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Spg006924 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg006924
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold10:37914739..37915617
RNA-Seq ExpressionSpg006924
SyntenySpg006924
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_010686140.1 PREDICTED: uncharacterized protein LOC104900422 [Beta vulgaris subsp. vulgaris]9.8e-0440.35Show/hide
Query:  DFKAPFAEVKAILEGLQMAKSLGCGKVVIESDCAQAVKCVSRRNEVWGKLEPVIEDI
        +++ P AE +A+LEG+ MAK+LG  KV+IESDC + V+ + ++ +       +I+DI
Subjt:  DFKAPFAEVKAILEGLQMAKSLGCGKVVIESDCAQAVKCVSRRNEVWGKLEPVIEDI
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCTTCATCTTCCTTCATGGACATGGATTTCAAAGCCCCTTTTGCGGAGGTGAAGGCAATTCTTGAAGGGCTGCAAATGGCTAAATCGCTTGGTTGTGGAAAAGT
AGTAATTGAATCTGATTGTGCTCAAGCGGTGAAATGTGTGTCAAGGCGTAATGAGGTTTGGGGTAAGCTGGAGCCTGTTATTGAAGACATTTGGGCTTTATTTCCATGTT
TTTCTAAGTATGAGGGTCTCGCTGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCTTCATCTTCCTTCATGGACATGGATTTCAAAGCCCCTTTTGCGGAGGTGAAGGCAATTCTTGAAGGGCTGCAAATGGCTAAATCGCTTGGTTGTGGAAAAGT
AGTAATTGAATCTGATTGTGCTCAAGCGGTGAAATGTGTGTCAAGGCGTAATGAGGTTTGGGGTAAGCTGGAGCCTGTTATTGAAGACATTTGGGCTTTATTTCCATGTT
TTTCTAAGTATGAGGGTCTCGCTGTATAG
Protein sequenceShow/hide protein sequence
MGASSSFMDMDFKAPFAEVKAILEGLQMAKSLGCGKVVIESDCAQAVKCVSRRNEVWGKLEPVIEDIWALFPCFSKYEGLAV