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Spg006894 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006894
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like
Genome locationscaffold10:39438708..39440935
RNA-Seq ExpressionSpg006894
SyntenySpg006894
Gene Ontology termsGO:0009083 - branched-chain amino acid catabolic process (biological process)
GO:0005947 - mitochondrial alpha-ketoglutarate dehydrogenase complex (cellular component)
GO:0016020 - membrane (cellular component)
GO:0016624 - oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor (molecular function)
InterPro domainsIPR001017 - Dehydrogenase, E1 component
IPR029061 - Thiamin diphosphate-binding fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592162.1 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.4e-2371.95Show/hide
Query:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQI---------RVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSK
        +VKGQ YGI+SIRIDGNDAL VYSA+RRAR M +AEQ+         RVGHHSTSDDSSK RA+DEIE+WKMERNPV+RF+K
Subjt:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQI---------RVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSK

XP_022153717.1 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like isoform X1 [Momordica charantia]6.4e-2471.26Show/hide
Query:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWVPT
        +VKGQAYGI+SIRIDGNDAL VY+AIRRAR M +AEQ          RVGHHSTSDDSSK RA+DEI+YWKMERNPV+RFS  W+ T
Subjt:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWVPT

XP_022153718.1 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like isoform X2 [Momordica charantia]6.4e-2471.26Show/hide
Query:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWVPT
        +VKGQAYGI+SIRIDGNDAL VY+AIRRAR M +AEQ          RVGHHSTSDDSSK RA+DEI+YWKMERNPV+RFS  W+ T
Subjt:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWVPT

XP_022936690.1 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like [Cucurbita moschata]1.4e-2371.95Show/hide
Query:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQI---------RVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSK
        +VKGQ YGI+SIRIDGNDAL VYSA+RRAR M +AEQ+         RVGHHSTSDDSSK RA+DEIE+WKMERNPV+RF+K
Subjt:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQI---------RVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSK

XP_038885350.1 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial [Benincasa hispida]1.3e-2475.61Show/hide
Query:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQI---------RVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSK
        +VKGQ YGI+SIRIDGNDAL VYSA+RRAR M IAEQ+         RVGHHSTSDDSSK RAIDEI+YWKMERNPVDRF+K
Subjt:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQI---------RVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSK

TrEMBL top hitse value%identityAlignment
A0A5A7V005 2-oxoisovalerate dehydrogenase subunit alpha 18.4e-2265.88Show/hide
Query:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQI---------RVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWV
        +VKGQ YGI+SIRIDGNDAL VY+A+ +AR M I E++         RVGHHSTSDDSSK R  DEI+YWKMERNPVDRF+K W+
Subjt:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQI---------RVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWV

A0A6J1DI76 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like isoform X23.1e-2471.26Show/hide
Query:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWVPT
        +VKGQAYGI+SIRIDGNDAL VY+AIRRAR M +AEQ          RVGHHSTSDDSSK RA+DEI+YWKMERNPV+RFS  W+ T
Subjt:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWVPT

A0A6J1DJQ4 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like isoform X13.1e-2471.26Show/hide
Query:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWVPT
        +VKGQAYGI+SIRIDGNDAL VY+AIRRAR M +AEQ          RVGHHSTSDDSSK RA+DEI+YWKMERNPV+RFS  W+ T
Subjt:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWVPT

A0A6J1FEF0 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like6.9e-2471.95Show/hide
Query:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQI---------RVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSK
        +VKGQ YGI+SIRIDGNDAL VYSA+RRAR M +AEQ+         RVGHHSTSDDSSK RA+DEIE+WKMERNPV+RF+K
Subjt:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQI---------RVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSK

A0A6J1IJ53 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial-like5.8e-2368.29Show/hide
Query:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQI---------RVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSK
        +VKGQ YGI+SIRIDGNDAL +YSA+R+AR M +AE++         RVGHHSTSDDSSK RA+DEIE+WKMERNPV+RF+K
Subjt:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQI---------RVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSK

SwissProt top hitse value%identityAlignment
A5A6H9 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial2.8e-1448.05Show/hide
Query:  KGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDR
        +G  YGI SIR+DGND   VY+A + AR   +AE           R+GHHSTSDDSS  R++DE+ YW  + +PV R
Subjt:  KGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDR

F4KIN4 Putative 2-dehydropantoate 2-reductase6.2e-2264.63Show/hide
Query:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSK
        +VKGQAYGI+SIR+DGNDAL VYSA+  AR M + EQ          RVGHHSTSDDS+K RA DEI+YWKM RN V+RF K
Subjt:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSK

P50136 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial2.8e-1446.75Show/hide
Query:  KGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDR
        +G  YGI+SIR+DGND   VY+A + AR   +AE           R+GHHSTSDDSS  R++DE+ YW  + +P+ R
Subjt:  KGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDR

Q84JL2 2-oxoisovalerate dehydrogenase subunit alpha 2, mitochondrial3.7e-1951.52Show/hide
Query:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWVPTK--YSSAFTSDL
        +VKG+AYGI+SIR+DGNDAL +YSA+  AR M I EQ          RVGHHSTSDDS++ R+  EIE+W   RNP+ RF + W+ +   +S    SDL
Subjt:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWVPTK--YSSAFTSDL

Q9LPL5 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial3.9e-2467.06Show/hide
Query:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWV
        +VKGQAYGI+SIR+DGNDAL VYSA+R AR M + EQ          RVGHHSTSDDS+K RA DEI+YWKM RNPV+RF K WV
Subjt:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWV

Arabidopsis top hitse value%identityAlignment
AT1G21400.1 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein2.7e-2567.06Show/hide
Query:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWV
        +VKGQAYGI+SIR+DGNDAL VYSA+R AR M + EQ          RVGHHSTSDDS+K RA DEI+YWKM RNPV+RF K WV
Subjt:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWV

AT5G09300.1 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein2.7e-2051.52Show/hide
Query:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWVPTK--YSSAFTSDL
        +VKG+AYGI+SIR+DGNDAL +YSA+  AR M I EQ          RVGHHSTSDDS++ R+  EIE+W   RNP+ RF + W+ +   +S    SDL
Subjt:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWVPTK--YSSAFTSDL

AT5G09300.2 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein2.7e-2051.52Show/hide
Query:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWVPTK--YSSAFTSDL
        +VKG+AYGI+SIR+DGNDAL +YSA+  AR M I EQ          RVGHHSTSDDS++ R+  EIE+W   RNP+ RF + W+ +   +S    SDL
Subjt:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWVPTK--YSSAFTSDL

AT5G34780.1 Thiamin diphosphate-binding fold (THDP-binding) superfamily protein4.4e-2364.63Show/hide
Query:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSK
        +VKGQAYGI+SIR+DGNDAL VYSA+  AR M + EQ          RVGHHSTSDDS+K RA DEI+YWKM RN V+RF K
Subjt:  MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQ---------IRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAAGGTCAGGCCTACGGAATCCAAAGCATCAGGATCGATGGCAACGATGCCCTAGTAGTTTACAGTGCCATTCGCAGAGCTCGAGGAATGGTGATTGCGGAGCA
GATTCGAGTTGGCCACCATTCCACCTCCGATGATTCGAGTAAGTGTCGCGCCATTGATGAGATTGAGTACTGGAAAATGGAGAGGAACCCTGTGGATCGATTTTCCAAGC
TTTGGGTACCTACTAAGTATAGCTCTGCATTCACATCTGACCTAATAGGGATCATATTGACTCTCTTTCTAAAGAAGGATCGGGAGGGAGACATGCTTATCTGCTTAACG
CTCTTGAGTTCTCTGGTTGCAAAAATCTTATATTGTGGTTTTGATTTTGAGTTCACCCTTGGGTGCCTTGCTCATCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAAGGTCAGGCCTACGGAATCCAAAGCATCAGGATCGATGGCAACGATGCCCTAGTAGTTTACAGTGCCATTCGCAGAGCTCGAGGAATGGTGATTGCGGAGCA
GATTCGAGTTGGCCACCATTCCACCTCCGATGATTCGAGTAAGTGTCGCGCCATTGATGAGATTGAGTACTGGAAAATGGAGAGGAACCCTGTGGATCGATTTTCCAAGC
TTTGGGTACCTACTAAGTATAGCTCTGCATTCACATCTGACCTAATAGGGATCATATTGACTCTCTTTCTAAAGAAGGATCGGGAGGGAGACATGCTTATCTGCTTAACG
CTCTTGAGTTCTCTGGTTGCAAAAATCTTATATTGTGGTTTTGATTTTGAGTTCACCCTTGGGTGCCTTGCTCATCAATGA
Protein sequenceShow/hide protein sequence
MVKGQAYGIQSIRIDGNDALVVYSAIRRARGMVIAEQIRVGHHSTSDDSSKCRAIDEIEYWKMERNPVDRFSKLWVPTKYSSAFTSDLIGIILTLFLKKDREGDMLICLT
LLSSLVAKILYCGFDFEFTLGCLAHQ