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Spg006917 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006917
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionformin-like protein 3
Genome locationscaffold10:38168401..38168826
RNA-Seq ExpressionSpg006917
SyntenySpg006917
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150475.1 leucine-rich repeat extensin-like protein 6 [Cucumis sativus]1.4e-4277.3Show/hide
Query:  MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPS
        MLPLK LLFL FL LIS  SA  +   RRLDDT   TTP DP VKCAPCEQNPPSPPPP VYPSPPPPSPPPPDV+PYYSPPPPKKK+ K  NCPPPP  
Subjt:  MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPS

Query:  SFTYITGPPGELYPIDENYNAAGRRSAAAAVVGLALAGLLL
        SF YITGPPG+LYPID+ YNAAGRRS AA VVG+ LAGLLL
Subjt:  SFTYITGPPGELYPIDENYNAAGRRSAAAAVVGLALAGLLL

XP_008467156.1 PREDICTED: extensin-like [Cucumis melo]1.4e-4579.43Show/hide
Query:  MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPS
        MLPLK LLFL FL LIS  SA  +A  RRLDDT   TTP DP VKCAPCEQNPPSPPPP VYPSPPPPSPPPPDV+PYYSPPPPKKK+ K+ NCPPPP  
Subjt:  MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPS

Query:  SFTYITGPPGELYPIDENYNAAGRRSAAAAVVGLALAGLLL
        SF YITGPPG+LYPID+NYNAAGRRSAAAA VG+ LAGLLL
Subjt:  SFTYITGPPGELYPIDENYNAAGRRSAAAAVVGLALAGLLL

XP_022152315.1 acrosin [Momordica charantia]4.3e-3974.83Show/hide
Query:  MLPLKSLLFLTFLFLIS-SYSAAAAAAARRLDDT-AVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPP
        MLPLKSLLFL  L LIS S +AAA+AAAR LD+  AVP+T  DPTVKCAPC+QNPPS PPPP+YPSPPPPSPPPPDVLPYYSPPPPKK  + D NCPPPP
Subjt:  MLPLKSLLFLTFLFLIS-SYSAAAAAAARRLDDT-AVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPP

Query:  -PSSFTYITGPPGELYPIDENYNAAGR---RSAAAAVVGLALAGLLL
         P SFTYITGPPG+LYPID++YNAA R    +AAAAVVGL L GL +
Subjt:  -PSSFTYITGPPGELYPIDENYNAAGR---RSAAAAVVGLALAGLLL

XP_022989990.1 leucine-rich repeat extensin-like protein 3 [Cucurbita maxima]1.3e-4072.92Show/hide
Query:  MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPS
        MLP  SLLFLT L LIS   ++++AA RRLDDT V  TPADPTVKC+PCEQNPPS PPPPVYPSPPPPSPPPPDV+ YYSPPPP KKDHK+ +CPPPP  
Subjt:  MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPS

Query:  SFTYITGPPGELYPIDENYNAAGRR---SAAAAVVGLALAGLLL
        +F YITGPPG+LYPID+NYNAA RR   +AA+AV+GLA+AG+L+
Subjt:  SFTYITGPPGELYPIDENYNAAGRR---SAAAAVVGLALAGLLL

XP_023520933.1 extensin [Cucurbita pepo subsp. pepo]7.3e-3970.34Show/hide
Query:  MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPS--PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPP
        MLP  SLLFLT L LIS   ++++AA RRLDD     TP DPTVKC+PCEQNPPS  PPPPVYPSPPPPSPPPPDV+ YYSPPPP KKDHK+ +CPPPP 
Subjt:  MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPS--PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPP

Query:  SSFTYITGPPGELYPIDENYNAAGRR---SAAAAVVGLALAGLLL
         +F YITGPPG+LYPID+NYNAA RR   +AA+AV+GLA+AG+L+
Subjt:  SSFTYITGPPGELYPIDENYNAAGRR---SAAAAVVGLALAGLLL

TrEMBL top hitse value%identityAlignment
A0A0A0KPJ1 Uncharacterized protein6.8e-4377.3Show/hide
Query:  MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPS
        MLPLK LLFL FL LIS  SA  +   RRLDDT   TTP DP VKCAPCEQNPPSPPPP VYPSPPPPSPPPPDV+PYYSPPPPKKK+ K  NCPPPP  
Subjt:  MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPS

Query:  SFTYITGPPGELYPIDENYNAAGRRSAAAAVVGLALAGLLL
        SF YITGPPG+LYPID+ YNAAGRRS AA VVG+ LAGLLL
Subjt:  SFTYITGPPGELYPIDENYNAAGRRSAAAAVVGLALAGLLL

A0A1S3CT22 extensin-like6.6e-4679.43Show/hide
Query:  MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPS
        MLPLK LLFL FL LIS  SA  +A  RRLDDT   TTP DP VKCAPCEQNPPSPPPP VYPSPPPPSPPPPDV+PYYSPPPPKKK+ K+ NCPPPP  
Subjt:  MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPP-VYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPS

Query:  SFTYITGPPGELYPIDENYNAAGRRSAAAAVVGLALAGLLL
        SF YITGPPG+LYPID+NYNAAGRRSAAAA VG+ LAGLLL
Subjt:  SFTYITGPPGELYPIDENYNAAGRRSAAAAVVGLALAGLLL

A0A6J1DDL2 acrosin2.1e-3974.83Show/hide
Query:  MLPLKSLLFLTFLFLIS-SYSAAAAAAARRLDDT-AVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPP
        MLPLKSLLFL  L LIS S +AAA+AAAR LD+  AVP+T  DPTVKCAPC+QNPPS PPPP+YPSPPPPSPPPPDVLPYYSPPPPKK  + D NCPPPP
Subjt:  MLPLKSLLFLTFLFLIS-SYSAAAAAAARRLDDT-AVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPP

Query:  -PSSFTYITGPPGELYPIDENYNAAGR---RSAAAAVVGLALAGLLL
         P SFTYITGPPG+LYPID++YNAA R    +AAAAVVGL L GL +
Subjt:  -PSSFTYITGPPGELYPIDENYNAAGR---RSAAAAVVGLALAGLLL

A0A6J1GMY1 extensin1.3e-3870.83Show/hide
Query:  MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPS
        MLP  SLLFL  L LIS   ++++AA RRLDD     TPADPTVKC+PCEQNPPS PPPPVYPSPPPPSPPPPDV+ YYSPPPP KKDHK+ +CPPPP  
Subjt:  MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPS

Query:  SFTYITGPPGELYPIDENYNAAGRR---SAAAAVVGLALAGLLL
        +F YITGPPG+LYPID++YNAA RR   +AA+AVVGLA+AG+L+
Subjt:  SFTYITGPPGELYPIDENYNAAGRR---SAAAAVVGLALAGLLL

A0A6J1JNW0 leucine-rich repeat extensin-like protein 36.4e-4172.92Show/hide
Query:  MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPS
        MLP  SLLFLT L LIS   ++++AA RRLDDT V  TPADPTVKC+PCEQNPPS PPPPVYPSPPPPSPPPPDV+ YYSPPPP KKDHK+ +CPPPP  
Subjt:  MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPS-PPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPS

Query:  SFTYITGPPGELYPIDENYNAAGRR---SAAAAVVGLALAGLLL
        +F YITGPPG+LYPID+NYNAA RR   +AA+AV+GLA+AG+L+
Subjt:  SFTYITGPPGELYPIDENYNAAGRR---SAAAAVVGLALAGLLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02405.1 proline-rich family protein3.9e-0652.22Show/hide
Query:  ADPTVKCAPCEQN----PPSPPPP-VYPSPPPPSPPPP---DVLPYYSPPPPKKKDHKDTNCPPPPPSSFTYITGPPGELYPIDENYNAA
        A+  V C PC QN    PPSPPPP   PSPPPPSPPPP      P   PPPP          PPPP   FTY   PPG+LYPI+  Y AA
Subjt:  ADPTVKCAPCEQN----PPSPPPP-VYPSPPPPSPPPP---DVLPYYSPPPPKKKDHKDTNCPPPPPSSFTYITGPPGELYPIDENYNAA

AT1G23040.1 hydroxyproline-rich glycoprotein family protein2.3e-1450Show/hide
Query:  SYSAAAAAAARRLDDTAVPTTPADPTVKCAP-CEQNPPSPPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPSSFTYITGPPGELYPIDE
        S S+ A+  AR+LD+        DP +KC+P C QNPP P PP  PSPPPP+ PPP  LP   PPPPKK     + CPPPPP++F YITGPPG LYP+DE
Subjt:  SYSAAAAAAARRLDDTAVPTTPADPTVKCAP-CEQNPPSPPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPSSFTYITGPPGELYPIDE

Query:  NYN-AAGRRSAAAAVVGLALAGLL
         +  AAG+      + GL   G++
Subjt:  NYN-AAGRRSAAAAVVGLALAGLL

AT1G70990.1 proline-rich family protein5.8e-1045.77Show/hide
Query:  LKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQN--PPSPPPPVYPSPPPPS---PPPPDVLPYYSPPPPKKKDHKDTNCPPPPP
        L +++FLTF  +I   +A+ ++  R+L++        DP +KC PC QN  PPSPPP   PSPPPPS   PPPP  LP   P PPKK     + C PPPP
Subjt:  LKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQN--PPSPPPPVYPSPPPPS---PPPPDVLPYYSPPPPKKKDHKDTNCPPPPP

Query:  SSFTYITGPPGELYPIDENYNAAGRRS-AAAAVVGLALAGLL
        S++ Y+TGPPGELYPID+ + AA  +S     + GL   G++
Subjt:  SSFTYITGPPGELYPIDENYNAAGRRS-AAAAVVGLALAGLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTCCTCTCAAATCCCTCCTCTTTCTCACTTTCCTCTTCCTAATTTCCTCCTACTCCGCCGCCGCCGCCGCCGCCGCTCGCCGCCTCGACGACACCGCCGTCCCGAC
CACCCCCGCCGACCCCACCGTCAAGTGTGCCCCATGCGAACAAAACCCCCCATCTCCGCCGCCGCCGGTCTACCCCTCGCCGCCTCCGCCGTCTCCTCCGCCGCCCGACG
TCCTCCCCTACTACTCTCCCCCACCCCCCAAGAAGAAGGACCACAAGGACACCAACTGTCCCCCGCCACCGCCGTCCTCCTTCACCTACATAACTGGCCCTCCCGGCGAA
CTCTATCCCATCGACGAAAACTATAACGCCGCCGGCCGGAGATCCGCCGCCGCCGCCGTGGTTGGGTTGGCTTTGGCTGGGCTTCTGCTGGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCTTCCTCTCAAATCCCTCCTCTTTCTCACTTTCCTCTTCCTAATTTCCTCCTACTCCGCCGCCGCCGCCGCCGCCGCTCGCCGCCTCGACGACACCGCCGTCCCGAC
CACCCCCGCCGACCCCACCGTCAAGTGTGCCCCATGCGAACAAAACCCCCCATCTCCGCCGCCGCCGGTCTACCCCTCGCCGCCTCCGCCGTCTCCTCCGCCGCCCGACG
TCCTCCCCTACTACTCTCCCCCACCCCCCAAGAAGAAGGACCACAAGGACACCAACTGTCCCCCGCCACCGCCGTCCTCCTTCACCTACATAACTGGCCCTCCCGGCGAA
CTCTATCCCATCGACGAAAACTATAACGCCGCCGGCCGGAGATCCGCCGCCGCCGCCGTGGTTGGGTTGGCTTTGGCTGGGCTTCTGCTGGGTTAA
Protein sequenceShow/hide protein sequence
MLPLKSLLFLTFLFLISSYSAAAAAAARRLDDTAVPTTPADPTVKCAPCEQNPPSPPPPVYPSPPPPSPPPPDVLPYYSPPPPKKKDHKDTNCPPPPPSSFTYITGPPGE
LYPIDENYNAAGRRSAAAAVVGLALAGLLLG