; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg006906 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006906
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionChlorophyll a-b binding protein, chloroplastic
Genome locationscaffold10:39552294..39553750
RNA-Seq ExpressionSpg006906
SyntenySpg006906
Gene Ontology termsGO:0009416 - response to light stimulus (biological process)
GO:0009768 - photosynthesis, light harvesting in photosystem I (biological process)
GO:0018298 - protein-chromophore linkage (biological process)
GO:0009522 - photosystem I (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0016168 - chlorophyll binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001344 - Chlorophyll A-B binding protein, plant and chromista
IPR022796 - Chlorophyll A-B binding protein
IPR023329 - Chlorophyll a/b binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYJ96496.1 chlorophyll a-b binding protein 6A [Cucumis melo var. makuwa]1.2e-8980.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMS EWMPGQPRPPYL GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEH  + +                              K ++  RLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA

Query:  LLAFVGFCVQQSAYPGTGP
        LLAFVGFCVQQSAYPGTGP
Subjt:  LLAFVGFCVQQSAYPGTGP

XP_004143800.1 chlorophyll a-b binding protein 6A, chloroplastic [Cucumis sativus]1.3e-8879.45Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMSAEWMPGQPRPPYL GSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEH  + +                              K ++  RLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA

Query:  LLAFVGFCVQQSAYPGTGP
        LLAFVGFCVQQSAYPGTGP
Subjt:  LLAFVGFCVQQSAYPGTGP

XP_008453995.1 PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic [Cucumis melo]5.4e-9080.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMS+EWMPGQPRPPYL GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEH  + +                              K ++  RLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA

Query:  LLAFVGFCVQQSAYPGTGP
        LLAFVGFCVQQSAYPGTGP
Subjt:  LLAFVGFCVQQSAYPGTGP

XP_022133484.1 chlorophyll a-b binding protein 6A, chloroplastic [Momordica charantia]2.1e-8979.91Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGV  NASSRFSMSAEWMPGQPRPPYL GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEH  + +                              K ++  RLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA

Query:  LLAFVGFCVQQSAYPGTGP
        LLAFVGFCVQQSAYPGTGP
Subjt:  LLAFVGFCVQQSAYPGTGP

XP_038891246.1 chlorophyll a-b binding protein 6A, chloroplastic [Benincasa hispida]4.2e-9080.82Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL GS+PGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA
        PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEH  + +                              K ++  RLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA

Query:  LLAFVGFCVQQSAYPGTGP
        LLAFVGFCVQQSAYPGTGP
Subjt:  LLAFVGFCVQQSAYPGTGP

TrEMBL top hitse value%identityAlignment
A0A0A0KNM4 Chlorophyll a-b binding protein, chloroplastic6.5e-8979.45Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFA  VPISGVAVNASSRFSMSAEWMPGQPRPPYL GSAPGDFGFDPL LGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEH  + +                              K ++  RLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA

Query:  LLAFVGFCVQQSAYPGTGP
        LLAFVGFCVQQSAYPGTGP
Subjt:  LLAFVGFCVQQSAYPGTGP

A0A1S3BYE0 Chlorophyll a-b binding protein, chloroplastic2.6e-9080.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMS+EWMPGQPRPPYL GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEH  + +                              K ++  RLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA

Query:  LLAFVGFCVQQSAYPGTGP
        LLAFVGFCVQQSAYPGTGP
Subjt:  LLAFVGFCVQQSAYPGTGP

A0A5A7TXV7 Chlorophyll a-b binding protein, chloroplastic2.6e-9080.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMS+EWMPGQPRPPYL GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEH  + +                              K ++  RLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA

Query:  LLAFVGFCVQQSAYPGTGP
        LLAFVGFCVQQSAYPGTGP
Subjt:  LLAFVGFCVQQSAYPGTGP

A0A5D3BC57 Chlorophyll a-b binding protein, chloroplastic5.9e-9080.37Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMS EWMPGQPRPPYL GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEH  + +                              K ++  RLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA

Query:  LLAFVGFCVQQSAYPGTGP
        LLAFVGFCVQQSAYPGTGP
Subjt:  LLAFVGFCVQQSAYPGTGP

A0A6J1BW39 Chlorophyll a-b binding protein, chloroplastic1.0e-8979.91Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGV  NASSRFSMSAEWMPGQPRPPYL GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA
        PGILVPEALGLGNWVKAQEWAA+PGGQATYLGQPVPWGTLPTILVIEFLAIAFVEH  + +                              K ++  RLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA

Query:  LLAFVGFCVQQSAYPGTGP
        LLAFVGFCVQQSAYPGTGP
Subjt:  LLAFVGFCVQQSAYPGTGP

SwissProt top hitse value%identityAlignment
P12360 Chlorophyll a-b binding protein 6A, chloroplastic1.2e-7669.86Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV
        MASNTLMSCGI     PS LSS+KSKFAAA+P+   A N  SRFSMSA+WMPGQPRP YL GSAPGDFGFD L LGEVP NLER+KESELIHCRWAMLAV
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAV

Query:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA
        PGI+VPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTIL IEFLAIAFVEH  + +                              K ++  RLA
Subjt:  PGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLA

Query:  LLAFVGFCVQQSAYPGTGP
        LLA VGFCVQQSAY GTGP
Subjt:  LLAFVGFCVQQSAYPGTGP

P27521 Chlorophyll a-b binding protein 4, chloroplastic4.9e-1731.7Show/hide
Query:  TAFPSVLSSSKSKFAAAVPISGVAVNA-SSRFSMSA---EWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEAL
        T+ P  L+ S  +    +  + +  +A +S F + A   EW+PG   P YL GS  GD GFDPL L E PENL+ F ++EL++ RWAML V G+L+PE  
Subjt:  TAFPSVLSSSKSKFAAAVPISGVAVNA-SSRFSMSA---EWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEAL

Query:  GLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVE-------------------------------------------HHAAWKKTLRR
             +   EW     G+  Y      + +  T+ VIEF+   +VE                                              A +K L  
Subjt:  GLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVE-------------------------------------------HHAAWKKTLRR

Query:  SRLALLAFVGFCVQQSAYPGTGPF
         RLA+LAF+GF VQ +   G GPF
Subjt:  SRLALLAFVGFCVQQSAYPGTGPF

Q01667 Chlorophyll a-b binding protein 6, chloroplastic6.3e-7366.82Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA   +PS+LSSSKSKF +A VP+         R  M+A WMPG+PRP YL GSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRL
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEH  + +                              K ++  RL
Subjt:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRL

Query:  ALLAFVGFCVQQSAYPGTGP
        ALLAFVGFCVQQSAYPGTGP
Subjt:  ALLAFVGFCVQQSAYPGTGP

Q9SDM1 Chlorophyll a-b binding protein 1B-21, chloroplastic3.2e-6157.34Show/hide
Query:  ASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVP
        +S+ L SC  +    PS+L+ S     + +P    A   S R +MSAEW PGQPRP +L GS+PGDFGFDPL L  VPEN ERFKESE+ HCRWAML VP
Subjt:  ASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVP

Query:  GILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLAL
        G+LVPEALGLGNWVKAQEWAA+P GQATYLG PVPWG LPTIL IEFLAIAF E     +                              K ++  RLA+
Subjt:  GILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRLAL

Query:  LAFVGFCVQQSAYPGTGP
        LAFVGFCVQQSAYPGTGP
Subjt:  LAFVGFCVQQSAYPGTGP

Q9SQL2 Chlorophyll a-b binding protein P4, chloroplastic9.8e-1832.26Show/hide
Query:  LSSSKSKFAAAVPISGVAVNASSRFSMSA---EWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVK
        L  S  K    V    V  + S+ F + A   EW+PG   P YL GS PGD GFDPL L E PENL  F ++EL++ RWAML V G+L+PE       + 
Subjt:  LSSSKSKFAAAVPISGVAVNASSRFSMSA---EWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVK

Query:  AQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHH-------------------------------------------AAWKKTLRRSRLALLA
          +W A   G+  Y      + +  T+ VIEF+   +VE                                              A +K +   RLA+LA
Subjt:  AQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHH-------------------------------------------AAWKKTLRRSRLALLA

Query:  FVGFCVQQSAYPGTGPF
        F+GF +Q +   G GPF
Subjt:  FVGFCVQQSAYPGTGPF

Arabidopsis top hitse value%identityAlignment
AT3G47470.1 light-harvesting chlorophyll-protein complex I subunit A43.5e-1831.7Show/hide
Query:  TAFPSVLSSSKSKFAAAVPISGVAVNA-SSRFSMSA---EWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEAL
        T+ P  L+ S  +    +  + +  +A +S F + A   EW+PG   P YL GS  GD GFDPL L E PENL+ F ++EL++ RWAML V G+L+PE  
Subjt:  TAFPSVLSSSKSKFAAAVPISGVAVNA-SSRFSMSA---EWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEAL

Query:  GLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVE-------------------------------------------HHAAWKKTLRR
             +   EW     G+  Y      + +  T+ VIEF+   +VE                                              A +K L  
Subjt:  GLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVE-------------------------------------------HHAAWKKTLRR

Query:  SRLALLAFVGFCVQQSAYPGTGPF
         RLA+LAF+GF VQ +   G GPF
Subjt:  SRLALLAFVGFCVQQSAYPGTGPF

AT3G54890.1 photosystem I light harvesting complex gene 14.5e-7466.82Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA   +PS+LSSSKSKF +A VP+         R  M+A WMPG+PRP YL GSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRL
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEH  + +                              K ++  RL
Subjt:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWK------------------------------KTLRRSRL

Query:  ALLAFVGFCVQQSAYPGTGP
        ALLAFVGFCVQQSAYPGTGP
Subjt:  ALLAFVGFCVQQSAYPGTGP

AT3G54890.2 photosystem I light harvesting complex gene 14.5e-7475.79Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA   +PS+LSSSKSKF +A VP+         R  M+A WMPG+PRP YL GSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWKKTLRRSRLALLAFVGFCVQQSAYPGTGP
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAF        K ++  RLALLAFVGFCVQQSAYPGTGP
Subjt:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWKKTLRRSRLALLAFVGFCVQQSAYPGTGP

AT3G54890.3 photosystem I light harvesting complex gene 12.1e-6078.15Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA   +PS+LSSSKSKF +A VP+         R  M+A WMPG+PRP YL GSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLA
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLA
Subjt:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLA

AT3G54890.4 photosystem I light harvesting complex gene 11.1e-6476.69Show/hide
Query:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA
        MASN+LMSCGIA   +PS+LSSSKSKF +A VP+         R  M+A WMPG+PRP YL GSAPGDFGFDPL LGEVP NLER+KESELIHCRWAMLA
Subjt:  MASNTLMSCGIATTAFPSVLSSSKSKF-AAAVPISGVAVNASSRFSMSAEWMPGQPRPPYL-GSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLA

Query:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWKK
        VPGILVPEALG GNWVKAQEWAA+PGGQATYLG PVPWGTLPTIL IEFLAIAFVEH  + +K
Subjt:  VPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAACACCTTGATGAGCTGCGGCATTGCCACCACCGCCTTCCCTTCTGTCCTATCTTCCTCCAAGTCTAAATTCGCCGCCGCTGTCCCGATTTCCGGCGTCGC
CGTCAATGCCTCCTCGCGCTTCTCCATGTCCGCCGAGTGGATGCCCGGACAGCCCCGCCCGCCGTACCTCGGCTCTGCCCCCGGTGATTTTGGCTTTGACCCTCTTCGGT
TGGGAGAAGTGCCAGAGAATCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGAATTTTGGTACCTGAGGCGTTGGGATTG
GGCAATTGGGTGAAAGCTCAGGAATGGGCAGCCATTCCAGGAGGCCAAGCTACCTACTTGGGGCAACCAGTTCCATGGGGAACTTTGCCTACCATTTTGGTCATTGAGTT
CCTTGCCATTGCCTTCGTAGAGCACCACGCAGCATGGAAAAAGACCCTGAGAAGAAGTCGGTTGGCGCTGTTGGCTTTTGTTGGGTTCTGTGTGCAACAATCGGCATACC
CAGGAACAGGGCCATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAACACCTTGATGAGCTGCGGCATTGCCACCACCGCCTTCCCTTCTGTCCTATCTTCCTCCAAGTCTAAATTCGCCGCCGCTGTCCCGATTTCCGGCGTCGC
CGTCAATGCCTCCTCGCGCTTCTCCATGTCCGCCGAGTGGATGCCCGGACAGCCCCGCCCGCCGTACCTCGGCTCTGCCCCCGGTGATTTTGGCTTTGACCCTCTTCGGT
TGGGAGAAGTGCCAGAGAATCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGAATTTTGGTACCTGAGGCGTTGGGATTG
GGCAATTGGGTGAAAGCTCAGGAATGGGCAGCCATTCCAGGAGGCCAAGCTACCTACTTGGGGCAACCAGTTCCATGGGGAACTTTGCCTACCATTTTGGTCATTGAGTT
CCTTGCCATTGCCTTCGTAGAGCACCACGCAGCATGGAAAAAGACCCTGAGAAGAAGTCGGTTGGCGCTGTTGGCTTTTGTTGGGTTCTGTGTGCAACAATCGGCATACC
CAGGAACAGGGCCATTTTAG
Protein sequenceShow/hide protein sequence
MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGL
GNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWKKTLRRSRLALLAFVGFCVQQSAYPGTGPF