; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006796 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006796
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionBiotin carboxylase
Genome locationscaffold1:55834015..55834752
RNA-Seq ExpressionSpg006796
SyntenySpg006796
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:2001295 - malonyl-CoA biosynthetic process (biological process)
GO:0003989 - acetyl-CoA carboxylase activity (molecular function)
GO:0004075 - biotin carboxylase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR005481 - Biotin carboxylase-like, N-terminal domain
IPR011764 - Biotin carboxylation domain
IPR016185 - Pre-ATP-grasp domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027676.1 Biotin carboxylase 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-5691.27Show/hide
Query:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
        MDAAMPLCKSARAP LTG FAGTTNGLRSS C+FMG+ KVSFPRQ ANG+QYSRKSWKNK  LQV CRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
Subjt:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS

Query:  TIDKDALHVKLADESVCIGEAPSSQS
        TIDKDALHVKLADESVCIGEAPSSQS
Subjt:  TIDKDALHVKLADESVCIGEAPSSQS

XP_008449521.1 PREDICTED: biotin carboxylase 1, chloroplastic [Cucumis melo]9.0e-5792.06Show/hide
Query:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
        MDAAMPLCKSARAPSLTGL+AGTTNG RSSQCTF+GANK+SFPRQRANG+ Y+RKS KN RGLQV CRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
Subjt:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS

Query:  TIDKDALHVKLADESVCIGEAPSSQS
        TIDKDALHVKLADESVCIGEAPSSQS
Subjt:  TIDKDALHVKLADESVCIGEAPSSQS

XP_022925189.1 biotin carboxylase 2, chloroplastic [Cucurbita moschata]3.4e-5692.06Show/hide
Query:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
        MDAAMPLCKSARAP LTG FAGTTNGLRSS C+FMGA KVSFPRQ ANG+QYSRKSWKNK  LQV CRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
Subjt:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS

Query:  TIDKDALHVKLADESVCIGEAPSSQS
        TIDKDALHVKLADESVCIGEAPSSQS
Subjt:  TIDKDALHVKLADESVCIGEAPSSQS

XP_022966273.1 biotin carboxylase 2, chloroplastic [Cucurbita maxima]3.4e-5692.06Show/hide
Query:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
        MDAAMPLCKSARAP LTG FAGTTNGLRSS C+FMGA KVSFPRQ ANG+QYSRKSWKNK  LQV CRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
Subjt:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS

Query:  TIDKDALHVKLADESVCIGEAPSSQS
        TIDKDALHVKLADESVCIGEAPSSQS
Subjt:  TIDKDALHVKLADESVCIGEAPSSQS

XP_038882709.1 biotin carboxylase 1, chloroplastic [Benincasa hispida]2.8e-5895.24Show/hide
Query:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
        MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGA KVSFPRQRANG+QY+RKS KN RGLQV CRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
Subjt:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS

Query:  TIDKDALHVKLADESVCIGEAPSSQS
        TIDKDALHVKLADESVCIGEAPSSQS
Subjt:  TIDKDALHVKLADESVCIGEAPSSQS

TrEMBL top hitse value%identityAlignment
A0A0A0KYI1 Biotin carboxylase5.9e-5487.3Show/hide
Query:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
        MDAAMPLCKSARAPSLTGLFAGTTN  RSSQCTFMGANK+SFP QRA+G++Y+RKS KN +GLQV CRA+KILV+NRGEIAVRIIRTAHELGIPCVAVYS
Subjt:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS

Query:  TIDKDALHVKLADESVCIGEAPSSQS
        T+DKDALHVKLADESVCIGEAPSS S
Subjt:  TIDKDALHVKLADESVCIGEAPSSQS

A0A1S3BM82 Biotin carboxylase4.4e-5792.06Show/hide
Query:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
        MDAAMPLCKSARAPSLTGL+AGTTNG RSSQCTF+GANK+SFPRQRANG+ Y+RKS KN RGLQV CRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
Subjt:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS

Query:  TIDKDALHVKLADESVCIGEAPSSQS
        TIDKDALHVKLADESVCIGEAPSSQS
Subjt:  TIDKDALHVKLADESVCIGEAPSSQS

A0A5A7V5F1 Biotin carboxylase4.4e-5792.06Show/hide
Query:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
        MDAAMPLCKSARAPSLTGL+AGTTNG RSSQCTF+GANK+SFPRQRANG+ Y+RKS KN RGLQV CRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
Subjt:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS

Query:  TIDKDALHVKLADESVCIGEAPSSQS
        TIDKDALHVKLADESVCIGEAPSSQS
Subjt:  TIDKDALHVKLADESVCIGEAPSSQS

A0A6J1EBF3 Biotin carboxylase1.7e-5692.06Show/hide
Query:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
        MDAAMPLCKSARAP LTG FAGTTNGLRSS C+FMGA KVSFPRQ ANG+QYSRKSWKNK  LQV CRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
Subjt:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS

Query:  TIDKDALHVKLADESVCIGEAPSSQS
        TIDKDALHVKLADESVCIGEAPSSQS
Subjt:  TIDKDALHVKLADESVCIGEAPSSQS

A0A6J1HRJ7 Biotin carboxylase1.7e-5692.06Show/hide
Query:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
        MDAAMPLCKSARAP LTG FAGTTNGLRSS C+FMGA KVSFPRQ ANG+QYSRKSWKNK  LQV CRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
Subjt:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS

Query:  TIDKDALHVKLADESVCIGEAPSSQS
        TIDKDALHVKLADESVCIGEAPSSQS
Subjt:  TIDKDALHVKLADESVCIGEAPSSQS

SwissProt top hitse value%identityAlignment
B9HBA8 Biotin carboxylase 1, chloroplastic2.5e-4172.22Show/hide
Query:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
        M+A +P+CKS    S  GLF G T+G+RSSQC+FM  NKV+FPRQRA          KN   L VTCRA+KILVANRGEIAVR+IRTAHE+GIPCVAVYS
Subjt:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS

Query:  TIDKDALHVKLADESVCIGEAPSSQS
        TIDKDALHVKLADESVCIGEAPSSQS
Subjt:  TIDKDALHVKLADESVCIGEAPSSQS

B9N843 Biotin carboxylase 2, chloroplastic1.6e-4069.05Show/hide
Query:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS
        M+A +P+CKS    S  GLF    +G+R+SQC+FM   KV+FPRQR    Q +  + KN   L VTCRA+KILVANRGEIAVR+IRTAHELGIPCVAVYS
Subjt:  MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYS

Query:  TIDKDALHVKLADESVCIGEAPSSQS
        TIDKDALHVKLADESVCIGEAPS+QS
Subjt:  TIDKDALHVKLADESVCIGEAPSSQS

O04983 Biotin carboxylase, chloroplastic2.7e-3262.88Show/hide
Query:  MDAAMPLCKSARAPSLTGLFAGTTNG---LRSSQCTFMGANKVSFPRQRANGLQYSRKSWK--NKRGLQVTCR-ADKILVANRGEIAVRIIRTAHELGIP
        MDA+M +  S    S   L  G + G   +RSS C  M  +KV+FPRQR   L+ S+K  K     GL VTC   DKILVANRGEIAVR+IRTAHE+GIP
Subjt:  MDAAMPLCKSARAPSLTGLFAGTTNG---LRSSQCTFMGANKVSFPRQRANGLQYSRKSWK--NKRGLQVTCR-ADKILVANRGEIAVRIIRTAHELGIP

Query:  CVAVYSTIDKDALHVKLADESVCIGEAPSSQS
        CVAVYSTIDKDALHVKLADE+VCIGEAPS+QS
Subjt:  CVAVYSTIDKDALHVKLADESVCIGEAPSSQS

Q06862 Biotin carboxylase1.2e-1464.91Show/hide
Query:  DKILVANRGEIAVRIIRTAHELGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQS
        DKIL+ANRGEIA+RI+R   E+GI  +AV+ST+D++ALHV+LADE+VCIGE  S++S
Subjt:  DKILVANRGEIAVRIIRTAHELGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQS

Q19842 Propionyl-CoA carboxylase alpha chain, mitochondrial1.2e-1463.16Show/hide
Query:  DKILVANRGEIAVRIIRTAHELGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQS
        DKIL+ANRGEIA R+I+TA  +GI  VAV+S +D ++LHVK+ADE+VC+GEAP+++S
Subjt:  DKILVANRGEIAVRIIRTAHELGIPCVAVYSTIDKDALHVKLADESVCIGEAPSSQS

Arabidopsis top hitse value%identityAlignment
AT1G03090.1 methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA)1.9e-1272Show/hide
Query:  DKILVANRGEIAVRIIRTAHELGIPCVAVYSTIDKDALHVKLADESVCIG
        +KILVANRGEIA RI+RTA  LGI  VAVYS  D+D+LHVK ADE+V IG
Subjt:  DKILVANRGEIAVRIIRTAHELGIPCVAVYSTIDKDALHVKLADESVCIG

AT1G03090.2 methylcrotonyl-CoA carboxylase alpha chain, mitochondrial / 3-methylcrotonyl-CoA carboxylase 1 (MCCA)1.9e-1272Show/hide
Query:  DKILVANRGEIAVRIIRTAHELGIPCVAVYSTIDKDALHVKLADESVCIG
        +KILVANRGEIA RI+RTA  LGI  VAVYS  D+D+LHVK ADE+V IG
Subjt:  DKILVANRGEIAVRIIRTAHELGIPCVAVYSTIDKDALHVKLADESVCIG

AT5G35360.1 acetyl Co-enzyme a carboxylase biotin carboxylase subunit1.9e-3362.88Show/hide
Query:  MDAAMPLCKSARAPSLTGLFAGTTNG---LRSSQCTFMGANKVSFPRQRANGLQYSRKSWK--NKRGLQVTCR-ADKILVANRGEIAVRIIRTAHELGIP
        MDA+M +  S    S   L  G + G   +RSS C  M  +KV+FPRQR   L+ S+K  K     GL VTC   DKILVANRGEIAVR+IRTAHE+GIP
Subjt:  MDAAMPLCKSARAPSLTGLFAGTTNG---LRSSQCTFMGANKVSFPRQRANGLQYSRKSWK--NKRGLQVTCR-ADKILVANRGEIAVRIIRTAHELGIP

Query:  CVAVYSTIDKDALHVKLADESVCIGEAPSSQS
        CVAVYSTIDKDALHVKLADE+VCIGEAPS+QS
Subjt:  CVAVYSTIDKDALHVKLADESVCIGEAPSSQS

AT5G35360.2 acetyl Co-enzyme a carboxylase biotin carboxylase subunit1.9e-3362.88Show/hide
Query:  MDAAMPLCKSARAPSLTGLFAGTTNG---LRSSQCTFMGANKVSFPRQRANGLQYSRKSWK--NKRGLQVTCR-ADKILVANRGEIAVRIIRTAHELGIP
        MDA+M +  S    S   L  G + G   +RSS C  M  +KV+FPRQR   L+ S+K  K     GL VTC   DKILVANRGEIAVR+IRTAHE+GIP
Subjt:  MDAAMPLCKSARAPSLTGLFAGTTNG---LRSSQCTFMGANKVSFPRQRANGLQYSRKSWK--NKRGLQVTCR-ADKILVANRGEIAVRIIRTAHELGIP

Query:  CVAVYSTIDKDALHVKLADESVCIGEAPSSQS
        CVAVYSTIDKDALHVKLADE+VCIGEAPS+QS
Subjt:  CVAVYSTIDKDALHVKLADESVCIGEAPSSQS

AT5G35360.3 acetyl Co-enzyme a carboxylase biotin carboxylase subunit1.9e-3362.88Show/hide
Query:  MDAAMPLCKSARAPSLTGLFAGTTNG---LRSSQCTFMGANKVSFPRQRANGLQYSRKSWK--NKRGLQVTCR-ADKILVANRGEIAVRIIRTAHELGIP
        MDA+M +  S    S   L  G + G   +RSS C  M  +KV+FPRQR   L+ S+K  K     GL VTC   DKILVANRGEIAVR+IRTAHE+GIP
Subjt:  MDAAMPLCKSARAPSLTGLFAGTTNG---LRSSQCTFMGANKVSFPRQRANGLQYSRKSWK--NKRGLQVTCR-ADKILVANRGEIAVRIIRTAHELGIP

Query:  CVAVYSTIDKDALHVKLADESVCIGEAPSSQS
        CVAVYSTIDKDALHVKLADE+VCIGEAPS+QS
Subjt:  CVAVYSTIDKDALHVKLADESVCIGEAPSSQS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGCCGCAATGCCTCTCTGCAAATCTGCTCGCGCTCCCTCTCTCACGGGTTTATTTGCTGGGACTACCAATGGATTGAGGAGTTCCCAATGTACCTTCATGGGTGC
AAACAAAGTCAGCTTTCCTCGACAGAGAGCTAATGGACTGCAATATAGTCGTAAATCGTGGAAGAATAAGAGAGGCCTTCAAGTTACGTGCCGCGCTGATAAAATTCTGG
TGGCTAATAGAGGAGAAATTGCTGTTCGTATTATTAGAACTGCTCATGAATTGGGAATACCTTGTGTGGCTGTGTACTCAACCATTGACAAGGACGCACTCCATGTAAAA
TTAGCTGATGAATCCGTGTGCATCGGTGAAGCTCCTAGCAGCCAATCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGCCGCAATGCCTCTCTGCAAATCTGCTCGCGCTCCCTCTCTCACGGGTTTATTTGCTGGGACTACCAATGGATTGAGGAGTTCCCAATGTACCTTCATGGGTGC
AAACAAAGTCAGCTTTCCTCGACAGAGAGCTAATGGACTGCAATATAGTCGTAAATCGTGGAAGAATAAGAGAGGCCTTCAAGTTACGTGCCGCGCTGATAAAATTCTGG
TGGCTAATAGAGGAGAAATTGCTGTTCGTATTATTAGAACTGCTCATGAATTGGGAATACCTTGTGTGGCTGTGTACTCAACCATTGACAAGGACGCACTCCATGTAAAA
TTAGCTGATGAATCCGTGTGCATCGGTGAAGCTCCTAGCAGCCAATCGTAA
Protein sequenceShow/hide protein sequence
MDAAMPLCKSARAPSLTGLFAGTTNGLRSSQCTFMGANKVSFPRQRANGLQYSRKSWKNKRGLQVTCRADKILVANRGEIAVRIIRTAHELGIPCVAVYSTIDKDALHVK
LADESVCIGEAPSSQS