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Spg006863 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006863
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAuxin-responsive protein
Genome locationscaffold10:39787626..39794022
RNA-Seq ExpressionSpg006863
SyntenySpg006863
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR033389 - AUX/IAA domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050246.1 putative Ileal sodium/bile acid cotransporter [Cucumis melo var. makuwa]2.4e-3680.18Show/hide
Query:  MNELYSFIAAINERNPEI-GLPIWIRMQRPPPANS--PQNNLGKTILGLTFQAVLALFISSPSSYPPLFTHLFGAAVLISFAVSFAGLCLQNAFPRVALF
        MNELYSFI AINERNPEI  LPI I MQRP PANS   +NN+GKTILGLTFQAVLALFI+SP+S PPL THLF AAVLISFAVSFAG+ LQN FPR+AL 
Subjt:  MNELYSFIAAINERNPEI-GLPIWIRMQRPPPANS--PQNNLGKTILGLTFQAVLALFISSPSSYPPLFTHLFGAAVLISFAVSFAGLCLQNAFPRVALF

Query:  FGKIGALIAAI
        F KIGALIAAI
Subjt:  FGKIGALIAAI

KAG6579137.1 hypothetical protein SDJN03_23585, partial [Cucurbita argyrosperma subsp. sororia]6.9e-2063.44Show/hide
Query:  GLPIWIRMQRPPP---ANSPQNNLGKTILGLTFQAVLALFISSPSSYPPLFTHLFGAAVLISFAVSFAGLCLQNAFPRVALFFGKIGALIAAI
        GLP    M RPPP   ++  +NNLGK + GLTFQAVLALFIS P+S PPL  H+F AA+LISFA+S A L LQ A+PR+AL  GKIGAL+AAI
Subjt:  GLPIWIRMQRPPP---ANSPQNNLGKTILGLTFQAVLALFISSPSSYPPLFTHLFGAAVLISFAVSFAGLCLQNAFPRVALFFGKIGALIAAI

KGN49803.1 hypothetical protein Csa_004681 [Cucumis sativus]2.3e-3173.87Show/hide
Query:  MNELYSFIAAINERNPEI-GLPIWIRMQRPPPANS--PQNNLGKTILGLTFQAVLALFISSPSSYPPLFTHLFGAAVLISFAVSFAGLCLQNAFPRVALF
        MN LYS I +INERNPEI GLPI I MQ   PANS   +NN+G TILGLTFQAVLALFI+S +S PPL THLFGAAVLISFAVSF G+ LQ+ FPR+AL 
Subjt:  MNELYSFIAAINERNPEI-GLPIWIRMQRPPPANS--PQNNLGKTILGLTFQAVLALFISSPSSYPPLFTHLFGAAVLISFAVSFAGLCLQNAFPRVALF

Query:  FGKIGALIAAI
        F KIGALIAAI
Subjt:  FGKIGALIAAI

KGN49808.1 hypothetical protein Csa_004650 [Cucumis sativus]5.9e-1954.7Show/hide
Query:  MNELYSFIAAINERNPEIG--------LPIWIRMQRPPPANSPQN-NLGKTILGLTFQAVLALFISS-PSSYPPLFTHLFGAAVLISFAVSFAGLCLQNA
        M+   SFI  I++RN  +G        LP++IRMQ+ P A +  +  LGK IL L+FQAVLALFISS P+S PPL  H F AAV ISFAVSFA L L N+
Subjt:  MNELYSFIAAINERNPEIG--------LPIWIRMQRPPPANSPQN-NLGKTILGLTFQAVLALFISS-PSSYPPLFTHLFGAAVLISFAVSFAGLCLQNA

Query:  FPRVALFFGKIGALIAA
        FPR A  F K+GAL +A
Subjt:  FPRVALFFGKIGALIAA

XP_022146444.1 uncharacterized protein LOC111015658 [Momordica charantia]3.2e-2568.42Show/hide
Query:  MNELYSFIAAINERN--------------PEIGLPIWIRMQRPPPANSPQNNLGKTILGLTFQAVLALFISSPSSYPPLFTHLFGAAVLISFAVSFAGLC
        MN L SFI AINERN              P   LPI IRMQRPPPA S Q +LGKTILGLTFQAVLALFIS PSS P L T LFGAAVLISFAVSFAGL 
Subjt:  MNELYSFIAAINERN--------------PEIGLPIWIRMQRPPPANSPQNNLGKTILGLTFQAVLALFISSPSSYPPLFTHLFGAAVLISFAVSFAGLC

Query:  LQNAFPRVALFFGK
        LQ A+PR+AL F K
Subjt:  LQNAFPRVALFFGK

TrEMBL top hitse value%identityAlignment
A0A0A0KJN8 Uncharacterized protein1.1e-3173.87Show/hide
Query:  MNELYSFIAAINERNPEI-GLPIWIRMQRPPPANS--PQNNLGKTILGLTFQAVLALFISSPSSYPPLFTHLFGAAVLISFAVSFAGLCLQNAFPRVALF
        MN LYS I +INERNPEI GLPI I MQ   PANS   +NN+G TILGLTFQAVLALFI+S +S PPL THLFGAAVLISFAVSF G+ LQ+ FPR+AL 
Subjt:  MNELYSFIAAINERNPEI-GLPIWIRMQRPPPANS--PQNNLGKTILGLTFQAVLALFISSPSSYPPLFTHLFGAAVLISFAVSFAGLCLQNAFPRVALF

Query:  FGKIGALIAAI
        F KIGALIAAI
Subjt:  FGKIGALIAAI

A0A0A0KJP2 Uncharacterized protein2.8e-1954.7Show/hide
Query:  MNELYSFIAAINERNPEIG--------LPIWIRMQRPPPANSPQN-NLGKTILGLTFQAVLALFISS-PSSYPPLFTHLFGAAVLISFAVSFAGLCLQNA
        M+   SFI  I++RN  +G        LP++IRMQ+ P A +  +  LGK IL L+FQAVLALFISS P+S PPL  H F AAV ISFAVSFA L L N+
Subjt:  MNELYSFIAAINERNPEIG--------LPIWIRMQRPPPANSPQN-NLGKTILGLTFQAVLALFISS-PSSYPPLFTHLFGAAVLISFAVSFAGLCLQNA

Query:  FPRVALFFGKIGALIAA
        FPR A  F K+GAL +A
Subjt:  FPRVALFFGKIGALIAA

A0A5A7U7U1 Putative Ileal sodium/bile acid cotransporter1.1e-3680.18Show/hide
Query:  MNELYSFIAAINERNPEI-GLPIWIRMQRPPPANS--PQNNLGKTILGLTFQAVLALFISSPSSYPPLFTHLFGAAVLISFAVSFAGLCLQNAFPRVALF
        MNELYSFI AINERNPEI  LPI I MQRP PANS   +NN+GKTILGLTFQAVLALFI+SP+S PPL THLF AAVLISFAVSFAG+ LQN FPR+AL 
Subjt:  MNELYSFIAAINERNPEI-GLPIWIRMQRPPPANS--PQNNLGKTILGLTFQAVLALFISSPSSYPPLFTHLFGAAVLISFAVSFAGLCLQNAFPRVALF

Query:  FGKIGALIAAI
        F KIGALIAAI
Subjt:  FGKIGALIAAI

A0A5D3BEH8 Putative Ileal sodium/bile acid cotransporter1.2e-1747.9Show/hide
Query:  MNELYSFIAAINERNPEIG-----------LPIWIRMQRPPPANSPQNNLGKTILGLTFQAVLALFISSPSSYPPLFTHLFGAAVLISFAVSFAGLCLQN
        MNELYSFI A+  RNP I            LPI+I+MQRP P NSPQ   G T +   FQA+L LF++ P S PPL + L G  +L +F  SF G+ LQ 
Subjt:  MNELYSFIAAINERNPEIG-----------LPIWIRMQRPPPANSPQNNLGKTILGLTFQAVLALFISSPSSYPPLFTHLFGAAVLISFAVSFAGLCLQN

Query:  AFPRVALFFGKIGALIAAI
         FP++A      GAL+AAI
Subjt:  AFPRVALFFGKIGALIAAI

A0A6J1CY58 uncharacterized protein LOC1110156581.6e-2568.42Show/hide
Query:  MNELYSFIAAINERN--------------PEIGLPIWIRMQRPPPANSPQNNLGKTILGLTFQAVLALFISSPSSYPPLFTHLFGAAVLISFAVSFAGLC
        MN L SFI AINERN              P   LPI IRMQRPPPA S Q +LGKTILGLTFQAVLALFIS PSS P L T LFGAAVLISFAVSFAGL 
Subjt:  MNELYSFIAAINERN--------------PEIGLPIWIRMQRPPPANSPQNNLGKTILGLTFQAVLALFISSPSSYPPLFTHLFGAAVLISFAVSFAGLC

Query:  LQNAFPRVALFFGK
        LQ A+PR+AL F K
Subjt:  LQNAFPRVALFFGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGAACTCTATTCTTTCATCGCTGCAATTAACGAAAGAAATCCTGAAATCGGCCTTCCAATTTGGATCAGAATGCAGAGGCCTCCGCCAGCCAACAGCCCTCAGAA
TAATCTTGGGAAGACGATTCTTGGCCTTACTTTTCAGGCAGTTTTGGCCTTGTTCATCAGTTCACCCAGTTCATATCCTCCACTTTTTACACATCTCTTTGGGGCTGCTG
TGTTGATTAGCTTTGCGGTTTCATTTGCTGGTCTTTGCCTTCAAAATGCATTCCCGAGAGTCGCACTTTTTTTCGGAAAGATCGGTGCTCTTATTGCTGCAATTGCCGGT
CCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGATCATTGGTTCTTGAGCTTCTTCTATAAGAGACTCTGGAAGTTGCGTAGTGAGCATTATTATCATCTAGGAAA
TAAAGATGGCAGCATCAAGCTCTCTCTATGGTGGAAACCATTGGCAGGAACTGTGAATGCGAATCACTCTTCTGTCTTAATGGATAGATTCATAGTACGGATATTACTTA
TAGAGCCCCGGCCCACAACAAAAATGGAATTGCAGGAGACAATCGTTGAGAGGAGCCTGTGTACGAATGCTCCACTTTCAGGTTGTGATGATTTTAACGAAACGAACTAC
AACTTTGCTTCTGTGCTAGGGAAAGACGAAGAGAAGAGCCAAGCAGTAGTGGGGTGGCCGCCGATTGACTCGTGGAGGAAGAAGGCCCTTCACCGGCGCCCTCAGCCCGA
TCACACGAACCAAAACTCACTCTTTGTGAAGGTCAAAATGGAGGATCAAGCAATTGATCGCGACGGTTGGGATTTTACACTGATTTATGAAGACAAAGATGGAGGATTTT
ACGCAAAGGGGACGGCGGAGGCGTTCTTCGCGAAAGCTTCAACAGTAACATTGATCCTCGCCGTCCCCTTCGCCTCCGCCCTACCGTCGCCGGTGCTCCTCTCGCAGACA
ATCGCGCCGCCGTACACGAGACCGACAGTGCCGTCATCGAAATTTTTAGAGAGAGGAAGTGGTTTTAGAGAGAGAGAGAGAGGAGAGAGGAAGTGGGAAGAAGATAGGGG
AGTGGGGAAAGAGGAGAGAGAAACGATTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATGAACTCTATTCTTTCATCGCTGCAATTAACGAAAGAAATCCTGAAATCGGCCTTCCAATTTGGATCAGAATGCAGAGGCCTCCGCCAGCCAACAGCCCTCAGAA
TAATCTTGGGAAGACGATTCTTGGCCTTACTTTTCAGGCAGTTTTGGCCTTGTTCATCAGTTCACCCAGTTCATATCCTCCACTTTTTACACATCTCTTTGGGGCTGCTG
TGTTGATTAGCTTTGCGGTTTCATTTGCTGGTCTTTGCCTTCAAAATGCATTCCCGAGAGTCGCACTTTTTTTCGGAAAGATCGGTGCTCTTATTGCTGCAATTGCCGGT
CCCAAGCCCGGACAAAGGAGGAGGGTAGTGTCATCAGATCATTGGTTCTTGAGCTTCTTCTATAAGAGACTCTGGAAGTTGCGTAGTGAGCATTATTATCATCTAGGAAA
TAAAGATGGCAGCATCAAGCTCTCTCTATGGTGGAAACCATTGGCAGGAACTGTGAATGCGAATCACTCTTCTGTCTTAATGGATAGATTCATAGTACGGATATTACTTA
TAGAGCCCCGGCCCACAACAAAAATGGAATTGCAGGAGACAATCGTTGAGAGGAGCCTGTGTACGAATGCTCCACTTTCAGGTTGTGATGATTTTAACGAAACGAACTAC
AACTTTGCTTCTGTGCTAGGGAAAGACGAAGAGAAGAGCCAAGCAGTAGTGGGGTGGCCGCCGATTGACTCGTGGAGGAAGAAGGCCCTTCACCGGCGCCCTCAGCCCGA
TCACACGAACCAAAACTCACTCTTTGTGAAGGTCAAAATGGAGGATCAAGCAATTGATCGCGACGGTTGGGATTTTACACTGATTTATGAAGACAAAGATGGAGGATTTT
ACGCAAAGGGGACGGCGGAGGCGTTCTTCGCGAAAGCTTCAACAGTAACATTGATCCTCGCCGTCCCCTTCGCCTCCGCCCTACCGTCGCCGGTGCTCCTCTCGCAGACA
ATCGCGCCGCCGTACACGAGACCGACAGTGCCGTCATCGAAATTTTTAGAGAGAGGAAGTGGTTTTAGAGAGAGAGAGAGAGGAGAGAGGAAGTGGGAAGAAGATAGGGG
AGTGGGGAAAGAGGAGAGAGAAACGATTTTTTAA
Protein sequenceShow/hide protein sequence
MNELYSFIAAINERNPEIGLPIWIRMQRPPPANSPQNNLGKTILGLTFQAVLALFISSPSSYPPLFTHLFGAAVLISFAVSFAGLCLQNAFPRVALFFGKIGALIAAIAG
PKPGQRRRVVSSDHWFLSFFYKRLWKLRSEHYYHLGNKDGSIKLSLWWKPLAGTVNANHSSVLMDRFIVRILLIEPRPTTKMELQETIVERSLCTNAPLSGCDDFNETNY
NFASVLGKDEEKSQAVVGWPPIDSWRKKALHRRPQPDHTNQNSLFVKVKMEDQAIDRDGWDFTLIYEDKDGGFYAKGTAEAFFAKASTVTLILAVPFASALPSPVLLSQT
IAPPYTRPTVPSSKFLERGSGFRERERGERKWEEDRGVGKEERETIF