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Spg006860 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006860
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionIleal sodium/bile acid cotransporter, putative
Genome locationscaffold10:39760085..39760579
RNA-Seq ExpressionSpg006860
SyntenySpg006860
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]2.4e-4669.28Show/hide
Query:  MNALASFINTMNQRNNGISIFATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFISSPNSSPPLLTHLFGAAVLISFAVSFAGLFLQNS
        MN L SFI  +N+RN  I       + LPICI MQ+  P  ++ +  N+GKTILGLTFQAVLALFI+SPNSSPPLLTHLF AAVLISFAVSFAG+FLQN 
Subjt:  MNALASFINTMNQRNNGISIFATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFISSPNSSPPLLTHLFGAAVLISFAVSFAGLFLQNS

Query:  FPRIARFFEKVGALFAAIGVCIISSLLLVHQNFAWICWLASAFSLVVFVLSFK
        FPRIA  FEK+GAL AAIGVCI++S LL+HQNFAWI WLAS FSL+ FVLSF+
Subjt:  FPRIARFFEKVGALFAAIGVCIISSLLLVHQNFAWICWLASAFSLVVFVLSFK

KAG6579132.1 hypothetical protein SDJN03_23580, partial [Cucurbita argyrosperma subsp. sororia]1.4e-3362.88Show/hide
Query:  FATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFISSPNSSPPLLTHLFGAAVLISFAVSFAGLFLQNSFPRIARFFEKVGALFAAIGV
        F+TP DCLPI  R ++QR +P      N+GK I+GLT QA+LA+FISSP+SSPPLL  LFGA + ISF +SFAG+FL+N+FP+ AR FEK+GALFAAIGV
Subjt:  FATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFISSPNSSPPLLTHLFGAAVLISFAVSFAGLFLQNSFPRIARFFEKVGALFAAIGV

Query:  CIISSLLLVHQNFAWICWLASAFSLVVFVLSF
         II+S LL+H+N+AWI  LA  FSL+VF LS+
Subjt:  CIISSLLLVHQNFAWICWLASAFSLVVFVLSF

KGN49803.1 hypothetical protein Csa_004681 [Cucumis sativus]3.9e-4464.02Show/hide
Query:  MASTSHQTSVDMNALASFINTMNQRNNGISIFATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFISSPNSSPPLLTHLFGAAVLISFA
        M S+S Q S+DMN L S I ++N+RN  I       + LPICI MQ   P  ++ +  N+G TILGLTFQAVLALFI+S  SSPPLLTHLFGAAVLISFA
Subjt:  MASTSHQTSVDMNALASFINTMNQRNNGISIFATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFISSPNSSPPLLTHLFGAAVLISFA

Query:  VSFAGLFLQNSFPRIARFFEKVGALFAAIGVCIISSLLLVHQNFAWICWLASAFSLVVFVLSFK
        VSF G+FLQ+ FPRIA  FEK+GAL AAIGVCI++S LL+HQNFAWI WLA  FSL+ F+LSF+
Subjt:  VSFAGLFLQNSFPRIARFFEKVGALFAAIGVCIISSLLLVHQNFAWICWLASAFSLVVFVLSFK

KGN49808.1 hypothetical protein Csa_004650 [Cucumis sativus]1.0e-5270.3Show/hide
Query:  MASTSHQTSVDMNALASFINTMNQRNNGISIFATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFISS-PNSSPPLLTHLFGAAVLISF
        MASTSHQTS+DM+A +SFI T++QRN G+    TPS+CLP+ IRMQQ  PQ  A S Q LGK IL L+FQAVLALFISS P S PPLL H F AAV ISF
Subjt:  MASTSHQTSVDMNALASFINTMNQRNNGISIFATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFISS-PNSSPPLLTHLFGAAVLISF

Query:  AVSFAGLFLQNSFPRIARFFEKVGALFAAIGVCIISSLLLVHQNFAWICWLASAFSLVVFVLSFK
        AVSFA LFL NSFPR A  FEKVGALF+A GVC I+S LLVHQNFAWICW+A  FS++VF LSFK
Subjt:  AVSFAGLFLQNSFPRIARFFEKVGALFAAIGVCIISSLLLVHQNFAWICWLASAFSLVVFVLSFK

XP_022146444.1 uncharacterized protein LOC111015658 [Momordica charantia]1.9e-3573.23Show/hide
Query:  MASTSHQTSVDMNALASFINTMNQRNNGISIF------ATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFISSPNSSPPLLTHLFGAA
        MAST  QTSVDMNAL+SFI  +N+RN GIS F      +TPSDCLPICIRM  QRP PA SS Q+LGKTILGLTFQAVLALFIS P+S P L T LFGAA
Subjt:  MASTSHQTSVDMNALASFINTMNQRNNGISIF------ATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFISSPNSSPPLLTHLFGAA

Query:  VLISFAVSFAGLFLQNSFPRIARFFEK
        VLISFAVSFAGLFLQ ++PR+A  FEK
Subjt:  VLISFAVSFAGLFLQNSFPRIARFFEK

TrEMBL top hitse value%identityAlignment
A0A0A0KJN8 Uncharacterized protein1.9e-4464.02Show/hide
Query:  MASTSHQTSVDMNALASFINTMNQRNNGISIFATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFISSPNSSPPLLTHLFGAAVLISFA
        M S+S Q S+DMN L S I ++N+RN  I       + LPICI MQ   P  ++ +  N+G TILGLTFQAVLALFI+S  SSPPLLTHLFGAAVLISFA
Subjt:  MASTSHQTSVDMNALASFINTMNQRNNGISIFATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFISSPNSSPPLLTHLFGAAVLISFA

Query:  VSFAGLFLQNSFPRIARFFEKVGALFAAIGVCIISSLLLVHQNFAWICWLASAFSLVVFVLSFK
        VSF G+FLQ+ FPRIA  FEK+GAL AAIGVCI++S LL+HQNFAWI WLA  FSL+ F+LSF+
Subjt:  VSFAGLFLQNSFPRIARFFEKVGALFAAIGVCIISSLLLVHQNFAWICWLASAFSLVVFVLSFK

A0A0A0KJP2 Uncharacterized protein5.0e-5370.3Show/hide
Query:  MASTSHQTSVDMNALASFINTMNQRNNGISIFATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFISS-PNSSPPLLTHLFGAAVLISF
        MASTSHQTS+DM+A +SFI T++QRN G+    TPS+CLP+ IRMQQ  PQ  A S Q LGK IL L+FQAVLALFISS P S PPLL H F AAV ISF
Subjt:  MASTSHQTSVDMNALASFINTMNQRNNGISIFATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFISS-PNSSPPLLTHLFGAAVLISF

Query:  AVSFAGLFLQNSFPRIARFFEKVGALFAAIGVCIISSLLLVHQNFAWICWLASAFSLVVFVLSFK
        AVSFA LFL NSFPR A  FEKVGALF+A GVC I+S LLVHQNFAWICW+A  FS++VF LSFK
Subjt:  AVSFAGLFLQNSFPRIARFFEKVGALFAAIGVCIISSLLLVHQNFAWICWLASAFSLVVFVLSFK

A0A0A0KQ03 Uncharacterized protein2.2e-2952.07Show/hide
Query:  MAST-SHQTSVDMNALASFINTMNQRNNGISIF---ATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFIS-SPNSSPPLLTHLFGAAV
        MA T  H+ S+DMN L S I  +  RN GIS        SDCLPI I+M  QRP P  +SPQ  G T L LTFQA++ LF+S +P+SS PL + LF A +
Subjt:  MAST-SHQTSVDMNALASFINTMNQRNNGISIF---ATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFIS-SPNSSPPLLTHLFGAAV

Query:  LISFAVSFAGLFLQNSFPRIARFFEKVGALFAAIGVCIISSLLLVHQNFAWICWLASAFSLVVFVLSFK
        L SF  S+ G+ LQ  FP+ A+  +  GALFAAIG CII SLLL + NF WICWLA+   L  F++SFK
Subjt:  LISFAVSFAGLFLQNSFPRIARFFEKVGALFAAIGVCIISSLLLVHQNFAWICWLASAFSLVVFVLSFK

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter1.2e-4669.28Show/hide
Query:  MNALASFINTMNQRNNGISIFATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFISSPNSSPPLLTHLFGAAVLISFAVSFAGLFLQNS
        MN L SFI  +N+RN  I       + LPICI MQ+  P  ++ +  N+GKTILGLTFQAVLALFI+SPNSSPPLLTHLF AAVLISFAVSFAG+FLQN 
Subjt:  MNALASFINTMNQRNNGISIFATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFISSPNSSPPLLTHLFGAAVLISFAVSFAGLFLQNS

Query:  FPRIARFFEKVGALFAAIGVCIISSLLLVHQNFAWICWLASAFSLVVFVLSFK
        FPRIA  FEK+GAL AAIGVCI++S LL+HQNFAWI WLAS FSL+ FVLSF+
Subjt:  FPRIARFFEKVGALFAAIGVCIISSLLLVHQNFAWICWLASAFSLVVFVLSFK

A0A6J1CY58 uncharacterized protein LOC1110156589.4e-3673.23Show/hide
Query:  MASTSHQTSVDMNALASFINTMNQRNNGISIF------ATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFISSPNSSPPLLTHLFGAA
        MAST  QTSVDMNAL+SFI  +N+RN GIS F      +TPSDCLPICIRM  QRP PA SS Q+LGKTILGLTFQAVLALFIS P+S P L T LFGAA
Subjt:  MASTSHQTSVDMNALASFINTMNQRNNGISIF------ATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFISSPNSSPPLLTHLFGAA

Query:  VLISFAVSFAGLFLQNSFPRIARFFEK
        VLISFAVSFAGLFLQ ++PR+A  FEK
Subjt:  VLISFAVSFAGLFLQNSFPRIARFFEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAACTTCACACCAAACCTCTGTGGATATGAATGCACTTGCTTCCTTTATCAATACAATGAATCAAAGAAACAATGGAATCAGCATTTTTGCCACACCATCAGA
TTGCCTCCCAATCTGCATCAGAATGCAGCAGCAGAGGCCTCAACCAGCAGCCAGCAGCCCTCAGAATCTTGGCAAGACAATTCTTGGCCTTACTTTTCAGGCAGTTTTGG
CCTTGTTCATCAGCTCACCAAATTCATCTCCTCCACTTTTGACACATCTTTTTGGTGCTGCTGTGTTGATTAGCTTTGCCGTTTCATTTGCTGGTCTTTTCCTTCAAAAT
TCGTTCCCGAGAATCGCACGTTTCTTCGAAAAGGTCGGCGCCCTTTTCGCTGCCATTGGTGTGTGCATCATATCAAGCCTTCTTCTTGTTCATCAGAACTTTGCTTGGAT
CTGTTGGTTGGCTTCTGCCTTCTCCTTGGTTGTCTTTGTTTTATCATTCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCAACTTCACACCAAACCTCTGTGGATATGAATGCACTTGCTTCCTTTATCAATACAATGAATCAAAGAAACAATGGAATCAGCATTTTTGCCACACCATCAGA
TTGCCTCCCAATCTGCATCAGAATGCAGCAGCAGAGGCCTCAACCAGCAGCCAGCAGCCCTCAGAATCTTGGCAAGACAATTCTTGGCCTTACTTTTCAGGCAGTTTTGG
CCTTGTTCATCAGCTCACCAAATTCATCTCCTCCACTTTTGACACATCTTTTTGGTGCTGCTGTGTTGATTAGCTTTGCCGTTTCATTTGCTGGTCTTTTCCTTCAAAAT
TCGTTCCCGAGAATCGCACGTTTCTTCGAAAAGGTCGGCGCCCTTTTCGCTGCCATTGGTGTGTGCATCATATCAAGCCTTCTTCTTGTTCATCAGAACTTTGCTTGGAT
CTGTTGGTTGGCTTCTGCCTTCTCCTTGGTTGTCTTTGTTTTATCATTCAAGTGA
Protein sequenceShow/hide protein sequence
MASTSHQTSVDMNALASFINTMNQRNNGISIFATPSDCLPICIRMQQQRPQPAASSPQNLGKTILGLTFQAVLALFISSPNSSPPLLTHLFGAAVLISFAVSFAGLFLQN
SFPRIARFFEKVGALFAAIGVCIISSLLLVHQNFAWICWLASAFSLVVFVLSFK