3g47840 isoform X1 | 3.6e-44 | 51.67 | Show/hide |
Query: GKCPQFSWPFSNIMILLRWQHVQRNFTVLVVAGTKTKDL-HCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNII
GKCPQ SWPFS+IMIL R H+ RNFTVL +AGT+TKD H LNTKL NTHFANQVD+AE N ELK+LVR LKDA DMFD+MPQRD VSWTNII
Subjt: GKCPQFSWPFSNIMILLRWQHVQRNFTVLVVAGTKTKDL-HCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNII
Query: ----------------------------------------------YGT--------------------LLDMYMKIGEIERSCKVFDEMPRRNAVTWTT
YGT LLDMYMKIGE+ RSC+VFDEMP RN VTWT
Subjt: ----------------------------------------------YGT--------------------LLDMYMKIGEIERSCKVFDEMPRRNAVTWTT
Query: IITGLVRAG
+ITGLVRAG
Subjt: IITGLVRAG
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O04590 Pentatricopeptide repeat-containing protein At1g62260, mitochondrial | 8.4e-14 | 31.97 | Show/hide |
Query: RNFTVLVVAGTKTKDLHCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNIIYGTLLDMYMKIGEIERSCKVFDEM
R+ +VL++ CL L ++F+T ++ + N EL +++R ++ +A D+F+++ R+ V+W +I G Y+K E+ ++ K+FD M
Subjt: RNFTVLVVAGTKTKDLHCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNIIYGTLLDMYMKIGEIERSCKVFDEM
Query: PRRNAVTWTTIITGLVRAGSIR
P+R+ VTW T+I+G V G IR
Subjt: PRRNAVTWTTIITGLVRAGSIR
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| Q56XI1 Pentatricopeptide repeat-containing protein At1g09410, mitochondrial | 5.1e-11 | 44.78 | Show/hide |
Query: KDAHDMFDQMPQRDEVSWTNIIYGTLLDMYMKIGEIERSCKVFDEMPRRNAVTWTTIITGLVRAGSI
+DA +FD+MP R+ +SW ++ G YMK GEI+ + KVFD MP RN V+WT ++ G V G +
Subjt: KDAHDMFDQMPQRDEVSWTNIIYGTLLDMYMKIGEIERSCKVFDEMPRRNAVTWTTIITGLVRAGSI
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| Q9FHF9 Pentatricopeptide repeat-containing protein At5g46460, mitochondrial | 3.3e-10 | 36.26 | Show/hide |
Query: NQVDVAEANIELKEL---VRIDHLKDAHDMFDQMPQRDEVSWTNIIYGTLLDMYMKIGEIERSCKVFDEMPRRNAVTWTTIITGLVRAGSI
NQV ++ K + R + L DA ++FD+MP RD VSW ++I G ++ G++ + K+FDEMP R+ V+WT ++ G R+G +
Subjt: NQVDVAEANIELKEL---VRIDHLKDAHDMFDQMPQRDEVSWTNIIYGTLLDMYMKIGEIERSCKVFDEMPRRNAVTWTTIITGLVRAGSI
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| Q9LS72 Pentatricopeptide repeat-containing protein At3g29230 | 2.1e-12 | 36.36 | Show/hide |
Query: DVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNIIYGTLLDMYMKIGEIERSCKVFDEMPRRNAVTWTTIITGLVRAGSIRSHWLPLDSHQSPA
D N L LV+ L+DA +FD+MPQRD +SW T+LD Y + E+ ++ ++F++MP RN V+W+T++ G +AG + + D PA
Subjt: DVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNIIYGTLLDMYMKIGEIERSCKVFDEMPRRNAVTWTTIITGLVRAGSIRSHWLPLDSHQSPA
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| Q9STS9 Putative pentatricopeptide repeat-containing protein At3g47840 | 1.5e-10 | 70.73 | Show/hide |
Query: TLLDMYMKIGEIERSCKVFDEMPRRNAVTWTTIITGLVRAG
+LLDMY ++G+I++SC+VF EMP RNAVTWT IITGLV AG
Subjt: TLLDMYMKIGEIERSCKVFDEMPRRNAVTWTTIITGLVRAG
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G09410.1 pentatricopeptide (PPR) repeat-containing protein | 3.6e-12 | 44.78 | Show/hide |
Query: KDAHDMFDQMPQRDEVSWTNIIYGTLLDMYMKIGEIERSCKVFDEMPRRNAVTWTTIITGLVRAGSI
+DA +FD+MP R+ +SW ++ G YMK GEI+ + KVFD MP RN V+WT ++ G V G +
Subjt: KDAHDMFDQMPQRDEVSWTNIIYGTLLDMYMKIGEIERSCKVFDEMPRRNAVTWTTIITGLVRAGSI
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| AT1G13410.1 Tetratricopeptide repeat (TPR)-like superfamily protein | 2.4e-11 | 31.3 | Show/hide |
Query: VVAGTKTKDLHCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNIIYGTLLDMYMKIGEIERSCKVFDEMPRRNAV
VV T + + LN LV + + + D+ N + + + ++ +A +FDQMP RD +SW T+L+ Y IG++E +VFD+MP RN
Subjt: VVAGTKTKDLHCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNIIYGTLLDMYMKIGEIERSCKVFDEMPRRNAV
Query: TWTTIITGLVRAGSI
+W +I G + G +
Subjt: TWTTIITGLVRAGSI
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| AT1G62260.1 mitochondrial editing factor 9 | 6.0e-15 | 31.97 | Show/hide |
Query: RNFTVLVVAGTKTKDLHCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNIIYGTLLDMYMKIGEIERSCKVFDEM
R+ +VL++ CL L ++F+T ++ + N EL +++R ++ +A D+F+++ R+ V+W +I G Y+K E+ ++ K+FD M
Subjt: RNFTVLVVAGTKTKDLHCLNTKLVPSTFNTHFANQVDVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNIIYGTLLDMYMKIGEIERSCKVFDEM
Query: PRRNAVTWTTIITGLVRAGSIR
P+R+ VTW T+I+G V G IR
Subjt: PRRNAVTWTTIITGLVRAGSIR
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| AT3G29230.1 Tetratricopeptide repeat (TPR)-like superfamily protein | 1.5e-13 | 36.36 | Show/hide |
Query: DVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNIIYGTLLDMYMKIGEIERSCKVFDEMPRRNAVTWTTIITGLVRAGSIRSHWLPLDSHQSPA
D N L LV+ L+DA +FD+MPQRD +SW T+LD Y + E+ ++ ++F++MP RN V+W+T++ G +AG + + D PA
Subjt: DVAEANIELKELVRIDHLKDAHDMFDQMPQRDEVSWTNIIYGTLLDMYMKIGEIERSCKVFDEMPRRNAVTWTTIITGLVRAGSIRSHWLPLDSHQSPA
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| AT3G47840.1 Tetratricopeptide repeat (TPR)-like superfamily protein | 1.1e-11 | 70.73 | Show/hide |
Query: TLLDMYMKIGEIERSCKVFDEMPRRNAVTWTTIITGLVRAG
+LLDMY ++G+I++SC+VF EMP RNAVTWT IITGLV AG
Subjt: TLLDMYMKIGEIERSCKVFDEMPRRNAVTWTTIITGLVRAG
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